RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W SOK1P40317 901 aa0.77□□□□□ -2.29
SLX4YLR135W APQ12P40532 138 aa0.77□□□□□ -2.29
SLX4YLR135W ATG41Q12048 136 aa0.77□□□□□ -2.29
SLX4YLR135W MSB2P32334 1306 aa0.77□□□□□ -2.29
SLX4YLR135W TRM3Q07527 1436 aa0.76□□□□□ -2.29
SLX4YLR135W ATP5P09457 212 aa0.76□□□□□ -2.29
SLX4YLR135W YBL010CP32788 280 aa0.76□□□□□ -2.29
SLX4YLR135W CCS1P40202 249 aaKnown RBP0.76□□□□□ -2.29
SLX4YLR135W YGL235WP53071 178 aa0.76□□□□□ -2.29
SLX4YLR135W ORM1P53224 222 aa0.76□□□□□ -2.29
SLX4YLR135W YDR476CQ03362 224 aa0.76□□□□□ -2.29
SLX4YLR135W YDR102CQ03864 110 aa0.76□□□□□ -2.29
SLX4YLR135W UPS3Q04006 179 aa0.76□□□□□ -2.29
SLX4YLR135W RIM9Q04734 239 aa0.76□□□□□ -2.29
SLX4YLR135W YPD1Q07688 167 aa0.76□□□□□ -2.29
SLX4YLR135W YMR030W-AQ3E760 96 aa0.76□□□□□ -2.29
SLX4YLR135W RPL30P14120 105 aaKnown RBP0.76□□□□□ -2.29
SLX4YLR135W STF2P16965 84 aa0.76□□□□□ -2.29
SLX4YLR135W SRP102P36057 244 aaPredicted RBP0.76□□□□□ -2.29
SLX4YLR135W YEL028WP39989 153 aa0.76□□□□□ -2.29
SLX4YLR135W YFL065CP43539 102 aa0.76□□□□□ -2.29
SLX4YLR135W MOG1P47123 218 aa0.76□□□□□ -2.29
SLX4YLR135W ATG10Q07879 167 aa0.76□□□□□ -2.29
SLX4YLR135W PET20Q99373 253 aa0.76□□□□□ -2.29
SLX4YLR135W PBI2P0CT04 75 aaKnown RBP0.75□□□□□ -2.29
SLX4YLR135W INO4P13902 151 aa0.75□□□□□ -2.29
SLX4YLR135W LIP1Q03579 150 aa0.75□□□□□ -2.29
SLX4YLR135W YML079WQ03629 201 aa0.75□□□□□ -2.29
SLX4YLR135W YPR202WQ08993 238 aa0.75□□□□□ -2.29
SLX4YLR135W RPS28BP0C0X0 67 aaKnown RBP0.74□□□□□ -2.29
SLX4YLR135W SEN2P16658 377 aa0.74□□□□□ -2.29
SLX4YLR135W BUB2P26448 306 aaPredicted RBP0.74□□□□□ -2.29
SLX4YLR135W UBC8P28263 218 aa0.74□□□□□ -2.29
SLX4YLR135W ETR1P38071 380 aa0.74□□□□□ -2.29
SLX4YLR135W YPT31P38555 223 aaKnown RBP0.74□□□□□ -2.29
SLX4YLR135W YEL008WP40001 126 aa0.74□□□□□ -2.29
SLX4YLR135W YER181CP40097 107 aa0.74□□□□□ -2.29
SLX4YLR135W YNR064CP53750 290 aa0.74□□□□□ -2.29
SLX4YLR135W YPR114WQ06107 315 aa0.74□□□□□ -2.29
SLX4YLR135W RPS28AQ3E7X9 67 aaPredicted RBP0.74□□□□□ -2.29
SLX4YLR135W SPS2P08459 502 aa0.74□□□□□ -2.29
SLX4YLR135W PTC1P35182 281 aa0.74□□□□□ -2.29
SLX4YLR135W YGR269WP40326 108 aa0.74□□□□□ -2.29
SLX4YLR135W MOB1P40484 314 aa0.74□□□□□ -2.29
SLX4YLR135W FIP1P45976 327 aa0.74□□□□□ -2.29
SLX4YLR135W SBH2P52871 88 aa0.74□□□□□ -2.29
SLX4YLR135W PKR1Q03880 122 aaKnown RBP0.74□□□□□ -2.29
SLX4YLR135W YDR391CQ04170 232 aa0.74□□□□□ -2.29
SLX4YLR135W ELP6Q04868 273 aa0.74□□□□□ -2.29
SLX4YLR135W DUR1,2P32528 1835 aaKnown RBP0.74□□□□□ -2.29
SLX4YLR135W VAR1P02381 398 aa0.73□□□□□ -2.29
SLX4YLR135W AQY2P0CD90 149 aa0.73□□□□□ -2.29
SLX4YLR135W PEX34P25584 144 aa0.73□□□□□ -2.29
SLX4YLR135W AHT1P29589 182 aa0.73□□□□□ -2.29
SLX4YLR135W YBR242WP38331 238 aa0.73□□□□□ -2.29
SLX4YLR135W HTD2P38790 280 aaKnown RBP0.73□□□□□ -2.29
SLX4YLR135W IPI1P38803 334 aaPredicted RBP0.73□□□□□ -2.29
SLX4YLR135W GLC8P41818 229 aa0.73□□□□□ -2.29
SLX4YLR135W HHT1P61830 136 aa0.73□□□□□ -2.29
SLX4YLR135W COA3Q3E7B2 85 aa0.73□□□□□ -2.29
SLX4YLR135W CCC1P47818 322 aa0.73□□□□□ -2.29
SLX4YLR135W YDC1Q02896 317 aa0.73□□□□□ -2.29
SLX4YLR135W HRD1Q08109 551 aa0.73□□□□□ -2.29
SLX4YLR135W UIP4Q08926 304 aa0.73□□□□□ -2.29
SLX4YLR135W TAR1Q8TGM6 124 aa0.73□□□□□ -2.29
SLX4YLR135W RIF1P29539 1916 aa0.72□□□□□ -2.29
SLX4YLR135W RPS25BP0C0T4 108 aaKnown RBP0.72□□□□□ -2.29
SLX4YLR135W PET54P10834 293 aa0.72□□□□□ -2.29
SLX4YLR135W PHO13P19881 312 aa0.72□□□□□ -2.29
SLX4YLR135W MRS4P23500 304 aa0.72□□□□□ -2.29
SLX4YLR135W LSM1P47017 172 aaKnown RBP0.72□□□□□ -2.29
SLX4YLR135W YGL230CP53074 147 aa0.72□□□□□ -2.29
SLX4YLR135W RAV2Q03956 351 aa0.72□□□□□ -2.29
SLX4YLR135W YDL157CQ12082 118 aa0.72□□□□□ -2.29
SLX4YLR135W RPS25AQ3E792 108 aaPredicted RBP0.72□□□□□ -2.29
SLX4YLR135W MRPL15P36523 253 aa0.72□□□□□ -2.29
SLX4YLR135W MRPL24P36525 258 aaPredicted RBP0.72□□□□□ -2.29
SLX4YLR135W YEL067CP39978 195 aa0.72□□□□□ -2.29
SLX4YLR135W MET31Q03081 177 aa0.72□□□□□ -2.29
SLX4YLR135W YDL241WQ07738 123 aa0.72□□□□□ -2.29
SLX4YLR135W SCS22Q6Q595 175 aa0.72□□□□□ -2.29
SLX4YLR135W YOR1P53049 1477 aa0.71□□□□□ -2.3
SLX4YLR135W DDR48P18899 430 aaKnown RBP0.71□□□□□ -2.3
SLX4YLR135W YCL042WP25572 119 aa0.71□□□□□ -2.3
SLX4YLR135W SRP21P32342 167 aa0.71□□□□□ -2.3
SLX4YLR135W CIN5P40917 295 aa0.71□□□□□ -2.3
SLX4YLR135W RBL2P48606 106 aaKnown RBP0.71□□□□□ -2.3
SLX4YLR135W YPR203WQ08994 102 aa0.71□□□□□ -2.3
SLX4YLR135W SPA2P23201 1466 aaKnown RBP0.71□□□□□ -2.3
SLX4YLR135W ADE6P38972 1358 aaKnown RBP0.71□□□□□ -2.3
SLX4YLR135W YHR212W-AP0CX91 67 aa0.7□□□□□ -2.3
SLX4YLR135W CDC39P25655 2108 aaKnown RBP0.7□□□□□ -2.3
SLX4YLR135W RPC19P28000 142 aaKnown RBP0.7□□□□□ -2.3
SLX4YLR135W YJL218WP40892 196 aaKnown RBP0.7□□□□□ -2.3
SLX4YLR135W YJR015WP47090 510 aa0.7□□□□□ -2.3
SLX4YLR135W YGL193CP53097 103 aa0.7□□□□□ -2.3
SLX4YLR135W ATP19P81451 68 aa0.7□□□□□ -2.3
SLX4YLR135W NMA1Q06178 401 aaKnown RBP0.7□□□□□ -2.3
SLX4YLR135W RRT7Q07829 113 aa0.7□□□□□ -2.3
SLX4YLR135W UBR1P19812 1950 aa0.7□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 69.6 ms