RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C RTG1P32607 177 aa4.68□□□□□ -1.66
VPS1YKR001C MRPL6P32904 214 aa4.68□□□□□ -1.66
VPS1YKR001C YNL198CP40166 100 aa4.68□□□□□ -1.66
VPS1YKR001C BUD8P41698 603 aa4.68□□□□□ -1.66
VPS1YKR001C SDT1P53078 280 aa4.68□□□□□ -1.66
VPS1YKR001C SCW4P53334 386 aaKnown RBP4.68□□□□□ -1.66
VPS1YKR001C VPS71Q03433 280 aa4.68□□□□□ -1.66
VPS1YKR001C MSS11Q03825 758 aa4.68□□□□□ -1.66
VPS1YKR001C RRG7Q08774 242 aaPredicted RBP4.68□□□□□ -1.66
VPS1YKR001C YDR029WQ12111 104 aa4.68□□□□□ -1.66
VPS1YKR001C YPL229WQ99395 206 aa4.68□□□□□ -1.66
VPS1YKR001C IGO2Q9P305 131 aa4.68□□□□□ -1.66
VPS1YKR001C HTA1P04911 132 aaKnown RBP4.67□□□□□ -1.66
VPS1YKR001C HTA2P04912 132 aa4.67□□□□□ -1.66
VPS1YKR001C DAT1P13483 248 aaKnown RBP4.67□□□□□ -1.66
VPS1YKR001C CTP1P38152 299 aa4.67□□□□□ -1.66
VPS1YKR001C YEL073CP39974 107 aa4.67□□□□□ -1.66
VPS1YKR001C CWP2P43497 92 aa4.67□□□□□ -1.66
VPS1YKR001C GEP7P53171 287 aa4.67□□□□□ -1.66
VPS1YKR001C VHT1P53241 593 aa4.67□□□□□ -1.66
VPS1YKR001C PDR17P53844 350 aa4.67□□□□□ -1.66
VPS1YKR001C RPL22BP56628 122 aaKnown RBP4.67□□□□□ -1.66
VPS1YKR001C YMR103CQ04436 120 aa4.67□□□□□ -1.66
VPS1YKR001C FIT3Q08907 204 aa4.67□□□□□ -1.66
VPS1YKR001C UTP23Q12339 254 aaKnown RBP4.67□□□□□ -1.66
VPS1YKR001C SWM1Q12379 170 aa4.67□□□□□ -1.66
VPS1YKR001C MSI1P13712 422 aa4.67□□□□□ -1.66
VPS1YKR001C MKK1P32490 508 aa4.67□□□□□ -1.66
VPS1YKR001C GCV3P39726 170 aaPredicted RBP4.67□□□□□ -1.66
VPS1YKR001C TOS2P50078 622 aa4.67□□□□□ -1.66
VPS1YKR001C YKR011CQ02209 353 aa4.67□□□□□ -1.66
VPS1YKR001C NUP100Q02629 959 aa4.67□□□□□ -1.66
VPS1YKR001C ROT1Q03691 256 aa4.67□□□□□ -1.66
VPS1YKR001C YLR049CQ12110 428 aa4.67□□□□□ -1.66
VPS1YKR001C SUS1Q6WNK7 96 aa4.67□□□□□ -1.66
VPS1YKR001C CYR1P08678 2026 aaKnown RBP4.67□□□□□ -1.66
VPS1YKR001C MRS1P07266 363 aa4.66□□□□□ -1.66
VPS1YKR001C RPL20AP0CX23 172 aaKnown RBP4.66□□□□□ -1.66
VPS1YKR001C RPL20BP0CX24 172 aaPredicted RBP4.66□□□□□ -1.66
VPS1YKR001C ATG27P46989 271 aa4.66□□□□□ -1.66
VPS1YKR001C TTI2P47168 421 aa4.66□□□□□ -1.66
VPS1YKR001C YMR317WQ04893 1140 aa4.66□□□□□ -1.66
VPS1YKR001C KEI1Q06346 221 aa4.66□□□□□ -1.66
VPS1YKR001C YDL218WQ07629 317 aa4.66□□□□□ -1.66
VPS1YKR001C IZH2Q12442 317 aa4.66□□□□□ -1.66
VPS1YKR001C YPL119C-AQ3E751 87 aa4.66□□□□□ -1.66
VPS1YKR001C RPL7AP05737 244 aaKnown RBP4.66□□□□□ -1.66
VPS1YKR001C YHR138CP38841 114 aaPredicted RBP4.66□□□□□ -1.66
VPS1YKR001C RPB11P38902 120 aa4.66□□□□□ -1.66
VPS1YKR001C YPL073CP40323 161 aa4.66□□□□□ -1.66
VPS1YKR001C BAT2P47176 376 aaKnown RBP4.66□□□□□ -1.66
VPS1YKR001C PGA1P53896 198 aa4.66□□□□□ -1.66
VPS1YKR001C YPL264CQ08980 353 aa4.66□□□□□ -1.66
VPS1YKR001C TOM40P23644 387 aaKnown RBP4.65□□□□□ -1.67
VPS1YKR001C SRP21P32342 167 aa4.65□□□□□ -1.67
VPS1YKR001C FIT1Q04433 528 aa4.65□□□□□ -1.67
VPS1YKR001C YDL157CQ12082 118 aa4.65□□□□□ -1.67
VPS1YKR001C YOR097CQ12274 175 aaPredicted RBP4.65□□□□□ -1.67
VPS1YKR001C YPS3Q12303 508 aa4.65□□□□□ -1.67
VPS1YKR001C MHF1Q3E835 90 aa4.65□□□□□ -1.67
VPS1YKR001C ECM12O13529 151 aa4.64□□□□□ -1.67
VPS1YKR001C PAU19P0CE85 124 aa4.64□□□□□ -1.67
VPS1YKR001C PAU21P0CE86 164 aa4.64□□□□□ -1.67
VPS1YKR001C PAU22P0CE87 164 aa4.64□□□□□ -1.67
VPS1YKR001C PAU3P25610 124 aa4.64□□□□□ -1.67
VPS1YKR001C YCR090CP25654 182 aaKnown RBP4.64□□□□□ -1.67
VPS1YKR001C MTR2P34232 184 aaKnown RBP4.64□□□□□ -1.67
VPS1YKR001C MST28P39552 234 aa4.64□□□□□ -1.67
VPS1YKR001C TIS11P47977 285 aa4.64□□□□□ -1.67
VPS1YKR001C NMA1Q06178 401 aaKnown RBP4.64□□□□□ -1.67
VPS1YKR001C MCA1Q08601 432 aa4.64□□□□□ -1.67
VPS1YKR001C JID1Q12350 301 aa4.64□□□□□ -1.67
VPS1YKR001C KAR4P25583 335 aa4.64□□□□□ -1.67
VPS1YKR001C HST4P53688 370 aa4.64□□□□□ -1.67
VPS1YKR001C RNH201P53942 307 aa4.64□□□□□ -1.67
VPS1YKR001C YPL039WQ03080 316 aa4.64□□□□□ -1.67
VPS1YKR001C YMR087WQ04299 284 aa4.64□□□□□ -1.67
VPS1YKR001C PBP4Q07362 185 aaKnown RBP4.64□□□□□ -1.67
VPS1YKR001C YDL007C-AQ2V2Q0 85 aa4.64□□□□□ -1.67
VPS1YKR001C POR1P04840 283 aaKnown RBP4.63□□□□□ -1.67
VPS1YKR001C YIL086CP40503 102 aa4.63□□□□□ -1.67
VPS1YKR001C YJL218WP40892 196 aaKnown RBP4.63□□□□□ -1.67
VPS1YKR001C YNL033WP53964 284 aa4.63□□□□□ -1.67
VPS1YKR001C YNL019CP53975 284 aa4.63□□□□□ -1.67
VPS1YKR001C LSM3P57743 89 aaKnown RBP4.63□□□□□ -1.67
VPS1YKR001C RPS2P25443 254 aaKnown RBP4.63□□□□□ -1.67
VPS1YKR001C ERG24P32462 438 aaKnown RBP4.63□□□□□ -1.67
VPS1YKR001C ATX1P38636 73 aa4.63□□□□□ -1.67
VPS1YKR001C CUP9P41817 306 aa4.63□□□□□ -1.67
VPS1YKR001C YMR166CQ03829 368 aa4.63□□□□□ -1.67
VPS1YKR001C DGA1Q08650 418 aa4.63□□□□□ -1.67
VPS1YKR001C SWD2P36104 329 aaPredicted RBP4.62□□□□□ -1.67
VPS1YKR001C MRPS9P38120 278 aa4.62□□□□□ -1.67
VPS1YKR001C MIX23P38162 196 aa4.62□□□□□ -1.67
VPS1YKR001C ASP1P38986 381 aaPredicted RBP4.62□□□□□ -1.67
VPS1YKR001C SPO73P40031 143 aa4.62□□□□□ -1.67
VPS1YKR001C CYB5P40312 120 aa4.62□□□□□ -1.67
VPS1YKR001C YFR054CP43622 192 aa4.62□□□□□ -1.67
VPS1YKR001C ERV2Q12284 196 aa4.62□□□□□ -1.67
VPS1YKR001C FAS1P07149 2051 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 61.5 ms