RNA–Protein interactions for RNA: YGL212W

VAM7, Transcript of Vacuolar SNARE protein, yeast

Gene VAM7, Length 951 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM7	YGL212W	YNL320W	P42840	284 aa		4.63	□□□□□ -1.67
VAM7	YGL212W	SMM1	P53720	384 aa	Known RBP	4.63	□□□□□ -1.67
VAM7	YGL212W	ALG9	P53868	555 aa	Known RBP	4.63	□□□□□ -1.67
VAM7	YGL212W	YNL010W	P53981	241 aa	Known RBP	4.63	□□□□□ -1.67
VAM7	YGL212W	YML018C	Q03730	393 aa		4.63	□□□□□ -1.67
VAM7	YGL212W	SWC7	Q06707	132 aa		4.63	□□□□□ -1.67
VAM7	YGL212W	YOL160W	Q08321	113 aa		4.63	□□□□□ -1.67
VAM7	YGL212W	ATG15	P25641	520 aa		4.62	□□□□□ -1.67
VAM7	YGL212W	EMP24	P32803	203 aa	Known RBP	4.62	□□□□□ -1.67
VAM7	YGL212W	YET1	P35723	206 aa		4.62	□□□□□ -1.67
VAM7	YGL212W	GPX2	P38143	162 aa		4.62	□□□□□ -1.67
VAM7	YGL212W	YPT10	P38146	199 aa		4.62	□□□□□ -1.67
VAM7	YGL212W	LAG1	P38703	411 aa		4.62	□□□□□ -1.67
VAM7	YGL212W	YJL213W	P40896	331 aa		4.62	□□□□□ -1.67
VAM7	YGL212W	TES1	P41903	349 aa	Known RBP	4.62	□□□□□ -1.67
VAM7	YGL212W	PFS2	P42841	465 aa	Known RBP	4.62	□□□□□ -1.67
VAM7	YGL212W	YIP4	P53093	235 aa		4.62	□□□□□ -1.67
VAM7	YGL212W	SAY1	P53324	424 aa		4.62	□□□□□ -1.67
VAM7	YGL212W	YNL046W	P53956	172 aa		4.62	□□□□□ -1.67
VAM7	YGL212W	YPL062W	Q02781	134 aa		4.62	□□□□□ -1.67
VAM7	YGL212W	LOA1	Q06508	300 aa		4.62	□□□□□ -1.67
VAM7	YGL212W	PST1	Q12355	444 aa		4.62	□□□□□ -1.67
VAM7	YGL212W	IZH2	Q12442	317 aa		4.62	□□□□□ -1.67
VAM7	YGL212W	ATP5	P09457	212 aa		4.61	□□□□□ -1.67
VAM7	YGL212W	MRS3	P10566	314 aa		4.61	□□□□□ -1.67
VAM7	YGL212W	HAP3	P13434	144 aa		4.61	□□□□□ -1.67
VAM7	YGL212W	RPB3	P16370	318 aa	Known RBP	4.61	□□□□□ -1.67
VAM7	YGL212W	SDH4	P37298	181 aa		4.61	□□□□□ -1.67
VAM7	YGL212W	YBR063C	P38083	404 aa		4.61	□□□□□ -1.67
VAM7	YGL212W	MOH1	P38191	138 aa		4.61	□□□□□ -1.67
VAM7	YGL212W	PCL5	P38794	229 aa		4.61	□□□□□ -1.67
VAM7	YGL212W	TEM1	P38987	245 aa		4.61	□□□□□ -1.67
VAM7	YGL212W	YER181C	P40097	107 aa		4.61	□□□□□ -1.67
VAM7	YGL212W	PRM5	P40476	318 aa		4.61	□□□□□ -1.67
VAM7	YGL212W	FIP1	P45976	327 aa		4.61	□□□□□ -1.67
VAM7	YGL212W	BAT2	P47176	376 aa	Known RBP	4.61	□□□□□ -1.67
VAM7	YGL212W	DAN1	P47178	298 aa		4.61	□□□□□ -1.67
VAM7	YGL212W	MRH4	P53166	561 aa		4.61	□□□□□ -1.67
VAM7	YGL212W	BET5	Q03630	159 aa		4.61	□□□□□ -1.67
VAM7	YGL212W	KEI1	Q06346	221 aa		4.61	□□□□□ -1.67
VAM7	YGL212W	GPI11	Q06636	219 aa		4.61	□□□□□ -1.67
VAM7	YGL212W	YPL229W	Q99395	206 aa		4.61	□□□□□ -1.67
VAM7	YGL212W	BI2	P03873	423 aa		4.6	□□□□□ -1.67
VAM7	YGL212W	FUN14	P18411	198 aa		4.6	□□□□□ -1.67
VAM7	YGL212W	SSS1	P35179	80 aa		4.6	□□□□□ -1.67
VAM7	YGL212W	LSM2	P38203	95 aa	Known RBP	4.6	□□□□□ -1.67
VAM7	YGL212W	YBR013C	P38215	129 aa		4.6	□□□□□ -1.67
VAM7	YGL212W	YGL088W	P53151	121 aa		4.6	□□□□□ -1.67
VAM7	YGL212W	YGR151C	P53287	111 aa		4.6	□□□□□ -1.67
VAM7	YGL212W	YPL162C	Q12042	273 aa		4.6	□□□□□ -1.67
VAM7	YGL212W	Q0255	P03881	472 aa		4.59	□□□□□ -1.67
VAM7	YGL212W	SPS100	P13130	326 aa		4.59	□□□□□ -1.67
VAM7	YGL212W	COX10	P21592	462 aa		4.59	□□□□□ -1.67
VAM7	YGL212W	CSH1	P38287	376 aa		4.59	□□□□□ -1.67
VAM7	YGL212W	SNM1	P40993	198 aa		4.59	□□□□□ -1.67
VAM7	YGL212W	CIS3	P47001	227 aa		4.59	□□□□□ -1.67
VAM7	YGL212W	ARP3	P47117	449 aa	Known RBP	4.59	□□□□□ -1.67
VAM7	YGL212W	TDA4	P47153	279 aa		4.59	□□□□□ -1.67
VAM7	YGL212W	GEP7	P53171	287 aa		4.59	□□□□□ -1.67
VAM7	YGL212W	YGR050C	P53231	118 aa		4.59	□□□□□ -1.67
VAM7	YGL212W	FMP41	P53889	259 aa	Known RBP	4.59	□□□□□ -1.67
VAM7	YGL212W	BUD25	P85052	153 aa		4.59	□□□□□ -1.67
VAM7	YGL212W	NUP100	Q02629	959 aa		4.59	□□□□□ -1.67
VAM7	YGL212W	GAS3	Q03655	524 aa		4.59	□□□□□ -1.67
VAM7	YGL212W	FCF1	Q05498	189 aa	Predicted RBP	4.59	□□□□□ -1.67
VAM7	YGL212W	YOR186W	Q08560	144 aa		4.59	□□□□□ -1.67
VAM7	YGL212W	CLB6	P32943	380 aa		4.58	□□□□□ -1.68
VAM7	YGL212W	YCR041W	P37265	110 aa		4.58	□□□□□ -1.68
VAM7	YGL212W	YBL081W	P38180	368 aa	Known RBP	4.58	□□□□□ -1.68
VAM7	YGL212W	YAR029W	P39549	74 aa		4.58	□□□□□ -1.68
VAM7	YGL212W	PAM16	P42949	149 aa		4.58	□□□□□ -1.68
VAM7	YGL212W	YNL234W	P53857	426 aa		4.58	□□□□□ -1.68
VAM7	YGL212W	YDR415C	Q04033	374 aa	Predicted RBP	4.58	□□□□□ -1.68
VAM7	YGL212W	YMR103C	Q04436	120 aa		4.58	□□□□□ -1.68
VAM7	YGL212W	GAL83	Q04739	417 aa		4.58	□□□□□ -1.68
VAM7	YGL212W	YHR214C-E	Q8TGK0	99 aa		4.58	□□□□□ -1.68
VAM7	YGL212W	HTL1	Q9URQ5	78 aa		4.58	□□□□□ -1.68
VAM7	YGL212W	HMRA1	P0CY11	126 aa		4.57	□□□□□ -1.68
VAM7	YGL212W	CKS1	P20486	150 aa	Known RBP	4.57	□□□□□ -1.68
VAM7	YGL212W	AIM26	P32858	118 aa		4.57	□□□□□ -1.68
VAM7	YGL212W	AVT2	P39981	480 aa		4.57	□□□□□ -1.68
VAM7	YGL212W	YGR018C	P53211	109 aa		4.57	□□□□□ -1.68
VAM7	YGL212W	UPS3	Q04006	179 aa		4.57	□□□□□ -1.68
VAM7	YGL212W	SCW10	Q04951	389 aa		4.57	□□□□□ -1.68
VAM7	YGL212W	TOM40	P23644	387 aa	Known RBP	4.56	□□□□□ -1.68
VAM7	YGL212W	AHT1	P29589	182 aa		4.56	□□□□□ -1.68
VAM7	YGL212W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
VAM7	YGL212W	CAT5	P41735	233 aa		4.56	□□□□□ -1.68
VAM7	YGL212W	PRY1	P47032	299 aa		4.56	□□□□□ -1.68
VAM7	YGL212W	SNN1	P48232	102 aa		4.56	□□□□□ -1.68
VAM7	YGL212W	YGR164W	P53291	111 aa		4.56	□□□□□ -1.68
VAM7	YGL212W	ERV29	P53337	310 aa		4.56	□□□□□ -1.68
VAM7	YGL212W	AAH1	P53909	347 aa		4.56	□□□□□ -1.68
VAM7	YGL212W	YPL039W	Q03080	316 aa		4.56	□□□□□ -1.68
VAM7	YGL212W	FIT1	Q04433	528 aa		4.56	□□□□□ -1.68
VAM7	YGL212W	YMR316C-A	I2HB70	103 aa		4.55	□□□□□ -1.68
VAM7	YGL212W	LDB16	P25587	256 aa		4.55	□□□□□ -1.68
VAM7	YGL212W	HIS7	P33734	552 aa	Known RBP	4.55	□□□□□ -1.68
VAM7	YGL212W	TMA19	P35691	167 aa	Known RBP	4.55	□□□□□ -1.68
VAM7	YGL212W	GGC1	P38988	300 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 114.6 ms