RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C RTR2Q12378 196 aa2.09□□□□□ -2.07
SCL1YGL011C YNL146C-AQ3E7Z1 64 aa2.09□□□□□ -2.07
SCL1YGL011C ADE6P38972 1358 aaKnown RBP2.09□□□□□ -2.08
SCL1YGL011C FAS2P19097 1887 aaKnown RBP2.08□□□□□ -2.08
SCL1YGL011C TIR1P10863 254 aa2.08□□□□□ -2.08
SCL1YGL011C GCY1P14065 312 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
SCL1YGL011C ATP7P30902 174 aa2.08□□□□□ -2.08
SCL1YGL011C YHL018WP38744 120 aaPredicted RBP2.08□□□□□ -2.08
SCL1YGL011C RGI1P40043 161 aaPredicted RBP2.08□□□□□ -2.08
SCL1YGL011C HPM1P40481 377 aa2.08□□□□□ -2.08
SCL1YGL011C LSM8P47093 109 aaKnown RBP2.08□□□□□ -2.08
SCL1YGL011C RCF2P53721 224 aa2.08□□□□□ -2.08
SCL1YGL011C TMA20P89886 181 aaPredicted RBP2.08□□□□□ -2.08
SCL1YGL011C UBC7Q02159 165 aa2.08□□□□□ -2.08
SCL1YGL011C AIM34Q03673 198 aa2.08□□□□□ -2.08
SCL1YGL011C YHR007C-AQ07074 71 aa2.08□□□□□ -2.08
SCL1YGL011C FYV7Q12247 151 aa2.08□□□□□ -2.08
SCL1YGL011C YDL085C-AQ3E7B7 68 aaKnown RBP2.08□□□□□ -2.08
SCL1YGL011C CHC1P22137 1653 aaKnown RBP2.08□□□□□ -2.08
SCL1YGL011C UTP10P42945 1769 aaKnown RBP2.08□□□□□ -2.08
SCL1YGL011C ACC1Q00955 2233 aaKnown RBP2.07□□□□□ -2.08
SCL1YGL011C DNF2Q12675 1612 aa2.07□□□□□ -2.08
SCL1YGL011C NTE1Q04958 1679 aa2.07□□□□□ -2.08
SCL1YGL011C MDM35O60200 86 aa2.07□□□□□ -2.08
SCL1YGL011C YKR041WP36134 250 aa2.07□□□□□ -2.08
SCL1YGL011C GIM4P40005 111 aaKnown RBP2.07□□□□□ -2.08
SCL1YGL011C YFH7P43591 353 aa2.07□□□□□ -2.08
SCL1YGL011C PGA1P53896 198 aa2.07□□□□□ -2.08
SCL1YGL011C CSN9Q03981 162 aa2.07□□□□□ -2.08
SCL1YGL011C SHH3Q04487 196 aa2.07□□□□□ -2.08
SCL1YGL011C GIM5Q04493 163 aa2.07□□□□□ -2.08
SCL1YGL011C ZEO1Q08245 113 aa2.07□□□□□ -2.08
SCL1YGL011C KRE5P22023 1365 aa2.07□□□□□ -2.08
SCL1YGL011C MLP1Q02455 1875 aaKnown RBP2.06□□□□□ -2.08
SCL1YGL011C NSP1P14907 823 aaKnown RBP2.06□□□□□ -2.08
SCL1YGL011C LHP1P33399 275 aaKnown RBP2.06□□□□□ -2.08
SCL1YGL011C CUP9P41817 306 aa2.06□□□□□ -2.08
SCL1YGL011C FMP32P43557 207 aa2.06□□□□□ -2.08
SCL1YGL011C YNL033WP53964 284 aa2.06□□□□□ -2.08
SCL1YGL011C VPS71Q03433 280 aa2.06□□□□□ -2.08
SCL1YGL011C NHP10Q03435 203 aa2.06□□□□□ -2.08
SCL1YGL011C YMR253CQ04835 414 aa2.06□□□□□ -2.08
SCL1YGL011C PRP11Q07350 266 aaPredicted RBP2.06□□□□□ -2.08
SCL1YGL011C WIP1Q2V2P8 89 aa2.06□□□□□ -2.08
SCL1YGL011C KOG1P38873 1557 aa2.06□□□□□ -2.08
SCL1YGL011C RRP5Q05022 1729 aaKnown RBP2.05□□□□□ -2.08
SCL1YGL011C KIN28P06242 306 aa2.05□□□□□ -2.08
SCL1YGL011C HYR1P40581 163 aaKnown RBP2.05□□□□□ -2.08
SCL1YGL011C YAE1P47118 141 aaPredicted RBP2.05□□□□□ -2.08
SCL1YGL011C RPS12P48589 143 aaKnown RBP2.05□□□□□ -2.08
SCL1YGL011C DIE2P50076 525 aa2.05□□□□□ -2.08
SCL1YGL011C YGR042WP53227 271 aa2.05□□□□□ -2.08
SCL1YGL011C CWC27Q02770 301 aa2.05□□□□□ -2.08
SCL1YGL011C ARL3Q02804 198 aa2.05□□□□□ -2.08
SCL1YGL011C YDC1Q02896 317 aa2.05□□□□□ -2.08
SCL1YGL011C DIG2Q03373 323 aaKnown RBP2.05□□□□□ -2.08
SCL1YGL011C NKP2Q06162 153 aa2.05□□□□□ -2.08
SCL1YGL011C YET3Q07451 203 aa2.05□□□□□ -2.08
SCL1YGL011C FIT2Q08906 153 aa2.05□□□□□ -2.08
SCL1YGL011C YOR342CQ12182 319 aa2.05□□□□□ -2.08
SCL1YGL011C YPR014CQ6B0W2 109 aa2.05□□□□□ -2.08
SCL1YGL011C LYS2P07702 1392 aa2.05□□□□□ -2.08
SCL1YGL011C SNT2P53127 1403 aa2.05□□□□□ -2.08
SCL1YGL011C VPS15P22219 1454 aa2.05□□□□□ -2.08
SCL1YGL011C STU1P38198 1513 aa2.05□□□□□ -2.08
SCL1YGL011C RKR1Q04781 1562 aa2.05□□□□□ -2.08
SCL1YGL011C COX8P04039 78 aa2.04□□□□□ -2.08
SCL1YGL011C RPL35AP0CX84 120 aaKnown RBP2.04□□□□□ -2.08
SCL1YGL011C RPL35BP0CX85 120 aaKnown RBP2.04□□□□□ -2.08
SCL1YGL011C BPT1P14772 1559 aa2.04□□□□□ -2.08
SCL1YGL011C PHO13P19881 312 aa2.04□□□□□ -2.08
SCL1YGL011C AHC2P25649 128 aa2.04□□□□□ -2.08
SCL1YGL011C SRP102P36057 244 aaPredicted RBP2.04□□□□□ -2.08
SCL1YGL011C ECM31P38122 312 aa2.04□□□□□ -2.08
SCL1YGL011C YCF1P39109 1515 aaKnown RBP2.04□□□□□ -2.08
SCL1YGL011C GEA2P39993 1459 aaKnown RBP2.04□□□□□ -2.08
SCL1YGL011C SPC25P40014 221 aa2.04□□□□□ -2.08
SCL1YGL011C FLX1P40464 311 aa2.04□□□□□ -2.08
SCL1YGL011C GPI14P47088 403 aaKnown RBP2.04□□□□□ -2.08
SCL1YGL011C ATG2P53855 1592 aa2.04□□□□□ -2.08
SCL1YGL011C DAD4P69851 72 aa2.04□□□□□ -2.08
SCL1YGL011C PDR12Q02785 1511 aa2.04□□□□□ -2.08
SCL1YGL011C GPI17Q04080 534 aa2.04□□□□□ -2.08
SCL1YGL011C ULS1Q08562 1619 aa2.04□□□□□ -2.08
SCL1YGL011C YPR013CQ12145 317 aa2.04□□□□□ -2.08
SCL1YGL011C YOR214CQ12282 236 aa2.04□□□□□ -2.08
SCL1YGL011C ARO1P08566 1588 aaKnown RBP2.03□□□□□ -2.08
SCL1YGL011C GDB1Q06625 1536 aa2.03□□□□□ -2.08
SCL1YGL011C YSP2Q06681 1438 aa2.03□□□□□ -2.08
SCL1YGL011C NSG1P38837 291 aa2.03□□□□□ -2.08
SCL1YGL011C NVJ1P38881 321 aa2.03□□□□□ -2.08
SCL1YGL011C SEC72P39742 193 aaKnown RBP2.03□□□□□ -2.08
SCL1YGL011C POG1P40473 351 aa2.03□□□□□ -2.08
SCL1YGL011C RCE1Q03530 315 aa2.03□□□□□ -2.08
SCL1YGL011C SHH4Q06236 168 aa2.03□□□□□ -2.08
SCL1YGL011C FYV12Q08559 129 aa2.03□□□□□ -2.08
SCL1YGL011C YLR422WQ06409 1932 aa2.03□□□□□ -2.08
SCL1YGL011C DUR1,2P32528 1835 aaKnown RBP2.03□□□□□ -2.09
SCL1YGL011C DNF1P32660 1571 aa2.02□□□□□ -2.09
SCL1YGL011C PDR15Q04182 1529 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms