RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	OXA1	P39952	402 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	YER076C	P40049	302 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	AZF1	P41696	914 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	BAT2	P47176	376 aa	Known RBP	4.83	□□□□□ -1.64
DBP9	YLR276C	CAB4	P53332	305 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	YNL140C	P53910	189 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	APS2	Q00381	147 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	NUP53	Q03790	475 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	YMR082C	Q04276	118 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	SPG3	Q04398	127 aa	Predicted RBP	4.83	□□□□□ -1.64
DBP9	YLR276C	POC4	Q12245	148 aa	Predicted RBP	4.83	□□□□□ -1.64
DBP9	YLR276C	YIL102C-A	Q2V2P5	75 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	YCR024C-B	Q3E7Z8	88 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	URA5	P13298	226 aa	Known RBP	4.82	□□□□□ -1.64
DBP9	YLR276C	YGL010W	P25338	174 aa		4.82	□□□□□ -1.64
DBP9	YLR276C	YCR025C	P25352	136 aa		4.82	□□□□□ -1.64
DBP9	YLR276C	ARO4	P32449	370 aa	Known RBP	4.82	□□□□□ -1.64
DBP9	YLR276C	FYV4	P38783	130 aa	Predicted RBP	4.82	□□□□□ -1.64
DBP9	YLR276C	GRX8	Q05926	109 aa		4.82	□□□□□ -1.64
DBP9	YLR276C	YDL218W	Q07629	317 aa		4.82	□□□□□ -1.64
DBP9	YLR276C	YBL112C	Q3E7Y4	105 aa		4.82	□□□□□ -1.64
DBP9	YLR276C	YPS1	P32329	569 aa		4.81	□□□□□ -1.64
DBP9	YLR276C	AGA2	P32781	87 aa		4.81	□□□□□ -1.64
DBP9	YLR276C	YKR070W	P36151	352 aa	Known RBP	4.81	□□□□□ -1.64
DBP9	YLR276C	MIC12	P38341	106 aa		4.81	□□□□□ -1.64
DBP9	YLR276C	BTT1	P40314	149 aa	Predicted RBP	4.81	□□□□□ -1.64
DBP9	YLR276C	YIL169C	P40442	995 aa		4.81	□□□□□ -1.64
DBP9	YLR276C	PAM18	Q07914	168 aa		4.81	□□□□□ -1.64
DBP9	YLR276C	SPO24	Q3E752	67 aa		4.81	□□□□□ -1.64
DBP9	YLR276C	OPI3	P05375	206 aa		4.81	□□□□□ -1.64
DBP9	YLR276C	RPS16A	P0CX51	143 aa	Known RBP	4.81	□□□□□ -1.64
DBP9	YLR276C	RPS16B	P0CX52	143 aa	Known RBP	4.81	□□□□□ -1.64
DBP9	YLR276C	PCL1	P24867	279 aa		4.81	□□□□□ -1.64
DBP9	YLR276C	SPS18	P32572	300 aa		4.81	□□□□□ -1.64
DBP9	YLR276C	GPX1	P36014	167 aa		4.81	□□□□□ -1.64
DBP9	YLR276C	YER079W	P40052	210 aa	Known RBP	4.81	□□□□□ -1.64
DBP9	YLR276C	ARC18	Q05933	178 aa	Known RBP	4.81	□□□□□ -1.64
DBP9	YLR276C	FMP49	A0A023PZB3	126 aa		4.8	□□□□□ -1.64
DBP9	YLR276C	RPL27A	P0C2H6	136 aa	Known RBP	4.8	□□□□□ -1.64
DBP9	YLR276C	RPL27B	P0C2H7	136 aa	Known RBP	4.8	□□□□□ -1.64
DBP9	YLR276C	YER039C-A	P0CD97	72 aa		4.8	□□□□□ -1.64
DBP9	YLR276C	RPB8	P20436	146 aa		4.8	□□□□□ -1.64
DBP9	YLR276C	YEL073C	P39974	107 aa		4.8	□□□□□ -1.64
DBP9	YLR276C	ERG28	P40030	148 aa		4.8	□□□□□ -1.64
DBP9	YLR276C	YJL213W	P40896	331 aa		4.8	□□□□□ -1.64
DBP9	YLR276C	YDL186W	P48568	277 aa		4.8	□□□□□ -1.64
DBP9	YLR276C	SCS3	P53012	380 aa		4.8	□□□□□ -1.64
DBP9	YLR276C	SUN4	P53616	420 aa		4.8	□□□□□ -1.64
DBP9	YLR276C	GRH1	Q04410	372 aa	Known RBP	4.8	□□□□□ -1.64
DBP9	YLR276C	NAT3	Q06504	195 aa		4.8	□□□□□ -1.64
DBP9	YLR276C	JID1	Q12350	301 aa		4.8	□□□□□ -1.64
DBP9	YLR276C	COA2	Q3E823	68 aa		4.8	□□□□□ -1.64
DBP9	YLR276C	CYC3	P06182	269 aa		4.79	□□□□□ -1.64
DBP9	YLR276C	POX1	P13711	748 aa		4.79	□□□□□ -1.64
DBP9	YLR276C	AHT1	P29589	182 aa		4.79	□□□□□ -1.64
DBP9	YLR276C	YKL071W	P36086	256 aa		4.79	□□□□□ -1.64
DBP9	YLR276C	SWD2	P36104	329 aa	Predicted RBP	4.79	□□□□□ -1.64
DBP9	YLR276C	BXI1	P48558	297 aa		4.79	□□□□□ -1.64
DBP9	YLR276C	FCY22	Q12119	530 aa		4.79	□□□□□ -1.64
DBP9	YLR276C	USB1	Q12208	290 aa	Known RBP	4.79	□□□□□ -1.64
DBP9	YLR276C	PEX11	Q12462	236 aa		4.79	□□□□□ -1.64
DBP9	YLR276C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
DBP9	YLR276C	ECM14	P38836	430 aa		4.78	□□□□□ -1.64
DBP9	YLR276C	SRP14	P38985	146 aa		4.78	□□□□□ -1.64
DBP9	YLR276C	OST2	P46964	130 aa		4.78	□□□□□ -1.64
DBP9	YLR276C	SFH5	P47008	294 aa		4.78	□□□□□ -1.64
DBP9	YLR276C	TOS2	P50078	622 aa		4.78	□□□□□ -1.64
DBP9	YLR276C	TRM112	P53738	135 aa	Predicted RBP	4.78	□□□□□ -1.64
DBP9	YLR276C	UBC7	Q02159	165 aa		4.78	□□□□□ -1.64
DBP9	YLR276C	YTH1	Q06102	208 aa	Predicted RBP	4.78	□□□□□ -1.64
DBP9	YLR276C	MRS1	P07266	363 aa		4.78	□□□□□ -1.64
DBP9	YLR276C	RPS28B	P0C0X0	67 aa	Known RBP	4.78	□□□□□ -1.64
DBP9	YLR276C	HMRA1	P0CY11	126 aa		4.78	□□□□□ -1.64
DBP9	YLR276C	KKQ8	P36004	724 aa		4.78	□□□□□ -1.64
DBP9	YLR276C	ATX1	P38636	73 aa		4.78	□□□□□ -1.64
DBP9	YLR276C	YIR016W	P40572	265 aa		4.78	□□□□□ -1.64
DBP9	YLR276C	DGA1	Q08650	418 aa		4.78	□□□□□ -1.64
DBP9	YLR276C	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.78	□□□□□ -1.64
DBP9	YLR276C	RPL18A	P0CX49	186 aa	Known RBP	4.77	□□□□□ -1.65
DBP9	YLR276C	RPL18B	P0CX50	186 aa	Known RBP	4.77	□□□□□ -1.65
DBP9	YLR276C	SPO13	P23624	291 aa		4.77	□□□□□ -1.65
DBP9	YLR276C	CSE2	P33308	149 aa		4.77	□□□□□ -1.65
DBP9	YLR276C	YKL097C	P34245	136 aa		4.77	□□□□□ -1.65
DBP9	YLR276C	YHL026C	P38740	315 aa		4.77	□□□□□ -1.65
DBP9	YLR276C	PCP1	P53259	346 aa		4.77	□□□□□ -1.65
DBP9	YLR276C	YRA1	Q12159	226 aa	Known RBP	4.77	□□□□□ -1.65
DBP9	YLR276C	ATG40	Q99325	256 aa		4.77	□□□□□ -1.65
DBP9	YLR276C	YBR121C-A	P0C5L4	52 aa		4.76	□□□□□ -1.65
DBP9	YLR276C	SGE1	P33335	543 aa		4.76	□□□□□ -1.65
DBP9	YLR276C	TIR2	P33890	251 aa		4.76	□□□□□ -1.65
DBP9	YLR276C	PAM17	P36147	197 aa		4.76	□□□□□ -1.65
DBP9	YLR276C	YJL118W	P47022	219 aa		4.76	□□□□□ -1.65
DBP9	YLR276C	YIP1	P53039	248 aa		4.76	□□□□□ -1.65
DBP9	YLR276C	RIM9	Q04734	239 aa		4.76	□□□□□ -1.65
DBP9	YLR276C	YPR098C	Q06089	161 aa		4.76	□□□□□ -1.65
DBP9	YLR276C	YAR066W	P0CX18	203 aa		4.76	□□□□□ -1.65
DBP9	YLR276C	YHR214W	P0CX19	203 aa		4.76	□□□□□ -1.65
DBP9	YLR276C	FCY2	P17064	533 aa		4.76	□□□□□ -1.65
DBP9	YLR276C	SHB17	P36136	271 aa	Known RBP	4.76	□□□□□ -1.65
DBP9	YLR276C	TRM7	P38238	310 aa	Known RBP	4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 102.6 ms