RNA–Protein interactions for RNA: YJR140C

HIR3, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR3, Length 4,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR3YJR140C MPC1P53157 130 aaKnown RBP1.12□□□□□ -2.23
HIR3YJR140C CWC27Q02770 301 aa1.12□□□□□ -2.23
HIR3YJR140C PAM17P36147 197 aa1.12□□□□□ -2.23
HIR3YJR140C HTD2P38790 280 aaKnown RBP1.12□□□□□ -2.23
HIR3YJR140C YNL200CP40165 246 aaKnown RBP1.12□□□□□ -2.23
HIR3YJR140C YGR017WP53210 297 aa1.12□□□□□ -2.23
HIR3YJR140C YNR064CP53750 290 aa1.12□□□□□ -2.23
HIR3YJR140C YGL010WP25338 174 aa1.12□□□□□ -2.23
HIR3YJR140C MPC3P53311 146 aa1.12□□□□□ -2.23
HIR3YJR140C COF1Q03048 143 aaKnown RBP1.12□□□□□ -2.23
HIR3YJR140C RPS25BP0C0T4 108 aaKnown RBP1.11□□□□□ -2.23
HIR3YJR140C UPS3Q04006 179 aa1.11□□□□□ -2.23
HIR3YJR140C RPS25AQ3E792 108 aaPredicted RBP1.11□□□□□ -2.23
HIR3YJR140C NSE4P43124 402 aa1.11□□□□□ -2.23
HIR3YJR140C YJL027CP47063 138 aaPredicted RBP1.11□□□□□ -2.23
HIR3YJR140C DAN1P47178 298 aa1.11□□□□□ -2.23
HIR3YJR140C YGL204CP53089 101 aa1.11□□□□□ -2.23
HIR3YJR140C YNR077CP53758 84 aa1.11□□□□□ -2.23
HIR3YJR140C DIG2Q03373 323 aaKnown RBP1.11□□□□□ -2.23
HIR3YJR140C YOR381W-AQ3E804 55 aa1.11□□□□□ -2.23
HIR3YJR140C FLX1P40464 311 aa1.11□□□□□ -2.23
HIR3YJR140C APS3P47064 194 aa1.11□□□□□ -2.23
HIR3YJR140C THG1P53215 237 aaKnown RBP1.11□□□□□ -2.23
HIR3YJR140C CNL1Q06333 122 aa1.11□□□□□ -2.23
HIR3YJR140C RPL2AP0CX45 254 aaKnown RBP1.11□□□□□ -2.23
HIR3YJR140C RPL2BP0CX46 254 aaKnown RBP1.11□□□□□ -2.23
HIR3YJR140C PRE1P22141 198 aaKnown RBP1.11□□□□□ -2.23
HIR3YJR140C HYR1P40581 163 aaKnown RBP1.11□□□□□ -2.23
HIR3YJR140C YDC1Q02896 317 aa1.11□□□□□ -2.23
HIR3YJR140C YOL162WP0CF19 215 aa1.1□□□□□ -2.23
HIR3YJR140C SUA7P29055 345 aaPredicted RBP1.1□□□□□ -2.23
HIR3YJR140C AHT1P29589 182 aa1.1□□□□□ -2.23
HIR3YJR140C YAE1P47118 141 aaPredicted RBP1.1□□□□□ -2.23
HIR3YJR140C YHP1Q04116 353 aa1.1□□□□□ -2.23
HIR3YJR140C YDL157CQ12082 118 aa1.1□□□□□ -2.23
HIR3YJR140C ADE6P38972 1358 aaKnown RBP1.1□□□□□ -2.23
HIR3YJR140C YGL041W-AP0C5N3 154 aa1.1□□□□□ -2.23
HIR3YJR140C SLM6P38343 150 aa1.1□□□□□ -2.23
HIR3YJR140C YHL042WP38729 150 aa1.1□□□□□ -2.23
HIR3YJR140C CIN5P40917 295 aa1.1□□□□□ -2.23
HIR3YJR140C GPI2P46961 280 aa1.1□□□□□ -2.23
HIR3YJR140C PST2Q12335 198 aaKnown RBP1.1□□□□□ -2.23
HIR3YJR140C FYV4P38783 130 aaPredicted RBP1.1□□□□□ -2.23
HIR3YJR140C YGR269WP40326 108 aa1.1□□□□□ -2.23
HIR3YJR140C ATG41Q12048 136 aa1.1□□□□□ -2.23
HIR3YJR140C STF2P16965 84 aa1.1□□□□□ -2.23
HIR3YJR140C SDH7Q04401 133 aa1.1□□□□□ -2.23
HIR3YJR140C CCH1P50077 2039 aa1.09□□□□□ -2.23
HIR3YJR140C COX8P04039 78 aa1.09□□□□□ -2.23
HIR3YJR140C RME1P32338 300 aaKnown RBP1.09□□□□□ -2.23
HIR3YJR140C RPB7P34087 171 aa1.09□□□□□ -2.23
HIR3YJR140C YPT31P38555 223 aaKnown RBP1.09□□□□□ -2.23
HIR3YJR140C YGL193CP53097 103 aa1.09□□□□□ -2.23
HIR3YJR140C GEP7P53171 287 aa1.09□□□□□ -2.23
HIR3YJR140C NKP2Q06162 153 aa1.09□□□□□ -2.23
HIR3YJR140C FLO9P39712 1322 aa1.09□□□□□ -2.23
HIR3YJR140C HSP12P22943 109 aaKnown RBP1.09□□□□□ -2.23
HIR3YJR140C SUI1P32911 108 aaKnown RBP1.09□□□□□ -2.23
HIR3YJR140C MRPL24P36525 258 aaPredicted RBP1.09□□□□□ -2.23
HIR3YJR140C LSM8P47093 109 aaKnown RBP1.09□□□□□ -2.23
HIR3YJR140C YDR102CQ03864 110 aa1.09□□□□□ -2.23
HIR3YJR140C SRP21P32342 167 aa1.09□□□□□ -2.24
HIR3YJR140C YHL018WP38744 120 aaPredicted RBP1.09□□□□□ -2.24
HIR3YJR140C YGR201CP42936 225 aa1.09□□□□□ -2.24
HIR3YJR140C UBC7Q02159 165 aa1.09□□□□□ -2.24
HIR3YJR140C YNL146C-AQ3E7Z1 64 aa1.09□□□□□ -2.24
HIR3YJR140C NHP6AP11632 93 aaKnown RBP1.08□□□□□ -2.24
HIR3YJR140C PHO13P19881 312 aa1.08□□□□□ -2.24
HIR3YJR140C UBC8P28263 218 aa1.08□□□□□ -2.24
HIR3YJR140C SPA2P23201 1466 aaKnown RBP1.08□□□□□ -2.24
HIR3YJR140C SHB17P36136 271 aaKnown RBP1.08□□□□□ -2.24
HIR3YJR140C CCS1P40202 249 aaKnown RBP1.08□□□□□ -2.24
HIR3YJR140C ORM1P53224 222 aa1.08□□□□□ -2.24
HIR3YJR140C KEI1Q06346 221 aa1.08□□□□□ -2.24
HIR3YJR140C ECM31P38122 312 aa1.08□□□□□ -2.24
HIR3YJR140C CYC2P38909 366 aa1.08□□□□□ -2.24
HIR3YJR140C YEL028WP39989 153 aa1.08□□□□□ -2.24
HIR3YJR140C FIP1P45976 327 aa1.08□□□□□ -2.24
HIR3YJR140C YPR114WQ06107 315 aa1.08□□□□□ -2.24
HIR3YJR140C NMA1Q06178 401 aaKnown RBP1.08□□□□□ -2.24
HIR3YJR140C SCS22Q6Q595 175 aa1.08□□□□□ -2.24
HIR3YJR140C YBR219CP38317 127 aa1.08□□□□□ -2.24
HIR3YJR140C YLR162WQ06235 118 aa1.08□□□□□ -2.24
HIR3YJR140C YPR202WQ08993 238 aa1.08□□□□□ -2.24
HIR3YJR140C VMA22P38784 181 aa1.07□□□□□ -2.24
HIR3YJR140C FMN1Q03778 218 aa1.07□□□□□ -2.24
HIR3YJR140C FPR1P20081 114 aaKnown RBP1.07□□□□□ -2.24
HIR3YJR140C BAT2P47176 376 aaKnown RBP1.07□□□□□ -2.24
HIR3YJR140C UPS1Q05776 175 aa1.07□□□□□ -2.24
HIR3YJR140C MRPL44P19956 98 aa1.07□□□□□ -2.24
HIR3YJR140C YNL019CP53975 284 aa1.07□□□□□ -2.24
HIR3YJR140C RIM9Q04734 239 aa1.07□□□□□ -2.24
HIR3YJR140C FCY1Q12178 158 aa1.07□□□□□ -2.24
HIR3YJR140C INO4P13902 151 aa1.07□□□□□ -2.24
HIR3YJR140C YKR045CP36138 183 aa1.07□□□□□ -2.24
HIR3YJR140C DYN2Q02647 92 aa1.07□□□□□ -2.24
HIR3YJR140C RNH202Q05635 350 aa1.07□□□□□ -2.24
HIR3YJR140C RAF1Q06891 181 aa1.07□□□□□ -2.24
HIR3YJR140C QCR8P08525 94 aa1.06□□□□□ -2.24
HIR3YJR140C GLC8P41818 229 aa1.06□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms