RNA–Protein interactions for RNA: YLR182W

SWI6, Transcript of Transcription cofactor, yeast

Gene SWI6, Length 2,412 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWI6	YLR182W	ETR1	P38071	380 aa		0.62	□□□□□ -2.31
SWI6	YLR182W	YHL018W	P38744	120 aa	Predicted RBP	0.62	□□□□□ -2.31
SWI6	YLR182W	RIO2	P40160	425 aa	Known RBP	0.62	□□□□□ -2.31
SWI6	YLR182W	UBC12	P52491	188 aa		0.62	□□□□□ -2.31
SWI6	YLR182W	EMC4	P53073	190 aa		0.62	□□□□□ -2.31
SWI6	YLR182W	HNT1	Q04344	158 aa	Known RBP	0.62	□□□□□ -2.31
SWI6	YLR182W	SWC7	Q06707	132 aa		0.62	□□□□□ -2.31
SWI6	YLR182W	RUD3	Q12234	484 aa	Known RBP	0.62	□□□□□ -2.31
SWI6	YLR182W	YKL018C-A	Q3E7A7	99 aa		0.62	□□□□□ -2.31
SWI6	YLR182W	TOR2	P32600	2474 aa	Known RBP	0.61	□□□□□ -2.31
SWI6	YLR182W	YHR212W-A	P0CX91	67 aa		0.61	□□□□□ -2.31
SWI6	YLR182W	PHO85	P17157	305 aa		0.61	□□□□□ -2.31
SWI6	YLR182W	RME1	P32338	300 aa	Known RBP	0.61	□□□□□ -2.31
SWI6	YLR182W	TRM5	P38793	499 aa		0.61	□□□□□ -2.31
SWI6	YLR182W	HPM1	P40481	377 aa		0.61	□□□□□ -2.31
SWI6	YLR182W	SKI6	P46948	246 aa	Predicted RBP	0.61	□□□□□ -2.31
SWI6	YLR182W	YJR111C	P47148	283 aa	Known RBP	0.61	□□□□□ -2.31
SWI6	YLR182W	YMR099C	Q03161	297 aa	Known RBP	0.61	□□□□□ -2.31
SWI6	YLR182W	CUE4	Q04201	117 aa	Predicted RBP	0.61	□□□□□ -2.31
SWI6	YLR182W	YOL131W	Q08270	108 aa		0.61	□□□□□ -2.31
SWI6	YLR182W	YPR202W	Q08993	238 aa		0.61	□□□□□ -2.31
SWI6	YLR182W	YLR053C	Q12026	108 aa		0.61	□□□□□ -2.31
SWI6	YLR182W	YDL180W	Q12301	547 aa		0.61	□□□□□ -2.31
SWI6	YLR182W	PST2	Q12335	198 aa	Known RBP	0.61	□□□□□ -2.31
SWI6	YLR182W	POL2	P21951	2222 aa	Known RBP	0.61	□□□□□ -2.31
SWI6	YLR182W	RIF1	P29539	1916 aa		0.61	□□□□□ -2.31
SWI6	YLR182W	YCR099C	P25657	155 aa		0.6	□□□□□ -2.31
SWI6	YLR182W	EDC3	P39998	551 aa	Known RBP	0.6	□□□□□ -2.31
SWI6	YLR182W	YEA4	P40004	342 aa		0.6	□□□□□ -2.31
SWI6	YLR182W	FIT2	Q08906	153 aa		0.6	□□□□□ -2.31
SWI6	YLR182W	YRA1	Q12159	226 aa	Known RBP	0.6	□□□□□ -2.31
SWI6	YLR182W	HFA1	P32874	2273 aa		0.6	□□□□□ -2.31
SWI6	YLR182W	MDN1	Q12019	4910 aa	Known RBP	0.6	□□□□□ -2.31
SWI6	YLR182W	TEL1	P38110	2787 aa		0.6	□□□□□ -2.31
SWI6	YLR182W	YAR023C	D6VPM8	179 aa		0.6	□□□□□ -2.31
SWI6	YLR182W	NSP1	P14907	823 aa	Known RBP	0.6	□□□□□ -2.31
SWI6	YLR182W	PAN3	P36102	679 aa	Predicted RBP	0.6	□□□□□ -2.31
SWI6	YLR182W	YEL028W	P39989	153 aa		0.6	□□□□□ -2.31
SWI6	YLR182W	SER2	P42941	309 aa		0.6	□□□□□ -2.31
SWI6	YLR182W	PAM16	P42949	149 aa		0.6	□□□□□ -2.31
SWI6	YLR182W	TMA22	P47089	198 aa	Predicted RBP	0.6	□□□□□ -2.31
SWI6	YLR182W	GRX5	Q02784	150 aa		0.6	□□□□□ -2.31
SWI6	YLR182W	YLR422W	Q06409	1932 aa		0.6	□□□□□ -2.31
SWI6	YLR182W	SEN1	Q00416	2231 aa	Known RBP	0.6	□□□□□ -2.31
SWI6	YLR182W	MBF1	O14467	151 aa	Known RBP	0.59	□□□□□ -2.31
SWI6	YLR182W	RPB4	P20433	221 aa	Predicted RBP	0.59	□□□□□ -2.31
SWI6	YLR182W	YCR090C	P25654	182 aa	Known RBP	0.59	□□□□□ -2.31
SWI6	YLR182W	AIM18	P38884	321 aa		0.59	□□□□□ -2.31
SWI6	YLR182W	RFC4	P40339	323 aa	Known RBP	0.59	□□□□□ -2.31
SWI6	YLR182W	YNL184C	P53876	108 aa		0.59	□□□□□ -2.31
SWI6	YLR182W	PIR1	Q03178	341 aa		0.59	□□□□□ -2.31
SWI6	YLR182W	YDR476C	Q03362	224 aa		0.59	□□□□□ -2.31
SWI6	YLR182W	CWC21	Q03375	135 aa	Known RBP	0.59	□□□□□ -2.31
SWI6	YLR182W	BNA7	Q04066	261 aa		0.59	□□□□□ -2.31
SWI6	YLR182W	YOL014W	Q08110	124 aa		0.59	□□□□□ -2.31
SWI6	YLR182W	IRC23	Q08416	157 aa		0.59	□□□□□ -2.31
SWI6	YLR182W	YOR342C	Q12182	319 aa		0.59	□□□□□ -2.31
SWI6	YLR182W	YLR046C	Q12253	270 aa		0.59	□□□□□ -2.31
SWI6	YLR182W	LAA1	P39526	2014 aa		0.59	□□□□□ -2.31
SWI6	YLR182W	BRR2	P32639	2163 aa	Known RBP	0.59	□□□□□ -2.31
SWI6	YLR182W	PRP8	P33334	2413 aa	Known RBP	0.59	□□□□□ -2.31
SWI6	YLR182W	MDM35	O60200	86 aa		0.59	□□□□□ -2.32
SWI6	YLR182W	TIR1	P10863	254 aa		0.59	□□□□□ -2.32
SWI6	YLR182W	SEN2	P16658	377 aa		0.59	□□□□□ -2.32
SWI6	YLR182W	CKS1	P20486	150 aa	Known RBP	0.59	□□□□□ -2.32
SWI6	YLR182W	TRX3	P25372	127 aa		0.59	□□□□□ -2.32
SWI6	YLR182W	RPC19	P28000	142 aa	Known RBP	0.59	□□□□□ -2.32
SWI6	YLR182W	LHP1	P33399	275 aa	Known RBP	0.59	□□□□□ -2.32
SWI6	YLR182W	YEL073C	P39974	107 aa		0.59	□□□□□ -2.32
SWI6	YLR182W	RPL37A	P49166	88 aa	Known RBP	0.59	□□□□□ -2.32
SWI6	YLR182W	ARO8	P53090	500 aa	Known RBP	0.59	□□□□□ -2.32
SWI6	YLR182W	HOP2	P53187	214 aa		0.59	□□□□□ -2.32
SWI6	YLR182W	THG1	P53215	237 aa	Known RBP	0.59	□□□□□ -2.32
SWI6	YLR182W	DAD4	P69851	72 aa		0.59	□□□□□ -2.32
SWI6	YLR182W	FMN1	Q03778	218 aa		0.59	□□□□□ -2.32
SWI6	YLR182W	PEX11	Q12462	236 aa		0.59	□□□□□ -2.32
SWI6	YLR182W	MOT1	P32333	1867 aa		0.59	□□□□□ -2.32
SWI6	YLR182W	SNF4	P12904	322 aa		0.58	□□□□□ -2.32
SWI6	YLR182W	YCL042W	P25572	119 aa		0.58	□□□□□ -2.32
SWI6	YLR182W	PEX34	P25584	144 aa		0.58	□□□□□ -2.32
SWI6	YLR182W	BUB2	P26448	306 aa	Predicted RBP	0.58	□□□□□ -2.32
SWI6	YLR182W	ADE1	P27616	306 aa		0.58	□□□□□ -2.32
SWI6	YLR182W	NTG1	P31378	399 aa		0.58	□□□□□ -2.32
SWI6	YLR182W	UBC6	P33296	250 aa	Predicted RBP	0.58	□□□□□ -2.32
SWI6	YLR182W	YHL042W	P38729	150 aa		0.58	□□□□□ -2.32
SWI6	YLR182W	MTW1	P39731	289 aa		0.58	□□□□□ -2.32
SWI6	YLR182W	MMS2	P53152	137 aa		0.58	□□□□□ -2.32
SWI6	YLR182W	MET31	Q03081	177 aa		0.58	□□□□□ -2.32
SWI6	YLR182W	SPC24	Q04477	213 aa		0.58	□□□□□ -2.32
SWI6	YLR182W	YPR174C	Q06616	221 aa	Predicted RBP	0.58	□□□□□ -2.32
SWI6	YLR182W	ATG10	Q07879	167 aa		0.58	□□□□□ -2.32
SWI6	YLR182W	FYV12	Q08559	129 aa		0.58	□□□□□ -2.32
SWI6	YLR182W	MDM32	Q12171	622 aa		0.58	□□□□□ -2.32
SWI6	YLR182W	EFG1	Q3E705	233 aa	Known RBP	0.58	□□□□□ -2.32
SWI6	YLR182W	COX8	P04039	78 aa		0.58	□□□□□ -2.32
SWI6	YLR182W	HAP2	P06774	265 aa		0.58	□□□□□ -2.32
SWI6	YLR182W	UBC8	P28263	218 aa		0.58	□□□□□ -2.32
SWI6	YLR182W	MPM1	P40364	252 aa		0.58	□□□□□ -2.32
SWI6	YLR182W	FMP32	P43557	207 aa		0.58	□□□□□ -2.32
SWI6	YLR182W	YFL019C	P43576	117 aa		0.58	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 49.1 ms