RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK1	YLR006C	TAD3	Q9URQ3	322 aa		4.9	□□□□□ -1.62
SSK1	YLR006C	YAL064W-B	O13512	126 aa		4.9	□□□□□ -1.63
SSK1	YLR006C	SUN4	P53616	420 aa		4.9	□□□□□ -1.63
SSK1	YLR006C	TVP18	Q04767	167 aa		4.9	□□□□□ -1.63
SSK1	YLR006C	GAT3	Q07928	141 aa		4.9	□□□□□ -1.63
SSK1	YLR006C	YOR376W	Q08900	122 aa		4.9	□□□□□ -1.63
SSK1	YLR006C	YCR075W-A	Q3E830	75 aa		4.9	□□□□□ -1.63
SSK1	YLR006C	YEA4	P40004	342 aa		4.89	□□□□□ -1.63
SSK1	YLR006C	SPC25	P40014	221 aa		4.89	□□□□□ -1.63
SSK1	YLR006C	RPL13B	P40212	199 aa	Known RBP	4.89	□□□□□ -1.63
SSK1	YLR006C	SIM1	P40472	476 aa		4.89	□□□□□ -1.63
SSK1	YLR006C	GNA1	P43577	159 aa	Predicted RBP	4.89	□□□□□ -1.63
SSK1	YLR006C	TPP1	Q03796	238 aa		4.89	□□□□□ -1.63
SSK1	YLR006C	YDR415C	Q04033	374 aa	Predicted RBP	4.89	□□□□□ -1.63
SSK1	YLR006C	SEN15	Q04675	128 aa		4.89	□□□□□ -1.63
SSK1	YLR006C	RDL2	Q08742	149 aa	Known RBP	4.89	□□□□□ -1.63
SSK1	YLR006C	RPL13A	Q12690	199 aa	Predicted RBP	4.89	□□□□□ -1.63
SSK1	YLR006C	CLB6	P32943	380 aa		4.88	□□□□□ -1.63
SSK1	YLR006C	YBR013C	P38215	129 aa		4.88	□□□□□ -1.63
SSK1	YLR006C	YIL086C	P40503	102 aa		4.88	□□□□□ -1.63
SSK1	YLR006C	XPT1	P47165	209 aa		4.88	□□□□□ -1.63
SSK1	YLR006C	YGR219W	P53307	113 aa		4.88	□□□□□ -1.63
SSK1	YLR006C	DUG3	P53871	357 aa		4.88	□□□□□ -1.63
SSK1	YLR006C	HUT1	Q12520	339 aa		4.88	□□□□□ -1.63
SSK1	YLR006C	GLC7	P32598	312 aa	Known RBP	4.88	□□□□□ -1.63
SSK1	YLR006C	ERV15	P38312	142 aa		4.88	□□□□□ -1.63
SSK1	YLR006C	FLO5	P38894	1075 aa		4.88	□□□□□ -1.63
SSK1	YLR006C	YND1	P40009	630 aa		4.88	□□□□□ -1.63
SSK1	YLR006C	BLM10	P43583	2143 aa		4.88	□□□□□ -1.63
SSK1	YLR006C	UBC13	P52490	153 aa		4.88	□□□□□ -1.63
SSK1	YLR006C	COF1	Q03048	143 aa	Known RBP	4.88	□□□□□ -1.63
SSK1	YLR006C	YMR317W	Q04893	1140 aa		4.88	□□□□□ -1.63
SSK1	YLR006C	RFM1	Q12192	310 aa		4.88	□□□□□ -1.63
SSK1	YLR006C	FAS1	P07149	2051 aa	Known RBP	4.88	□□□□□ -1.63
SSK1	YLR006C	CDC39	P25655	2108 aa	Known RBP	4.87	□□□□□ -1.63
SSK1	YLR006C	SEC4	P07560	215 aa	Known RBP	4.87	□□□□□ -1.63
SSK1	YLR006C	RPL14A	P36105	138 aa	Known RBP	4.87	□□□□□ -1.63
SSK1	YLR006C	YKR070W	P36151	352 aa	Known RBP	4.87	□□□□□ -1.63
SSK1	YLR006C	YBL081W	P38180	368 aa	Known RBP	4.87	□□□□□ -1.63
SSK1	YLR006C	YBR292C	P38357	123 aa		4.87	□□□□□ -1.63
SSK1	YLR006C	RPL14B	P38754	138 aa	Known RBP	4.87	□□□□□ -1.63
SSK1	YLR006C	LCB3	P47013	409 aa		4.87	□□□□□ -1.63
SSK1	YLR006C	YGL262W	P53054	175 aa		4.87	□□□□□ -1.63
SSK1	YLR006C	DIG2	Q03373	323 aa	Known RBP	4.87	□□□□□ -1.63
SSK1	YLR006C	YPR098C	Q06089	161 aa		4.87	□□□□□ -1.63
SSK1	YLR006C	YLR118C	Q12354	227 aa		4.87	□□□□□ -1.63
SSK1	YLR006C	SWM1	Q12379	170 aa		4.87	□□□□□ -1.63
SSK1	YLR006C	YHR214C-E	Q8TGK0	99 aa		4.87	□□□□□ -1.63
SSK1	YLR006C	SPT4	P32914	102 aa	Predicted RBP	4.87	□□□□□ -1.63
SSK1	YLR006C	GWT1	P47026	490 aa		4.87	□□□□□ -1.63
SSK1	YLR006C	ATP23	P53722	227 aa		4.87	□□□□□ -1.63
SSK1	YLR006C	YMR090W	Q04304	227 aa	Known RBP	4.87	□□□□□ -1.63
SSK1	YLR006C	HRI1	Q05905	244 aa	Known RBP	4.87	□□□□□ -1.63
SSK1	YLR006C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
SSK1	YLR006C	YPR063C	Q12160	140 aa		4.87	□□□□□ -1.63
SSK1	YLR006C	COA2	Q3E823	68 aa		4.87	□□□□□ -1.63
SSK1	YLR006C	ADH1	P00330	348 aa	Known RBP	4.86	□□□□□ -1.63
SSK1	YLR006C	YCR006C	P25350	157 aa		4.86	□□□□□ -1.63
SSK1	YLR006C	ERG2	P32352	222 aa		4.86	□□□□□ -1.63
SSK1	YLR006C	SCM4	P32564	187 aa		4.86	□□□□□ -1.63
SSK1	YLR006C	PMU1	P36069	295 aa		4.86	□□□□□ -1.63
SSK1	YLR006C	FLX1	P40464	311 aa		4.86	□□□□□ -1.63
SSK1	YLR006C	URM1	P40554	99 aa	Predicted RBP	4.86	□□□□□ -1.63
SSK1	YLR006C	PAU15	P40585	124 aa		4.86	□□□□□ -1.63
SSK1	YLR006C	BNS1	P50084	137 aa		4.86	□□□□□ -1.63
SSK1	YLR006C	YMR082C	Q04276	118 aa		4.86	□□□□□ -1.63
SSK1	YLR006C	FSH2	Q05015	223 aa		4.86	□□□□□ -1.63
SSK1	YLR006C	LIP2	Q06005	328 aa		4.86	□□□□□ -1.63
SSK1	YLR006C	YTH1	Q06102	208 aa	Predicted RBP	4.86	□□□□□ -1.63
SSK1	YLR006C	SEC16	P48415	2195 aa	Known RBP	4.86	□□□□□ -1.63
SSK1	YLR006C	COX5B	P00425	151 aa		4.85	□□□□□ -1.63
SSK1	YLR006C	SPO13	P23624	291 aa		4.85	□□□□□ -1.63
SSK1	YLR006C	CUP9	P41817	306 aa		4.85	□□□□□ -1.63
SSK1	YLR006C	KEG1	P43614	200 aa		4.85	□□□□□ -1.63
SSK1	YLR006C	YPS5	P53057	165 aa		4.85	□□□□□ -1.63
SSK1	YLR006C	CAB4	P53332	305 aa		4.85	□□□□□ -1.63
SSK1	YLR006C	RRS1	Q08746	203 aa	Known RBP	4.85	□□□□□ -1.63
SSK1	YLR006C	PHO85	P17157	305 aa		4.85	□□□□□ -1.63
SSK1	YLR006C	MST28	P39552	234 aa		4.85	□□□□□ -1.63
SSK1	YLR006C	WWM1	P43582	211 aa	Known RBP	4.85	□□□□□ -1.63
SSK1	YLR006C	RDL1	Q12305	139 aa	Known RBP	4.85	□□□□□ -1.63
SSK1	YLR006C	YHR139C-A	O13536	103 aa		4.84	□□□□□ -1.63
SSK1	YLR006C	RPL7A	P05737	244 aa	Known RBP	4.84	□□□□□ -1.63
SSK1	YLR006C	RPL30	P14120	105 aa	Known RBP	4.84	□□□□□ -1.63
SSK1	YLR006C	RPS2	P25443	254 aa	Known RBP	4.84	□□□□□ -1.63
SSK1	YLR006C	MOH1	P38191	138 aa		4.84	□□□□□ -1.63
SSK1	YLR006C	CSH1	P38287	376 aa		4.84	□□□□□ -1.63
SSK1	YLR006C	RSM10	Q03201	203 aa		4.84	□□□□□ -1.63
SSK1	YLR006C	YOR186W	Q08560	144 aa		4.84	□□□□□ -1.63
SSK1	YLR006C	NIP7	Q08962	181 aa	Known RBP	4.84	□□□□□ -1.63
SSK1	YLR006C	RPL7B	Q12213	244 aa	Known RBP	4.84	□□□□□ -1.63
SSK1	YLR006C	IZH2	Q12442	317 aa		4.84	□□□□□ -1.63
SSK1	YLR006C	GLT1	Q12680	2145 aa	Known RBP	4.84	□□□□□ -1.63
SSK1	YLR006C	YPR014C	Q6B0W2	109 aa		4.84	□□□□□ -1.63
SSK1	YLR006C	POL2	P21951	2222 aa	Known RBP	4.84	□□□□□ -1.63
SSK1	YLR006C	ALK2	P32789	676 aa	Predicted RBP	4.84	□□□□□ -1.64
SSK1	YLR006C	MRPS9	P38120	278 aa		4.84	□□□□□ -1.64
SSK1	YLR006C	SNU13	P39990	126 aa	Known RBP	4.84	□□□□□ -1.64
SSK1	YLR006C	REE1	P40893	198 aa		4.84	□□□□□ -1.64
SSK1	YLR006C	SMM1	P53720	384 aa	Known RBP	4.84	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 56.1 ms