RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W PEX11Q12462 236 aa-0.27□□□□□ -2.45
CSE1YGL238W EFG1Q3E705 233 aaKnown RBP-0.27□□□□□ -2.45
CSE1YGL238W RPB7P34087 171 aa-0.28□□□□□ -2.45
CSE1YGL238W YKL070WP36087 169 aa-0.28□□□□□ -2.45
CSE1YGL238W YBR016WP38216 128 aa-0.28□□□□□ -2.45
CSE1YGL238W ALB1P47019 175 aaPredicted RBP-0.28□□□□□ -2.45
CSE1YGL238W YJL009WP47078 108 aa-0.28□□□□□ -2.45
CSE1YGL238W ABF2Q02486 183 aa-0.28□□□□□ -2.45
CSE1YGL238W RAV2Q03956 351 aa-0.28□□□□□ -2.45
CSE1YGL238W FUS2Q05670 677 aa-0.28□□□□□ -2.45
CSE1YGL238W ATG17Q06410 417 aa-0.28□□□□□ -2.45
CSE1YGL238W RRP40Q08285 240 aaKnown RBP-0.28□□□□□ -2.45
CSE1YGL238W RTC6O14464 93 aa-0.28□□□□□ -2.45
CSE1YGL238W MEP1P40260 492 aa-0.28□□□□□ -2.45
CSE1YGL238W GVP36P40531 326 aaKnown RBP-0.28□□□□□ -2.45
CSE1YGL238W ALG13P53178 202 aa-0.28□□□□□ -2.45
CSE1YGL238W FMP16Q12497 93 aa-0.28□□□□□ -2.45
CSE1YGL238W YPR010C-AA5Z2X5 72 aa-0.29□□□□□ -2.46
CSE1YGL238W YSF3P0C074 85 aaPredicted RBP-0.29□□□□□ -2.46
CSE1YGL238W YOL013W-AP0C272 63 aaPredicted RBP-0.29□□□□□ -2.46
CSE1YGL238W YLR156WP0CE96 114 aa-0.29□□□□□ -2.46
CSE1YGL238W YLR159WP0CE97 114 aa-0.29□□□□□ -2.46
CSE1YGL238W YLR161WP0CE98 114 aa-0.29□□□□□ -2.46
CSE1YGL238W MET16P18408 261 aaPredicted RBP-0.29□□□□□ -2.46
CSE1YGL238W ADE1P27616 306 aa-0.29□□□□□ -2.46
CSE1YGL238W HSP150P32478 413 aa-0.29□□□□□ -2.46
CSE1YGL238W YHL018WP38744 120 aaPredicted RBP-0.29□□□□□ -2.46
CSE1YGL238W APS3P47064 194 aa-0.29□□□□□ -2.46
CSE1YGL238W YJR128WP47162 119 aa-0.29□□□□□ -2.46
CSE1YGL238W XPT1P47165 209 aa-0.29□□□□□ -2.46
CSE1YGL238W THG1P53215 237 aaKnown RBP-0.29□□□□□ -2.46
CSE1YGL238W YPR174CQ06616 221 aaPredicted RBP-0.29□□□□□ -2.46
CSE1YGL238W CSM4Q08955 156 aa-0.29□□□□□ -2.46
CSE1YGL238W RAD28Q12021 506 aa-0.29□□□□□ -2.46
CSE1YGL238W GIS3Q12418 502 aa-0.29□□□□□ -2.46
CSE1YGL238W KSH1Q8TGJ3 72 aa-0.29□□□□□ -2.46
CSE1YGL238W YHR213WP0CI67 198 aa-0.29□□□□□ -2.46
CSE1YGL238W CSM1P25651 190 aa-0.29□□□□□ -2.46
CSE1YGL238W SUI1P32911 108 aaKnown RBP-0.29□□□□□ -2.46
CSE1YGL238W YAR068WP39564 161 aa-0.29□□□□□ -2.46
CSE1YGL238W GIM4P40005 111 aaKnown RBP-0.29□□□□□ -2.46
CSE1YGL238W OST6Q03723 332 aa-0.29□□□□□ -2.46
CSE1YGL238W YMR082CQ04276 118 aa-0.29□□□□□ -2.46
CSE1YGL238W LPP1Q04396 274 aa-0.29□□□□□ -2.46
CSE1YGL238W COA4Q05809 96 aa-0.29□□□□□ -2.46
CSE1YGL238W SDO1Q07953 250 aaKnown RBP-0.29□□□□□ -2.46
CSE1YGL238W ABP140Q08641 628 aaKnown RBP-0.29□□□□□ -2.46
CSE1YGL238W TAR1Q8TGM6 124 aa-0.29□□□□□ -2.46
CSE1YGL238W ODC2Q99297 307 aa-0.29□□□□□ -2.46
CSE1YGL238W SPS2P08459 502 aa-0.3□□□□□ -2.46
CSE1YGL238W RPL35AP0CX84 120 aaKnown RBP-0.3□□□□□ -2.46
CSE1YGL238W RPL35BP0CX85 120 aaKnown RBP-0.3□□□□□ -2.46
CSE1YGL238W PTM1P32857 523 aa-0.3□□□□□ -2.46
CSE1YGL238W UTP30P36144 274 aaKnown RBP-0.3□□□□□ -2.46
CSE1YGL238W MIC12P38341 106 aa-0.3□□□□□ -2.46
CSE1YGL238W RFC2P40348 353 aa-0.3□□□□□ -2.46
CSE1YGL238W NSA1P53136 463 aaPredicted RBP-0.3□□□□□ -2.46
CSE1YGL238W FYV6P53913 173 aa-0.3□□□□□ -2.46
CSE1YGL238W YLR194CQ05777 254 aa-0.3□□□□□ -2.46
CSE1YGL238W RPL27AP0C2H6 136 aaKnown RBP-0.3□□□□□ -2.46
CSE1YGL238W UBC4P15731 148 aa-0.3□□□□□ -2.46
CSE1YGL238W ATP15P21306 62 aa-0.3□□□□□ -2.46
CSE1YGL238W MRPS28P21771 286 aa-0.3□□□□□ -2.46
CSE1YGL238W MGM101P32787 269 aaKnown RBP-0.3□□□□□ -2.46
CSE1YGL238W SNC2P33328 115 aa-0.3□□□□□ -2.46
CSE1YGL238W YBR285WP38354 144 aa-0.3□□□□□ -2.46
CSE1YGL238W NSG1P38837 291 aa-0.3□□□□□ -2.46
CSE1YGL238W ERG28P40030 148 aa-0.3□□□□□ -2.46
CSE1YGL238W YIL102CP40488 101 aa-0.3□□□□□ -2.46
CSE1YGL238W YJR111CP47148 283 aaKnown RBP-0.3□□□□□ -2.46
CSE1YGL238W GPI17Q04080 534 aa-0.3□□□□□ -2.46
CSE1YGL238W YPR098CQ06089 161 aa-0.3□□□□□ -2.46
CSE1YGL238W RRP36Q12481 300 aaPredicted RBP-0.3□□□□□ -2.46
CSE1YGL238W CBT1P36038 271 aaPredicted RBP-0.31□□□□□ -2.46
CSE1YGL238W ETR1P38071 380 aa-0.31□□□□□ -2.46
CSE1YGL238W TDA4P47153 279 aa-0.31□□□□□ -2.46
CSE1YGL238W UBC12P52491 188 aa-0.31□□□□□ -2.46
CSE1YGL238W SNO1Q03144 224 aa-0.31□□□□□ -2.46
CSE1YGL238W CUE4Q04201 117 aaPredicted RBP-0.31□□□□□ -2.46
CSE1YGL238W CDC123Q05791 360 aa-0.31□□□□□ -2.46
CSE1YGL238W GMC2Q06201 188 aa-0.31□□□□□ -2.46
CSE1YGL238W TSC3Q3E790 80 aa-0.31□□□□□ -2.46
CSE1YGL238W PRP18P33411 251 aaPredicted RBP-0.31□□□□□ -2.46
CSE1YGL238W ECM4P36156 370 aa-0.31□□□□□ -2.46
CSE1YGL238W AIM4P38305 123 aaPredicted RBP-0.31□□□□□ -2.46
CSE1YGL238W YER134CP40081 178 aa-0.31□□□□□ -2.46
CSE1YGL238W YPL073CP40323 161 aa-0.31□□□□□ -2.46
CSE1YGL238W GET1P53192 235 aa-0.31□□□□□ -2.46
CSE1YGL238W UPS3Q04006 179 aa-0.31□□□□□ -2.46
CSE1YGL238W YHR007C-AQ07074 71 aa-0.31□□□□□ -2.46
CSE1YGL238W YDL241WQ07738 123 aa-0.31□□□□□ -2.46
CSE1YGL238W BTS1Q12051 335 aa-0.31□□□□□ -2.46
CSE1YGL238W YGR240C-AQ3E786 66 aa-0.31□□□□□ -2.46
CSE1YGL238W UBC5P15732 148 aa-0.31□□□□□ -2.46
CSE1YGL238W POP4P38336 279 aa-0.31□□□□□ -2.46
CSE1YGL238W MCM22P47167 239 aa-0.31□□□□□ -2.46
CSE1YGL238W LSM3P57743 89 aaKnown RBP-0.31□□□□□ -2.46
CSE1YGL238W YDC1Q02896 317 aa-0.31□□□□□ -2.46
CSE1YGL238W RRN5Q02983 363 aa-0.31□□□□□ -2.46
CSE1YGL238W MED4Q12343 284 aa-0.31□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 51.4 ms