RNA–Protein interactions for RNA: YGL008C

PMA1, Transcript of Plasma membrane P2-type H+-ATPase, yeast

Gene PMA1, Length 2,757 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMA1	YGL008C	TTI2	P47168	421 aa		4.25	□□□□□ -1.73
PMA1	YGL008C	DOC1	P53068	250 aa		4.25	□□□□□ -1.73
PMA1	YGL008C	PCL9	Q12477	304 aa		4.25	□□□□□ -1.73
PMA1	YGL008C	YPR145C-A	Q2V2P0	78 aa		4.25	□□□□□ -1.73
PMA1	YGL008C	YFR032C-B	Q8TGU2	87 aa		4.25	□□□□□ -1.73
PMA1	YGL008C	TAD3	Q9URQ3	322 aa		4.25	□□□□□ -1.73
PMA1	YGL008C	RPB3	P16370	318 aa	Known RBP	4.25	□□□□□ -1.73
PMA1	YGL008C	SFC1	P33303	322 aa		4.25	□□□□□ -1.73
PMA1	YGL008C	RPL14A	P36105	138 aa	Known RBP	4.25	□□□□□ -1.73
PMA1	YGL008C	RPL14B	P38754	138 aa	Known RBP	4.25	□□□□□ -1.73
PMA1	YGL008C	EDC2	P40023	145 aa	Predicted RBP	4.25	□□□□□ -1.73
PMA1	YGL008C	DLS1	P40366	167 aa		4.25	□□□□□ -1.73
PMA1	YGL008C	YGR017W	P53210	297 aa		4.25	□□□□□ -1.73
PMA1	YGL008C	GRH1	Q04410	372 aa	Known RBP	4.25	□□□□□ -1.73
PMA1	YGL008C	ATG39	Q06159	398 aa		4.25	□□□□□ -1.73
PMA1	YGL008C	RAD28	Q12021	506 aa		4.25	□□□□□ -1.73
PMA1	YGL008C	VMA9	Q3E7B6	73 aa		4.25	□□□□□ -1.73
PMA1	YGL008C	YER039C-A	P0CD97	72 aa		4.25	□□□□□ -1.73
PMA1	YGL008C	EMP24	P32803	203 aa	Known RBP	4.25	□□□□□ -1.73
PMA1	YGL008C	PTH1	P38876	190 aa	Known RBP	4.25	□□□□□ -1.73
PMA1	YGL008C	SFT1	P43682	97 aa		4.25	□□□□□ -1.73
PMA1	YGL008C	BNS1	P50084	137 aa		4.25	□□□□□ -1.73
PMA1	YGL008C	PIR3	Q03180	325 aa		4.25	□□□□□ -1.73
PMA1	YGL008C	VAR1	P02381	398 aa		4.24	□□□□□ -1.73
PMA1	YGL008C	PHO85	P17157	305 aa		4.24	□□□□□ -1.73
PMA1	YGL008C	SSS1	P35179	80 aa		4.24	□□□□□ -1.73
PMA1	YGL008C	SKI6	P46948	246 aa	Predicted RBP	4.24	□□□□□ -1.73
PMA1	YGL008C	OST2	P46964	130 aa		4.24	□□□□□ -1.73
PMA1	YGL008C	YGL088W	P53151	121 aa		4.24	□□□□□ -1.73
PMA1	YGL008C	YLR042C	Q07990	161 aa		4.24	□□□□□ -1.73
PMA1	YGL008C	YLR422W	Q06409	1932 aa		4.24	□□□□□ -1.73
PMA1	YGL008C	MRPL39	P36533	70 aa		4.24	□□□□□ -1.73
PMA1	YGL008C	ATG8	P38182	117 aa	RIP-Chip data	4.24	□□□□□ -1.73	not detected
PMA1	YGL008C	RSM27	P53305	110 aa		4.24	□□□□□ -1.73
PMA1	YGL008C	IGO1	P53897	168 aa		4.24	□□□□□ -1.73
PMA1	YGL008C	BUD25	P85052	153 aa		4.24	□□□□□ -1.73
PMA1	YGL008C	RNH202	Q05635	350 aa		4.24	□□□□□ -1.73
PMA1	YGL008C	ANT1	Q06497	328 aa		4.24	□□□□□ -1.73
PMA1	YGL008C	YPS3	Q12303	508 aa		4.24	□□□□□ -1.73
PMA1	YGL008C	TIM22	Q12328	207 aa		4.24	□□□□□ -1.73
PMA1	YGL008C	GEP5	Q12393	293 aa		4.24	□□□□□ -1.73
PMA1	YGL008C	RPL25	P04456	142 aa	Known RBP	4.23	□□□□□ -1.73
PMA1	YGL008C	PBI2	P0CT04	75 aa	Known RBP	4.23	□□□□□ -1.73
PMA1	YGL008C	PAU24	P38155	120 aa		4.23	□□□□□ -1.73
PMA1	YGL008C	YJR085C	P47131	105 aa	Known RBP	4.23	□□□□□ -1.73
PMA1	YGL008C	ELP6	Q04868	273 aa		4.23	□□□□□ -1.73
PMA1	YGL008C	SPC3	Q12133	184 aa		4.23	□□□□□ -1.73
PMA1	YGL008C	YLR118C	Q12354	227 aa		4.23	□□□□□ -1.73
PMA1	YGL008C	MRP17	P28778	131 aa		4.23	□□□□□ -1.73
PMA1	YGL008C	SCM4	P32564	187 aa		4.23	□□□□□ -1.73
PMA1	YGL008C	TIM17	P39515	158 aa		4.23	□□□□□ -1.73
PMA1	YGL008C	FMP49	A0A023PZB3	126 aa		4.22	□□□□□ -1.73
PMA1	YGL008C	PIS1	P06197	220 aa	Known RBP	4.22	□□□□□ -1.73
PMA1	YGL008C	CHS7	P38843	316 aa		4.22	□□□□□ -1.73
PMA1	YGL008C	GGC1	P38988	300 aa		4.22	□□□□□ -1.73
PMA1	YGL008C	GCV3	P39726	170 aa	Predicted RBP	4.22	□□□□□ -1.73
PMA1	YGL008C	MED6	P38782	295 aa		4.22	□□□□□ -1.73
PMA1	YGL008C	COX14	P39103	70 aa		4.22	□□□□□ -1.73
PMA1	YGL008C	VMA21	P41806	77 aa		4.22	□□□□□ -1.73
PMA1	YGL008C	SAY1	P53324	424 aa		4.22	□□□□□ -1.73
PMA1	YGL008C	RPS8A	P0CX39	200 aa	Known RBP	4.21	□□□□□ -1.73
PMA1	YGL008C	RPS8B	P0CX40	200 aa	Known RBP	4.21	□□□□□ -1.73
PMA1	YGL008C	SNC2	P33328	115 aa		4.21	□□□□□ -1.73
PMA1	YGL008C	PRY2	P36110	329 aa		4.21	□□□□□ -1.73
PMA1	YGL008C	YJL213W	P40896	331 aa		4.21	□□□□□ -1.73
PMA1	YGL008C	KEI1	Q06346	221 aa		4.21	□□□□□ -1.73
PMA1	YGL008C	RRT7	Q07829	113 aa		4.21	□□□□□ -1.73
PMA1	YGL008C	TSC3	Q3E790	80 aa		4.21	□□□□□ -1.73
PMA1	YGL008C	STT4	P37297	1900 aa		4.21	□□□□□ -1.74
PMA1	YGL008C	RPL42A	P0CX27	106 aa	Known RBP	4.21	□□□□□ -1.74
PMA1	YGL008C	RPL42B	P0CX28	106 aa	Known RBP	4.21	□□□□□ -1.74
PMA1	YGL008C	YBR013C	P38215	129 aa		4.21	□□□□□ -1.74
PMA1	YGL008C	YHR140W	P38842	239 aa		4.21	□□□□□ -1.74
PMA1	YGL008C	YIL024C	P40543	189 aa		4.21	□□□□□ -1.74
PMA1	YGL008C	MDM34	P53083	459 aa		4.21	□□□□□ -1.74
PMA1	YGL008C	YDR366C	P87287	132 aa		4.21	□□□□□ -1.74
PMA1	YGL008C	YPR014C	Q6B0W2	109 aa		4.21	□□□□□ -1.74
PMA1	YGL008C	SMP1	P38128	452 aa		4.2	□□□□□ -1.74
PMA1	YGL008C	YER181C	P40097	107 aa		4.2	□□□□□ -1.74
PMA1	YGL008C	EMC4	P53073	190 aa		4.2	□□□□□ -1.74
PMA1	YGL008C	YCL001W-A	P87012	153 aa		4.2	□□□□□ -1.74
PMA1	YGL008C	NIP7	Q08962	181 aa	Known RBP	4.2	□□□□□ -1.74
PMA1	YGL008C	NAT3	Q06504	195 aa		4.2	□□□□□ -1.74
PMA1	YGL008C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	RIP-Chip
PMA1	YGL008C	SHB17	P36136	271 aa	Known RBP	4.19	□□□□□ -1.74
PMA1	YGL008C	MOB1	P40484	314 aa		4.19	□□□□□ -1.74
PMA1	YGL008C	DAN1	P47178	298 aa		4.19	□□□□□ -1.74
PMA1	YGL008C	YGR039W	P53225	103 aa		4.19	□□□□□ -1.74
PMA1	YGL008C	YLR179C	Q06252	201 aa	Known RBP	4.19	□□□□□ -1.74
PMA1	YGL008C	YPL278C	Q08990	100 aa		4.19	□□□□□ -1.74
PMA1	YGL008C	HAP2	P06774	265 aa		4.19	□□□□□ -1.74
PMA1	YGL008C	YER190C-B	P0CX94	160 aa		4.19	□□□□□ -1.74
PMA1	YGL008C	YEL077W-A	P0CX95	160 aa		4.19	□□□□□ -1.74
PMA1	YGL008C	YGR296C-B	P0CX96	160 aa		4.19	□□□□□ -1.74
PMA1	YGL008C	YPL283W-B	P0CX97	160 aa		4.19	□□□□□ -1.74
PMA1	YGL008C	YPR204C-A	P0CX98	160 aa		4.19	□□□□□ -1.74
PMA1	YGL008C	FYV4	P38783	130 aa	Predicted RBP	4.19	□□□□□ -1.74
PMA1	YGL008C	RPF1	P38805	295 aa	Known RBP	4.19	□□□□□ -1.74
PMA1	YGL008C	YGR015C	P53208	328 aa		4.19	□□□□□ -1.74
PMA1	YGL008C	LPP1	Q04396	274 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 56.9 ms