RNA–Protein interactions for RNA: YHR053C

CUP1-1, Transcript of Metallothionein, yeastyeast

Gene CUP1-1, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-1YHR053C YML079WQ03629 201 aa0.85□□□□□ -2.27
CUP1-1YHR053C GLR1P41921 483 aaKnown RBP0.84□□□□□ -2.27
CUP1-1YHR053C TMA23Q03525 211 aa0.84□□□□□ -2.27
CUP1-1YHR053C AVO2Q04749 426 aa0.84□□□□□ -2.27
CUP1-1YHR053C TRM3Q07527 1436 aa0.83□□□□□ -2.28
CUP1-1YHR053C YEL073CP39974 107 aa0.83□□□□□ -2.28
CUP1-1YHR053C XPT1P47165 209 aa0.83□□□□□ -2.28
CUP1-1YHR053C PAC10P48363 199 aa0.83□□□□□ -2.28
CUP1-1YHR053C FCY1Q12178 158 aa0.83□□□□□ -2.28
CUP1-1YHR053C ATP7P30902 174 aa0.82□□□□□ -2.28
CUP1-1YHR053C CLG1P35190 452 aa0.82□□□□□ -2.28
CUP1-1YHR053C YGR269WP40326 108 aa0.82□□□□□ -2.28
CUP1-1YHR053C POG1P40473 351 aa0.82□□□□□ -2.28
CUP1-1YHR053C PEX11Q12462 236 aa0.82□□□□□ -2.28
CUP1-1YHR053C NUF2P33895 451 aa0.81□□□□□ -2.28
CUP1-1YHR053C NQM1P53228 333 aaPredicted RBP0.81□□□□□ -2.28
CUP1-1YHR053C PRP8P33334 2413 aaKnown RBP0.81□□□□□ -2.28
CUP1-1YHR053C YCR001WP25347 104 aa0.8□□□□□ -2.28
CUP1-1YHR053C TRR1P29509 319 aaKnown RBP0.8□□□□□ -2.28
CUP1-1YHR053C SOL1P50278 321 aa0.8□□□□□ -2.28
CUP1-1YHR053C PLP1Q04004 230 aa0.8□□□□□ -2.28
CUP1-1YHR053C RPS25BP0C0T4 108 aaKnown RBP0.79□□□□□ -2.28
CUP1-1YHR053C RPS25AQ3E792 108 aaPredicted RBP0.79□□□□□ -2.28
CUP1-1YHR053C KIN28P06242 306 aa0.78□□□□□ -2.28
CUP1-1YHR053C CIN5P40917 295 aa0.78□□□□□ -2.28
CUP1-1YHR053C APS3P47064 194 aa0.78□□□□□ -2.28
CUP1-1YHR053C GEP7P53171 287 aa0.78□□□□□ -2.28
CUP1-1YHR053C GIM3P53900 129 aa0.78□□□□□ -2.28
CUP1-1YHR053C SYM1Q06563 197 aa0.78□□□□□ -2.28
CUP1-1YHR053C SPS2P08459 502 aa0.77□□□□□ -2.29
CUP1-1YHR053C YOL013W-AP0C272 63 aaPredicted RBP0.77□□□□□ -2.29
CUP1-1YHR053C SEC72P39742 193 aaKnown RBP0.77□□□□□ -2.29
CUP1-1YHR053C YEL028WP39989 153 aa0.77□□□□□ -2.29
CUP1-1YHR053C LIP1Q03579 150 aa0.77□□□□□ -2.29
CUP1-1YHR053C UIP4Q08926 304 aa0.77□□□□□ -2.29
CUP1-1YHR053C TAF2P23255 1407 aa0.76□□□□□ -2.29
CUP1-1YHR053C VAM10Q08474 114 aa0.76□□□□□ -2.29
CUP1-1YHR053C YHR213W-BQ8TGK1 99 aa0.75□□□□□ -2.29
CUP1-1YHR053C YLR050CQ12155 161 aaKnown RBP0.73□□□□□ -2.29
CUP1-1YHR053C UBC6P33296 250 aaPredicted RBP0.72□□□□□ -2.29
CUP1-1YHR053C PTC1P35182 281 aa0.72□□□□□ -2.29
CUP1-1YHR053C CSH1P38287 376 aa0.72□□□□□ -2.29
CUP1-1YHR053C GRX3Q03835 250 aa0.72□□□□□ -2.29
CUP1-1YHR053C GRE1Q08969 168 aa0.72□□□□□ -2.29
CUP1-1YHR053C SRP14P38985 146 aa0.71□□□□□ -2.3
CUP1-1YHR053C SED1Q01589 338 aa0.71□□□□□ -2.3
CUP1-1YHR053C THI74Q04083 370 aa0.71□□□□□ -2.3
CUP1-1YHR053C ATG10Q07879 167 aa0.71□□□□□ -2.3
CUP1-1YHR053C CMD1P06787 147 aaKnown RBP0.7□□□□□ -2.3
CUP1-1YHR053C INO4P13902 151 aa0.7□□□□□ -2.3
CUP1-1YHR053C RAD51P25454 400 aa0.7□□□□□ -2.3
CUP1-1YHR053C SPT14P32363 452 aa0.7□□□□□ -2.3
CUP1-1YHR053C SRP102P36057 244 aaPredicted RBP0.7□□□□□ -2.3
CUP1-1YHR053C YBR027CP38220 110 aa0.7□□□□□ -2.3
CUP1-1YHR053C HHY1P39982 102 aa0.7□□□□□ -2.3
CUP1-1YHR053C YIP3P53633 176 aa0.69□□□□□ -2.3
CUP1-1YHR053C YEL014CP39999 101 aa0.68□□□□□ -2.3
CUP1-1YHR053C YNL122CP53921 115 aaPredicted RBP0.68□□□□□ -2.3
CUP1-1YHR053C TMA20P89886 181 aaPredicted RBP0.68□□□□□ -2.3
CUP1-1YHR053C YDL241WQ07738 123 aa0.68□□□□□ -2.3
CUP1-1YHR053C YOR072WQ08486 104 aa0.68□□□□□ -2.3
CUP1-1YHR053C ECM31P38122 312 aa0.67□□□□□ -2.3
CUP1-1YHR053C YPT31P38555 223 aaKnown RBP0.67□□□□□ -2.3
CUP1-1YHR053C EGD2P38879 174 aaKnown RBP0.67□□□□□ -2.3
CUP1-1YHR053C GLC8P41818 229 aa0.67□□□□□ -2.3
CUP1-1YHR053C YNL140CP53910 189 aa0.67□□□□□ -2.3
CUP1-1YHR053C YPR114WQ06107 315 aa0.67□□□□□ -2.3
CUP1-1YHR053C PRM3Q08931 133 aa0.67□□□□□ -2.3
CUP1-1YHR053C YNR064CP53750 290 aa0.66□□□□□ -2.3
CUP1-1YHR053C ADE6P38972 1358 aaKnown RBP0.66□□□□□ -2.3
CUP1-1YHR053C CCC1P47818 322 aa0.65□□□□□ -2.31
CUP1-1YHR053C HSK3P69852 69 aa0.64□□□□□ -2.31
CUP1-1YHR053C MGR2Q02889 113 aa0.64□□□□□ -2.31
CUP1-1YHR053C CMC4Q3E7A9 73 aa0.64□□□□□ -2.31
CUP1-1YHR053C ROM2P51862 1356 aaKnown RBP0.64□□□□□ -2.31
CUP1-1YHR053C SPA2P23201 1466 aaKnown RBP0.63□□□□□ -2.31
CUP1-1YHR053C HAP2P06774 265 aa0.63□□□□□ -2.31
CUP1-1YHR053C RPS22AP0C0W1 130 aaKnown RBP0.63□□□□□ -2.31
CUP1-1YHR053C HYP2P23301 157 aaKnown RBP0.63□□□□□ -2.31
CUP1-1YHR053C HSP150P32478 413 aa0.63□□□□□ -2.31
CUP1-1YHR053C YLR046CQ12253 270 aa0.63□□□□□ -2.31
CUP1-1YHR053C RPS22BQ3E7Y3 130 aaKnown RBP0.63□□□□□ -2.31
CUP1-1YHR053C YDR102CQ03864 110 aa0.62□□□□□ -2.31
CUP1-1YHR053C ATP5P09457 212 aa0.61□□□□□ -2.31
CUP1-1YHR053C ATG38Q05789 226 aaKnown RBP0.61□□□□□ -2.31
CUP1-1YHR053C NMA1Q06178 401 aaKnown RBP0.61□□□□□ -2.31
CUP1-1YHR053C CDC39P25655 2108 aaKnown RBP0.61□□□□□ -2.31
CUP1-1YHR053C YGL041W-AP0C5N3 154 aa0.6□□□□□ -2.31
CUP1-1YHR053C HTD2P38790 280 aaKnown RBP0.6□□□□□ -2.31
CUP1-1YHR053C YGL101WP53144 215 aa0.6□□□□□ -2.31
CUP1-1YHR053C ATG8P38182 117 aaRIP-Chip data0.58□□□□□ -2.32not detected
CUP1-1YHR053C FMN1Q03778 218 aa0.58□□□□□ -2.32
CUP1-1YHR053C RPL35AP0CX84 120 aaKnown RBP0.57□□□□□ -2.32
CUP1-1YHR053C RPL35BP0CX85 120 aaKnown RBP0.57□□□□□ -2.32
CUP1-1YHR053C IPT1P38954 527 aa0.57□□□□□ -2.32
CUP1-1YHR053C YMR141CP40211 102 aa0.57□□□□□ -2.32
CUP1-1YHR053C RCF2P53721 224 aa0.56□□□□□ -2.32
CUP1-1YHR053C LSM3P57743 89 aaKnown RBP0.56□□□□□ -2.32
CUP1-1YHR053C YDR476CQ03362 224 aa0.56□□□□□ -2.32
CUP1-1YHR053C HSL1P34244 1518 aa0.55□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms