RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeastyeast

Gene URM1, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
URM1YIL008W YDR249CQ03787 373 aa0.58□□□□□ -2.32
URM1YIL008W AIM36Q03798 255 aa0.58□□□□□ -2.32
URM1YIL008W MIX14Q04341 121 aa0.58□□□□□ -2.32
URM1YIL008W YPR174CQ06616 221 aaPredicted RBP0.58□□□□□ -2.32
URM1YIL008W YLR036CQ07986 203 aa0.58□□□□□ -2.32
URM1YIL008W DDP1Q99321 188 aaKnown RBP0.58□□□□□ -2.32
URM1YIL008W QCR6P00127 147 aa0.57□□□□□ -2.32
URM1YIL008W YSF3P0C074 85 aaPredicted RBP0.57□□□□□ -2.32
URM1YIL008W BET1P22804 142 aa0.57□□□□□ -2.32
URM1YIL008W TRX3P25372 127 aa0.57□□□□□ -2.32
URM1YIL008W HSP150P32478 413 aa0.57□□□□□ -2.32
URM1YIL008W MSN4P33749 630 aa0.57□□□□□ -2.32
URM1YIL008W VPS51P36116 164 aa0.57□□□□□ -2.32
URM1YIL008W RMD6P39975 231 aa0.57□□□□□ -2.32
URM1YIL008W YER034WP40022 185 aaKnown RBP0.57□□□□□ -2.32
URM1YIL008W YIR020CP40575 100 aa0.57□□□□□ -2.32
URM1YIL008W YFL051CP43552 160 aa0.57□□□□□ -2.32
URM1YIL008W ALB1P47019 175 aaPredicted RBP0.57□□□□□ -2.32
URM1YIL008W SBH2P52871 88 aa0.57□□□□□ -2.32
URM1YIL008W YLR460CP54007 376 aa0.57□□□□□ -2.32
URM1YIL008W RRN5Q02983 363 aa0.57□□□□□ -2.32
URM1YIL008W RIM9Q04734 239 aa0.57□□□□□ -2.32
URM1YIL008W YDR278CQ05612 105 aa0.57□□□□□ -2.32
URM1YIL008W RAF1Q06891 181 aa0.57□□□□□ -2.32
URM1YIL008W YPR202WQ08993 238 aa0.57□□□□□ -2.32
URM1YIL008W YGR035W-AQ45U48 73 aa0.57□□□□□ -2.32
URM1YIL008W RPL27AP0C2H6 136 aaKnown RBP0.56□□□□□ -2.32
URM1YIL008W RPL35AP0CX84 120 aaKnown RBP0.56□□□□□ -2.32
URM1YIL008W RPL35BP0CX85 120 aaKnown RBP0.56□□□□□ -2.32
URM1YIL008W RPB3P16370 318 aaKnown RBP0.56□□□□□ -2.32
URM1YIL008W ATP15P21306 62 aa0.56□□□□□ -2.32
URM1YIL008W SEC14P24280 304 aaKnown RBP0.56□□□□□ -2.32
URM1YIL008W RAD51P25454 400 aa0.56□□□□□ -2.32
URM1YIL008W VMA6P32366 345 aaKnown RBP0.56□□□□□ -2.32
URM1YIL008W PTM1P32857 523 aa0.56□□□□□ -2.32
URM1YIL008W FES1P38260 290 aa0.56□□□□□ -2.32
URM1YIL008W AST2P39945 430 aaKnown RBP0.56□□□□□ -2.32
URM1YIL008W YGR050CP53231 118 aa0.56□□□□□ -2.32
URM1YIL008W NHP10Q03435 203 aa0.56□□□□□ -2.32
URM1YIL008W UIP4Q08926 304 aa0.56□□□□□ -2.32
URM1YIL008W RTR2Q12378 196 aa0.56□□□□□ -2.32
URM1YIL008W THP2O13539 261 aaKnown RBP0.55□□□□□ -2.32
URM1YIL008W YMR31P19955 123 aa0.55□□□□□ -2.32
URM1YIL008W RPB4P20433 221 aaPredicted RBP0.55□□□□□ -2.32
URM1YIL008W NSG1P38837 291 aa0.55□□□□□ -2.32
URM1YIL008W YER121WP40076 114 aa0.55□□□□□ -2.32
URM1YIL008W HYR1P40581 163 aaKnown RBP0.55□□□□□ -2.32
URM1YIL008W YRB1P41920 201 aaKnown RBP0.55□□□□□ -2.32
URM1YIL008W ADO1P47143 340 aaKnown RBP0.55□□□□□ -2.32
URM1YIL008W RPS12P48589 143 aaKnown RBP0.55□□□□□ -2.32
URM1YIL008W YNL140CP53910 189 aa0.55□□□□□ -2.32
URM1YIL008W SED1Q01589 338 aa0.55□□□□□ -2.32
URM1YIL008W NCE101Q02820 53 aa0.55□□□□□ -2.32
URM1YIL008W VPS71Q03433 280 aa0.55□□□□□ -2.32
URM1YIL008W YOL160WQ08321 113 aa0.55□□□□□ -2.32
URM1YIL008W GET4Q12125 312 aa0.55□□□□□ -2.32
URM1YIL008W RUD3Q12234 484 aaKnown RBP0.55□□□□□ -2.32
URM1YIL008W MHF1Q3E835 90 aa0.55□□□□□ -2.32
URM1YIL008W YFR032C-BQ8TGU2 87 aa0.55□□□□□ -2.32
URM1YIL008W RPL28P02406 149 aaKnown RBP0.54□□□□□ -2.32
URM1YIL008W RHO1P06780 209 aaKnown RBP0.54□□□□□ -2.32
URM1YIL008W SEC4P07560 215 aaKnown RBP0.54□□□□□ -2.32
URM1YIL008W GCN3P14741 305 aa0.54□□□□□ -2.32
URM1YIL008W APA2P22108 325 aa0.54□□□□□ -2.32
URM1YIL008W RPL24BP24000 155 aaKnown RBP0.54□□□□□ -2.32
URM1YIL008W MGT1P26188 188 aa0.54□□□□□ -2.32
URM1YIL008W CLG1P35190 452 aa0.54□□□□□ -2.32
URM1YIL008W YRA2P36036 203 aaKnown RBP RIP-Chip data0.54□□□□□ -2.32not detected
URM1YIL008W FIG1P38224 298 aa0.54□□□□□ -2.32
URM1YIL008W MIC12P38341 106 aa0.54□□□□□ -2.32
URM1YIL008W AIM2P39721 246 aa0.54□□□□□ -2.32
URM1YIL008W YPL073CP40323 161 aa0.54□□□□□ -2.32
URM1YIL008W RFC4P40339 323 aaKnown RBP0.54□□□□□ -2.32
URM1YIL008W GLR1P41921 483 aaKnown RBP0.54□□□□□ -2.32
URM1YIL008W FMP32P43557 207 aa0.54□□□□□ -2.32
URM1YIL008W SIP18P50263 79 aa0.54□□□□□ -2.32
URM1YIL008W EFM5P53200 248 aaKnown RBP0.54□□□□□ -2.32
URM1YIL008W MET31Q03081 177 aa0.54□□□□□ -2.32
URM1YIL008W CSN9Q03981 162 aa0.54□□□□□ -2.32
URM1YIL008W HPT1Q04178 221 aaKnown RBP0.54□□□□□ -2.32
URM1YIL008W PRP11Q07350 266 aaPredicted RBP0.54□□□□□ -2.32
URM1YIL008W GRE1Q08969 168 aa0.54□□□□□ -2.32
URM1YIL008W DAS2Q12084 232 aa0.54□□□□□ -2.32
URM1YIL008W YCL048W-AQ2V2Q2 79 aa0.54□□□□□ -2.32
URM1YIL008W YMR030W-AQ3E760 96 aa0.54□□□□□ -2.32
URM1YIL008W YCL012CQ8J0M4 134 aa0.54□□□□□ -2.32
URM1YIL008W YHR214C-EQ8TGK0 99 aa0.54□□□□□ -2.32
URM1YIL008W CMD1P06787 147 aaKnown RBP0.53□□□□□ -2.32
URM1YIL008W CBF1P17106 351 aa0.53□□□□□ -2.32
URM1YIL008W PHO13P19881 312 aa0.53□□□□□ -2.32
URM1YIL008W YCR090CP25654 182 aaKnown RBP0.53□□□□□ -2.32
URM1YIL008W RPS1AP33442 255 aaKnown RBP0.53□□□□□ -2.32
URM1YIL008W YCR087C-AP37263 153 aa0.53□□□□□ -2.32
URM1YIL008W YER085CP40058 173 aa0.53□□□□□ -2.32
URM1YIL008W YNR064CP53750 290 aa0.53□□□□□ -2.32
URM1YIL008W YMR252CQ04814 134 aa0.53□□□□□ -2.32
URM1YIL008W IRC19Q07843 230 aa0.53□□□□□ -2.32
URM1YIL008W FIT3Q08907 204 aa0.53□□□□□ -2.32
URM1YIL008W RPL39P04650 51 aa0.52□□□□□ -2.33
URM1YIL008W GCY1P14065 312 aaKnown RBP RIP-Chip data0.52□□□□□ -2.33not detected
Retrieved 100 of 5,963 RNA–protein pairs in 72.9 ms