RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C YDR102CQ03864 110 aa1.27□□□□□ -2.21
UBP11YKR098C YHP1Q04116 353 aa1.27□□□□□ -2.21
UBP11YKR098C YGL010WP25338 174 aa1.26□□□□□ -2.21
UBP11YKR098C YRA2P36036 203 aaKnown RBP RIP-Chip data1.26□□□□□ -2.21not detected
UBP11YKR098C RPL13BP40212 199 aaKnown RBP1.26□□□□□ -2.21
UBP11YKR098C MPM1P40364 252 aa1.26□□□□□ -2.21
UBP11YKR098C NSE4P43124 402 aa1.26□□□□□ -2.21
UBP11YKR098C ALB1P47019 175 aaPredicted RBP1.26□□□□□ -2.21
UBP11YKR098C CCC1P47818 322 aa1.26□□□□□ -2.21
UBP11YKR098C GRX5Q02784 150 aa1.26□□□□□ -2.21
UBP11YKR098C UPS3Q04006 179 aa1.26□□□□□ -2.21
UBP11YKR098C RPL13AQ12690 199 aaPredicted RBP1.26□□□□□ -2.21
UBP11YKR098C ACC1Q00955 2233 aaKnown RBP1.26□□□□□ -2.21
UBP11YKR098C QCR8P08525 94 aa1.25□□□□□ -2.21
UBP11YKR098C YOL162WP0CF19 215 aa1.25□□□□□ -2.21
UBP11YKR098C HTD2P38790 280 aaKnown RBP1.25□□□□□ -2.21
UBP11YKR098C FLX1P40464 311 aa1.25□□□□□ -2.21
UBP11YKR098C BAT2P47176 376 aaKnown RBP1.25□□□□□ -2.21
UBP11YKR098C PAC10P48363 199 aa1.25□□□□□ -2.21
UBP11YKR098C LIP1Q03579 150 aa1.25□□□□□ -2.21
UBP11YKR098C RRP17Q04031 235 aaPredicted RBP1.25□□□□□ -2.21
UBP11YKR098C YOR1P53049 1477 aa1.25□□□□□ -2.21
UBP11YKR098C GPA2P10823 449 aa1.25□□□□□ -2.21
UBP11YKR098C MAK31P23059 88 aa1.25□□□□□ -2.21
UBP11YKR098C RPB7P34087 171 aa1.25□□□□□ -2.21
UBP11YKR098C HPA3P39979 161 aa1.25□□□□□ -2.21
UBP11YKR098C YER181CP40097 107 aa1.25□□□□□ -2.21
UBP11YKR098C RAV2Q03956 351 aa1.25□□□□□ -2.21
UBP11YKR098C ACP1P32463 125 aa1.24□□□□□ -2.21
UBP11YKR098C CCS1P40202 249 aaKnown RBP1.24□□□□□ -2.21
UBP11YKR098C YJR015WP47090 510 aa1.24□□□□□ -2.21
UBP11YKR098C YGL193CP53097 103 aa1.24□□□□□ -2.21
UBP11YKR098C YPR114WQ06107 315 aa1.24□□□□□ -2.21
UBP11YKR098C YPD1Q07688 167 aa1.24□□□□□ -2.21
UBP11YKR098C ATG10Q07879 167 aa1.24□□□□□ -2.21
UBP11YKR098C UBR2Q07963 1872 aa1.24□□□□□ -2.21
UBP11YKR098C STF2P16965 84 aa1.24□□□□□ -2.21
UBP11YKR098C YPT31P38555 223 aaKnown RBP1.24□□□□□ -2.21
UBP11YKR098C YAP3P38749 330 aa1.24□□□□□ -2.21
UBP11YKR098C SOK1P40317 901 aa1.24□□□□□ -2.21
UBP11YKR098C YAE1P47118 141 aaPredicted RBP1.24□□□□□ -2.21
UBP11YKR098C YNR064CP53750 290 aa1.24□□□□□ -2.21
UBP11YKR098C YDR391CQ04170 232 aa1.24□□□□□ -2.21
UBP11YKR098C YMR320WQ04897 101 aa1.24□□□□□ -2.21
UBP11YKR098C YJL218WP40892 196 aaKnown RBP1.23□□□□□ -2.21
UBP11YKR098C CWC27Q02770 301 aa1.23□□□□□ -2.21
UBP11YKR098C RCE1Q03530 315 aa1.23□□□□□ -2.21
UBP11YKR098C YMR252CQ04814 134 aa1.23□□□□□ -2.21
UBP11YKR098C ELP6Q04868 273 aa1.23□□□□□ -2.21
UBP11YKR098C YNL146C-AQ3E7Z1 64 aa1.23□□□□□ -2.21
UBP11YKR098C UBR1P19812 1950 aa1.23□□□□□ -2.21
UBP11YKR098C MRS4P23500 304 aa1.23□□□□□ -2.21
UBP11YKR098C SPT14P32363 452 aa1.23□□□□□ -2.21
UBP11YKR098C YEL067CP39978 195 aa1.23□□□□□ -2.21
UBP11YKR098C HYR1P40581 163 aaKnown RBP1.23□□□□□ -2.21
UBP11YKR098C INO4P13902 151 aa1.22□□□□□ -2.21
UBP11YKR098C PHO13P19881 312 aa1.22□□□□□ -2.21
UBP11YKR098C FPR1P20081 114 aaKnown RBP1.22□□□□□ -2.21
UBP11YKR098C YBL010CP32788 280 aa1.22□□□□□ -2.21
UBP11YKR098C MRPL24P36525 258 aaPredicted RBP1.22□□□□□ -2.21
UBP11YKR098C MOB1P40484 314 aa1.22□□□□□ -2.21
UBP11YKR098C RBL2P48606 106 aaKnown RBP1.22□□□□□ -2.21
UBP11YKR098C YML079WQ03629 201 aa1.22□□□□□ -2.21
UBP11YKR098C YDL241WQ07738 123 aa1.22□□□□□ -2.21
UBP11YKR098C HRD1Q08109 551 aa1.22□□□□□ -2.21
UBP11YKR098C YMR030W-AQ3E760 96 aa1.22□□□□□ -2.21
UBP11YKR098C SPS2P08459 502 aa1.21□□□□□ -2.22
UBP11YKR098C YHL042WP38729 150 aa1.21□□□□□ -2.22
UBP11YKR098C YEL008WP40001 126 aa1.21□□□□□ -2.22
UBP11YKR098C YGR269WP40326 108 aa1.21□□□□□ -2.22
UBP11YKR098C UIP4Q08926 304 aa1.21□□□□□ -2.22
UBP11YKR098C ETR1P38071 380 aa1.21□□□□□ -2.22
UBP11YKR098C YGR201CP42936 225 aa1.21□□□□□ -2.22
UBP11YKR098C SEN2P16658 377 aa1.2□□□□□ -2.22
UBP11YKR098C DDR48P18899 430 aaKnown RBP1.2□□□□□ -2.22
UBP11YKR098C UBC7Q02159 165 aa1.2□□□□□ -2.22
UBP11YKR098C SPA2P23201 1466 aaKnown RBP1.2□□□□□ -2.22
UBP11YKR098C YDR366CP87287 132 aa1.2□□□□□ -2.22
UBP11YKR098C EST3Q03096 181 aa1.2□□□□□ -2.22
UBP11YKR098C YDL157CQ12082 118 aa1.2□□□□□ -2.22
UBP11YKR098C RIB3Q99258 208 aa1.2□□□□□ -2.22
UBP11YKR098C YFL065CP43539 102 aa1.19□□□□□ -2.22
UBP11YKR098C MZM1Q03429 123 aaPredicted RBP1.19□□□□□ -2.22
UBP11YKR098C RFU1Q08003 200 aa1.19□□□□□ -2.22
UBP11YKR098C CDC39P25655 2108 aaKnown RBP1.19□□□□□ -2.22
UBP11YKR098C HSP12P22943 109 aaKnown RBP1.18□□□□□ -2.22
UBP11YKR098C SRP21P32342 167 aa1.18□□□□□ -2.22
UBP11YKR098C CYC2P38909 366 aa1.18□□□□□ -2.22
UBP11YKR098C GPI2P46961 280 aa1.18□□□□□ -2.22
UBP11YKR098C GEP7P53171 287 aa1.18□□□□□ -2.22
UBP11YKR098C COF1Q03048 143 aaKnown RBP1.18□□□□□ -2.22
UBP11YKR098C CSN9Q03981 162 aa1.18□□□□□ -2.22
UBP11YKR098C TAR1Q8TGM6 124 aa1.18□□□□□ -2.22
UBP11YKR098C RIF1P29539 1916 aa1.18□□□□□ -2.22
UBP11YKR098C CIN5P40917 295 aa1.18□□□□□ -2.22
UBP11YKR098C MET31Q03081 177 aa1.18□□□□□ -2.22
UBP11YKR098C AVO2Q04749 426 aa1.18□□□□□ -2.22
UBP11YKR098C SPC2Q04969 178 aa1.18□□□□□ -2.22
UBP11YKR098C RRT7Q07829 113 aa1.18□□□□□ -2.22
UBP11YKR098C SCS22Q6Q595 175 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms