RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W SOR1P35497 357 aaKnown RBP6.14□□□□□ -1.43
SNF7YLR025W MRPL11P36521 249 aaPredicted RBP6.14□□□□□ -1.43
SNF7YLR025W PSD1P39006 500 aa6.14□□□□□ -1.43
SNF7YLR025W DFG10P40526 253 aa6.14□□□□□ -1.43
SNF7YLR025W GPI2P46961 280 aa6.14□□□□□ -1.43
SNF7YLR025W YGL260WP53056 76 aa6.14□□□□□ -1.43
SNF7YLR025W YGL185CP53100 379 aa6.14□□□□□ -1.43
SNF7YLR025W LST7P53237 242 aa6.14□□□□□ -1.43
SNF7YLR025W POS5Q06892 414 aa6.14□□□□□ -1.43
SNF7YLR025W SOR2Q07786 357 aa6.14□□□□□ -1.43
SNF7YLR025W LDS2Q08218 356 aa6.14□□□□□ -1.43
SNF7YLR025W POM34Q12445 299 aa6.14□□□□□ -1.43
SNF7YLR025W MRS3P10566 314 aa6.13□□□□□ -1.43
SNF7YLR025W NOP1P15646 327 aaKnown RBP6.13□□□□□ -1.43
SNF7YLR025W HSP12P22943 109 aaKnown RBP6.13□□□□□ -1.43
SNF7YLR025W TOM40P23644 387 aaKnown RBP6.13□□□□□ -1.43
SNF7YLR025W SUA7P29055 345 aaPredicted RBP6.13□□□□□ -1.43
SNF7YLR025W RAD23P32628 398 aaKnown RBP6.13□□□□□ -1.43
SNF7YLR025W AVT5P38176 459 aa6.13□□□□□ -1.43
SNF7YLR025W RPB11P38902 120 aa6.13□□□□□ -1.43
SNF7YLR025W IRC25Q07951 179 aa6.13□□□□□ -1.43
SNF7YLR025W PAA1Q12447 191 aaKnown RBP6.13□□□□□ -1.43
SNF7YLR025W YMR316C-AI2HB70 103 aa6.12□□□□□ -1.43
SNF7YLR025W HTB1P02293 131 aaKnown RBP6.12□□□□□ -1.43
SNF7YLR025W PHD1P36093 366 aa6.12□□□□□ -1.43
SNF7YLR025W SAS2P40963 338 aa6.12□□□□□ -1.43
SNF7YLR025W DSK2P48510 373 aa6.12□□□□□ -1.43
SNF7YLR025W CRH1P53301 507 aa6.12□□□□□ -1.43
SNF7YLR025W CYT2Q00873 224 aa6.12□□□□□ -1.43
SNF7YLR025W MCH1Q07376 486 aa6.12□□□□□ -1.43
SNF7YLR025W NDE2Q07500 545 aa6.12□□□□□ -1.43
SNF7YLR025W YOR105WQ08504 108 aa6.12□□□□□ -1.43
SNF7YLR025W TMA17Q12513 150 aa6.12□□□□□ -1.43
SNF7YLR025W CSF1Q12150 2958 aa6.12□□□□□ -1.43
SNF7YLR025W YIP1P53039 248 aa6.11□□□□□ -1.43
SNF7YLR025W SEN15Q04675 128 aa6.11□□□□□ -1.43
SNF7YLR025W YPL278CQ08990 100 aa6.11□□□□□ -1.43
SNF7YLR025W YDL009CQ12210 107 aa6.11□□□□□ -1.43
SNF7YLR025W RNA15P25299 296 aaPredicted RBP6.1□□□□□ -1.43
SNF7YLR025W FPR2P32472 135 aa6.1□□□□□ -1.43
SNF7YLR025W YIL163CP40448 117 aa6.1□□□□□ -1.43
SNF7YLR025W SGN1P40561 250 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
SNF7YLR025W YFL051CP43552 160 aa6.1□□□□□ -1.43
SNF7YLR025W YJL163CP46996 555 aa6.1□□□□□ -1.43
SNF7YLR025W YHP1Q04116 353 aa6.1□□□□□ -1.43
SNF7YLR025W GAT3Q07928 141 aa6.1□□□□□ -1.43
SNF7YLR025W YNR034W-AQ3E841 98 aa6.1□□□□□ -1.43
SNF7YLR025W PIS1P06197 220 aaKnown RBP6.09□□□□□ -1.43
SNF7YLR025W FUN14P18411 198 aa6.09□□□□□ -1.43
SNF7YLR025W MRPL44P19956 98 aa6.09□□□□□ -1.43
SNF7YLR025W YBL071CP38185 102 aa6.09□□□□□ -1.43
SNF7YLR025W YGP1P38616 354 aaKnown RBP6.09□□□□□ -1.43
SNF7YLR025W ECM14P38836 430 aa6.09□□□□□ -1.43
SNF7YLR025W YGR149WP48236 432 aa6.09□□□□□ -1.43
SNF7YLR025W UBC11P52492 156 aa6.09□□□□□ -1.43
SNF7YLR025W ERV14P53173 138 aa6.09□□□□□ -1.43
SNF7YLR025W COX18P53239 316 aa6.09□□□□□ -1.43
SNF7YLR025W YNR064CP53750 290 aa6.09□□□□□ -1.43
SNF7YLR025W YNR071CP53757 342 aa6.09□□□□□ -1.43
SNF7YLR025W YNL046WP53956 172 aa6.09□□□□□ -1.43
SNF7YLR025W SED1Q01589 338 aa6.09□□□□□ -1.43
SNF7YLR025W STD1Q02794 444 aa6.09□□□□□ -1.43
SNF7YLR025W SDH7Q04401 133 aa6.09□□□□□ -1.43
SNF7YLR025W GEP5Q12393 293 aa6.09□□□□□ -1.43
SNF7YLR025W YIL134C-AQ45U18 67 aa6.09□□□□□ -1.43
SNF7YLR025W YMR105W-AQ8TGS8 64 aa6.09□□□□□ -1.43
SNF7YLR025W YLR302CO13544 120 aa6.08□□□□□ -1.44
SNF7YLR025W PMU1P36069 295 aa6.08□□□□□ -1.44
SNF7YLR025W YHL037CP38733 133 aa6.08□□□□□ -1.44
SNF7YLR025W CTR2P38865 189 aa6.08□□□□□ -1.44
SNF7YLR025W YAR068WP39564 161 aa6.08□□□□□ -1.44
SNF7YLR025W YJL118WP47022 219 aa6.08□□□□□ -1.44
SNF7YLR025W YTH1Q06102 208 aaPredicted RBP6.08□□□□□ -1.44
SNF7YLR025W SPS18P32572 300 aa6.07□□□□□ -1.44
SNF7YLR025W ARR2Q06597 130 aa6.07□□□□□ -1.44
SNF7YLR025W STP4Q07351 490 aa6.07□□□□□ -1.44
SNF7YLR025W FYV7Q12247 151 aa6.07□□□□□ -1.44
SNF7YLR025W YCL001W-BQ96VH2 84 aa6.07□□□□□ -1.44
SNF7YLR025W RPI1P23250 407 aaKnown RBP6.06□□□□□ -1.44
SNF7YLR025W DAL80P26343 269 aa6.06□□□□□ -1.44
SNF7YLR025W YHR173CP38864 112 aa6.06□□□□□ -1.44
SNF7YLR025W OST3P48439 350 aa6.06□□□□□ -1.44
SNF7YLR025W COX2P00410 251 aa6.05□□□□□ -1.44
SNF7YLR025W POR1P04840 283 aaKnown RBP6.05□□□□□ -1.44
SNF7YLR025W ILV5P06168 395 aaKnown RBP6.05□□□□□ -1.44
SNF7YLR025W IES6P32617 166 aa6.05□□□□□ -1.44
SNF7YLR025W LST8P41318 303 aa6.05□□□□□ -1.44
SNF7YLR025W YOR029WQ12243 111 aa6.05□□□□□ -1.44
SNF7YLR025W JID1Q12350 301 aa6.05□□□□□ -1.44
SNF7YLR025W RPS22BQ3E7Y3 130 aaKnown RBP6.05□□□□□ -1.44
SNF7YLR025W SOD1P00445 154 aaKnown RBP6.04□□□□□ -1.44
SNF7YLR025W SFT2P38166 215 aa6.04□□□□□ -1.44
SNF7YLR025W DOG2P38773 246 aa6.04□□□□□ -1.44
SNF7YLR025W DOG1P38774 246 aa6.04□□□□□ -1.44
SNF7YLR025W BDH1P39714 382 aa6.04□□□□□ -1.44
SNF7YLR025W MRX11Q03079 207 aa6.04□□□□□ -1.44
SNF7YLR025W WIP1Q2V2P8 89 aa6.04□□□□□ -1.44
SNF7YLR025W HMRA1P0CY11 126 aa6.03□□□□□ -1.44
SNF7YLR025W CUP2P15315 225 aa6.03□□□□□ -1.44
SNF7YLR025W PHO85P17157 305 aa6.03□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms