RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W RNH203Q12338 110 aa4.5□□□□□ -1.69
CDC43YGL155W ERG27Q12452 347 aaKnown RBP4.5□□□□□ -1.69
CDC43YGL155W RPL21BQ12672 160 aaKnown RBP4.5□□□□□ -1.69
CDC43YGL155W RPS22BQ3E7Y3 130 aaKnown RBP4.5□□□□□ -1.69
CDC43YGL155W POR1P04840 283 aaKnown RBP4.49□□□□□ -1.69
CDC43YGL155W HMRA1P0CY11 126 aa4.49□□□□□ -1.69
CDC43YGL155W RAD23P32628 398 aaKnown RBP4.49□□□□□ -1.69
CDC43YGL155W ICS2P38284 255 aa4.49□□□□□ -1.69
CDC43YGL155W YAR068WP39564 161 aa4.49□□□□□ -1.69
CDC43YGL155W PIN2Q12057 282 aa4.49□□□□□ -1.69
CDC43YGL155W SEC16P48415 2195 aaKnown RBP4.48□□□□□ -1.69
CDC43YGL155W DFR1P07807 211 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
CDC43YGL155W RPS23AP0CX29 145 aaKnown RBP4.48□□□□□ -1.69
CDC43YGL155W RPS23BP0CX30 145 aa4.48□□□□□ -1.69
CDC43YGL155W MRS3P10566 314 aa4.48□□□□□ -1.69
CDC43YGL155W ATP10P18496 279 aa4.48□□□□□ -1.69
CDC43YGL155W RPS2P25443 254 aaKnown RBP4.48□□□□□ -1.69
CDC43YGL155W SOR1P35497 357 aaKnown RBP4.48□□□□□ -1.69
CDC43YGL155W YHR173CP38864 112 aa4.48□□□□□ -1.69
CDC43YGL155W GLC8P41818 229 aa4.48□□□□□ -1.69
CDC43YGL155W DSK2P48510 373 aa4.48□□□□□ -1.69
CDC43YGL155W YNR064CP53750 290 aa4.48□□□□□ -1.69
CDC43YGL155W ARR2Q06597 130 aa4.48□□□□□ -1.69
CDC43YGL155W POS5Q06892 414 aa4.48□□□□□ -1.69
CDC43YGL155W SOR2Q07786 357 aa4.48□□□□□ -1.69
CDC43YGL155W GEP5Q12393 293 aa4.48□□□□□ -1.69
CDC43YGL155W ACC1Q00955 2233 aaKnown RBP4.48□□□□□ -1.69
CDC43YGL155W PIS1P06197 220 aaKnown RBP4.47□□□□□ -1.69
CDC43YGL155W NOP1P15646 327 aaKnown RBP4.47□□□□□ -1.69
CDC43YGL155W QRI5P32344 111 aa4.47□□□□□ -1.69
CDC43YGL155W PMU1P36069 295 aa4.47□□□□□ -1.69
CDC43YGL155W YKL069WP36088 180 aa4.47□□□□□ -1.69
CDC43YGL155W PHD1P36093 366 aa4.47□□□□□ -1.69
CDC43YGL155W MOH1P38191 138 aa4.47□□□□□ -1.69
CDC43YGL155W GAT2P40209 560 aa4.47□□□□□ -1.69
CDC43YGL155W YJL118WP47022 219 aa4.47□□□□□ -1.69
CDC43YGL155W CPD1P53314 239 aa4.47□□□□□ -1.69
CDC43YGL155W ATP19P81451 68 aa4.47□□□□□ -1.69
CDC43YGL155W TMA10Q06177 86 aa4.47□□□□□ -1.69
CDC43YGL155W CNL1Q06333 122 aa4.47□□□□□ -1.69
CDC43YGL155W MHR1Q06630 226 aa4.47□□□□□ -1.69
CDC43YGL155W YOL024WQ08172 172 aa4.47□□□□□ -1.69
CDC43YGL155W FOL3Q12676 427 aaPredicted RBP4.47□□□□□ -1.69
CDC43YGL155W YMR316C-AI2HB70 103 aa4.46□□□□□ -1.7
CDC43YGL155W SOD1P00445 154 aaKnown RBP4.46□□□□□ -1.7
CDC43YGL155W YKL187CP34231 750 aa4.46□□□□□ -1.7
CDC43YGL155W YKL102CP34249 101 aa4.46□□□□□ -1.7
CDC43YGL155W MIX23P38162 196 aa4.46□□□□□ -1.7
CDC43YGL155W YBL071CP38185 102 aa4.46□□□□□ -1.7
CDC43YGL155W SRP14P38985 146 aa4.46□□□□□ -1.7
CDC43YGL155W YIL163CP40448 117 aa4.46□□□□□ -1.7
CDC43YGL155W RPA43P46669 326 aa4.46□□□□□ -1.7
CDC43YGL155W YNR071CP53757 342 aa4.46□□□□□ -1.7
CDC43YGL155W CRZ1P53968 678 aa4.46□□□□□ -1.7
CDC43YGL155W SDH7Q04401 133 aa4.46□□□□□ -1.7
CDC43YGL155W YDR114CQ04597 100 aa4.46□□□□□ -1.7
CDC43YGL155W TRI1Q05024 226 aa4.46□□□□□ -1.7
CDC43YGL155W YCL001W-BQ96VH2 84 aa4.46□□□□□ -1.7
CDC43YGL155W COX2P00410 251 aa4.45□□□□□ -1.7
CDC43YGL155W HTB1P02293 131 aaKnown RBP4.45□□□□□ -1.7
CDC43YGL155W YER190C-BP0CX94 160 aa4.45□□□□□ -1.7
CDC43YGL155W YEL077W-AP0CX95 160 aa4.45□□□□□ -1.7
CDC43YGL155W YGR296C-BP0CX96 160 aa4.45□□□□□ -1.7
CDC43YGL155W YPL283W-BP0CX97 160 aa4.45□□□□□ -1.7
CDC43YGL155W YPR204C-AP0CX98 160 aa4.45□□□□□ -1.7
CDC43YGL155W TIR1P10863 254 aa4.45□□□□□ -1.7
CDC43YGL155W PAU16P35994 123 aa4.45□□□□□ -1.7
CDC43YGL155W CSH1P38287 376 aa4.45□□□□□ -1.7
CDC43YGL155W AME1P38313 324 aa4.45□□□□□ -1.7
CDC43YGL155W DOG1P38774 246 aa4.45□□□□□ -1.7
CDC43YGL155W PIR5P46999 287 aa4.45□□□□□ -1.7
CDC43YGL155W DUG3P53871 357 aa4.45□□□□□ -1.7
CDC43YGL155W MRX11Q03079 207 aa4.45□□□□□ -1.7
CDC43YGL155W YHP1Q04116 353 aa4.45□□□□□ -1.7
CDC43YGL155W GIM5Q04493 163 aa4.45□□□□□ -1.7
CDC43YGL155W RPL31AP0C2H8 113 aaKnown RBP4.44□□□□□ -1.7
CDC43YGL155W RPL31BP0C2H9 113 aaKnown RBP4.44□□□□□ -1.7
CDC43YGL155W HAP3P13434 144 aa4.44□□□□□ -1.7
CDC43YGL155W CUP2P15315 225 aa4.44□□□□□ -1.7
CDC43YGL155W YCR007CP25354 239 aa4.44□□□□□ -1.7
CDC43YGL155W YBR220CP38318 560 aa4.44□□□□□ -1.7
CDC43YGL155W UIP3P39547 235 aa4.44□□□□□ -1.7
CDC43YGL155W BDH1P39714 382 aa4.44□□□□□ -1.7
CDC43YGL155W CDC40P40968 455 aaPredicted RBP4.44□□□□□ -1.7
CDC43YGL155W YDL183CP48569 320 aa4.44□□□□□ -1.7
CDC43YGL155W YGL118CP53132 145 aa4.44□□□□□ -1.7
CDC43YGL155W COX18P53239 316 aa4.44□□□□□ -1.7
CDC43YGL155W IZH1Q03419 316 aa4.44□□□□□ -1.7
CDC43YGL155W YLR302CO13544 120 aa4.43□□□□□ -1.7
CDC43YGL155W RPL39P04650 51 aa4.43□□□□□ -1.7
CDC43YGL155W PAM17P36147 197 aa4.43□□□□□ -1.7
CDC43YGL155W YPT10P38146 199 aa4.43□□□□□ -1.7
CDC43YGL155W SFT2P38166 215 aa4.43□□□□□ -1.7
CDC43YGL155W PRE5P40302 234 aaKnown RBP4.43□□□□□ -1.7
CDC43YGL155W BNA2P47125 453 aa4.43□□□□□ -1.7
CDC43YGL155W YNL046WP53956 172 aa4.43□□□□□ -1.7
CDC43YGL155W CWC27Q02770 301 aa4.43□□□□□ -1.7
CDC43YGL155W YMR166CQ03829 368 aa4.43□□□□□ -1.7
CDC43YGL155W FIT2Q08906 153 aa4.43□□□□□ -1.7
CDC43YGL155W COX17Q12287 69 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 101.1 ms