RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W YOX1P34161 385 aa6.25□□□□□ -1.41
PEX28YHR150W PAM17P36147 197 aa6.25□□□□□ -1.41
PEX28YHR150W RPB11P38902 120 aa6.25□□□□□ -1.41
PEX28YHR150W PKR1Q03880 122 aaKnown RBP6.25□□□□□ -1.41
PEX28YHR150W MRL1Q06815 381 aa6.25□□□□□ -1.41
PEX28YHR150W POS5Q06892 414 aa6.25□□□□□ -1.41
PEX28YHR150W YPR014CQ6B0W2 109 aa6.25□□□□□ -1.41
PEX28YHR150W RPS23AP0CX29 145 aaKnown RBP6.25□□□□□ -1.41
PEX28YHR150W RPS23BP0CX30 145 aa6.25□□□□□ -1.41
PEX28YHR150W SUA7P29055 345 aaPredicted RBP6.25□□□□□ -1.41
PEX28YHR150W YBR090CP38253 122 aa6.25□□□□□ -1.41
PEX28YHR150W YFL051CP43552 160 aa6.25□□□□□ -1.41
PEX28YHR150W ATP5P09457 212 aa6.24□□□□□ -1.41
PEX28YHR150W SRP21P32342 167 aa6.24□□□□□ -1.41
PEX28YHR150W TCA17P32613 152 aa6.24□□□□□ -1.41
PEX28YHR150W GAT2P40209 560 aa6.24□□□□□ -1.41
PEX28YHR150W CDC40P40968 455 aaPredicted RBP6.24□□□□□ -1.41
PEX28YHR150W CPD1P53314 239 aa6.24□□□□□ -1.41
PEX28YHR150W SAE3P89114 91 aa6.24□□□□□ -1.41
PEX28YHR150W YDL085C-AQ3E7B7 68 aaKnown RBP6.24□□□□□ -1.41
PEX28YHR150W YLR302CO13544 120 aa6.23□□□□□ -1.41
PEX28YHR150W SOD1P00445 154 aaKnown RBP6.23□□□□□ -1.41
PEX28YHR150W GAR1P28007 205 aaKnown RBP6.23□□□□□ -1.41
PEX28YHR150W CPR5P35176 225 aa6.23□□□□□ -1.41
PEX28YHR150W BNA2P47125 453 aa6.23□□□□□ -1.41
PEX28YHR150W RPL9BP51401 191 aaKnown RBP6.23□□□□□ -1.41
PEX28YHR150W NAT5Q08689 176 aa6.23□□□□□ -1.41
PEX28YHR150W WTM2Q12206 467 aa6.23□□□□□ -1.41
PEX28YHR150W YCL001W-BQ96VH2 84 aa6.23□□□□□ -1.41
PEX28YHR150W TRA1P38811 3744 aa6.22□□□□□ -1.41
PEX28YHR150W RPL39P04650 51 aa6.22□□□□□ -1.41
PEX28YHR150W DFR1P07807 211 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
PEX28YHR150W CUP2P15315 225 aa6.22□□□□□ -1.41
PEX28YHR150W NOP1P15646 327 aaKnown RBP6.22□□□□□ -1.41
PEX28YHR150W TOM40P23644 387 aaKnown RBP6.22□□□□□ -1.41
PEX28YHR150W RAD23P32628 398 aaKnown RBP6.22□□□□□ -1.41
PEX28YHR150W YBR184WP38299 523 aa6.22□□□□□ -1.41
PEX28YHR150W YER134CP40081 178 aa6.22□□□□□ -1.41
PEX28YHR150W IZH1Q03419 316 aa6.22□□□□□ -1.41
PEX28YHR150W MCH1Q07376 486 aa6.22□□□□□ -1.41
PEX28YHR150W YCR024C-BQ3E7Z8 88 aa6.22□□□□□ -1.41
PEX28YHR150W NNK1P36003 928 aa6.22□□□□□ -1.41
PEX28YHR150W GLC8P41818 229 aa6.22□□□□□ -1.41
PEX28YHR150W YMR166CQ03829 368 aa6.22□□□□□ -1.41
PEX28YHR150W PIS1P06197 220 aaKnown RBP6.21□□□□□ -1.42
PEX28YHR150W RPI1P23250 407 aaKnown RBP6.21□□□□□ -1.42
PEX28YHR150W AME1P38313 324 aa6.21□□□□□ -1.42
PEX28YHR150W YER121WP40076 114 aa6.21□□□□□ -1.42
PEX28YHR150W YFL015CP43578 164 aa6.21□□□□□ -1.42
PEX28YHR150W PIR5P46999 287 aa6.21□□□□□ -1.42
PEX28YHR150W DUG3P53871 357 aa6.21□□□□□ -1.42
PEX28YHR150W YTH1Q06102 208 aaPredicted RBP6.21□□□□□ -1.42
PEX28YHR150W GAT3Q07928 141 aa6.21□□□□□ -1.42
PEX28YHR150W YHL037CP38733 133 aa6.2□□□□□ -1.42
PEX28YHR150W HUA1P40325 198 aa6.2□□□□□ -1.42
PEX28YHR150W SAS2P40963 338 aa6.2□□□□□ -1.42
PEX28YHR150W API2Q04413 109 aa6.2□□□□□ -1.42
PEX28YHR150W YOR029WQ12243 111 aa6.2□□□□□ -1.42
PEX28YHR150W HSP12P22943 109 aaKnown RBP6.19□□□□□ -1.42
PEX28YHR150W QRI5P32344 111 aa6.19□□□□□ -1.42
PEX28YHR150W SPC29P33419 253 aa6.19□□□□□ -1.42
PEX28YHR150W YAR068WP39564 161 aa6.19□□□□□ -1.42
PEX28YHR150W SED1Q01589 338 aa6.19□□□□□ -1.42
PEX28YHR150W RAV2Q03956 351 aa6.19□□□□□ -1.42
PEX28YHR150W MIG1P27705 504 aa6.19□□□□□ -1.42
PEX28YHR150W MIX23P38162 196 aa6.19□□□□□ -1.42
PEX28YHR150W ECM14P38836 430 aa6.19□□□□□ -1.42
PEX28YHR150W YHR173CP38864 112 aa6.19□□□□□ -1.42
PEX28YHR150W RPA43P46669 326 aa6.19□□□□□ -1.42
PEX28YHR150W YJL028WP47062 111 aa6.19□□□□□ -1.42
PEX28YHR150W CSI2Q08054 341 aa6.19□□□□□ -1.42
PEX28YHR150W RPS22BQ3E7Y3 130 aaKnown RBP6.19□□□□□ -1.42
PEX28YHR150W SEC4P07560 215 aaKnown RBP6.18□□□□□ -1.42
PEX28YHR150W PAU16P35994 123 aa6.18□□□□□ -1.42
PEX28YHR150W YGP1P38616 354 aaKnown RBP6.18□□□□□ -1.42
PEX28YHR150W CSM4Q08955 156 aa6.18□□□□□ -1.42
PEX28YHR150W TPT1Q12272 230 aaKnown RBP6.18□□□□□ -1.42
PEX28YHR150W HTB1P02293 131 aaKnown RBP6.17□□□□□ -1.42
PEX28YHR150W HMRA1P0CY11 126 aa6.17□□□□□ -1.42
PEX28YHR150W YKL187CP34231 750 aa6.17□□□□□ -1.42
PEX28YHR150W CTR2P38865 189 aa6.17□□□□□ -1.42
PEX28YHR150W UIP3P39547 235 aa6.17□□□□□ -1.42
PEX28YHR150W TDA4P47153 279 aa6.17□□□□□ -1.42
PEX28YHR150W TOM7P53507 60 aa6.17□□□□□ -1.42
PEX28YHR150W SSU72P53538 206 aaPredicted RBP6.17□□□□□ -1.42
PEX28YHR150W FIT2Q08906 153 aa6.17□□□□□ -1.42
PEX28YHR150W YMR105W-AQ8TGS8 64 aa6.17□□□□□ -1.42
PEX28YHR150W ATP10P18496 279 aa6.16□□□□□ -1.42
PEX28YHR150W DAL80P26343 269 aa6.16□□□□□ -1.42
PEX28YHR150W FPR2P32472 135 aa6.16□□□□□ -1.42
PEX28YHR150W YKL102CP34249 101 aa6.16□□□□□ -1.42
PEX28YHR150W DOG1P38774 246 aa6.16□□□□□ -1.42
PEX28YHR150W TEM1P38987 245 aa6.16□□□□□ -1.42
PEX28YHR150W PRE5P40302 234 aaKnown RBP6.16□□□□□ -1.42
PEX28YHR150W YJL118WP47022 219 aa6.16□□□□□ -1.42
PEX28YHR150W YER190C-BP0CX94 160 aa6.16□□□□□ -1.42
PEX28YHR150W YEL077W-AP0CX95 160 aa6.16□□□□□ -1.42
PEX28YHR150W YGR296C-BP0CX96 160 aa6.16□□□□□ -1.42
PEX28YHR150W YPL283W-BP0CX97 160 aa6.16□□□□□ -1.42
PEX28YHR150W YPR204C-AP0CX98 160 aa6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 80.7 ms