RNA–Protein interactions for RNA: YFL049W

SWP82, Transcript of Member of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWP82, Length 1,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWP82YFL049W YER039C-AP0CD97 72 aa3.24□□□□□ -1.89
SWP82YFL049W TIR1P10863 254 aa3.24□□□□□ -1.89
SWP82YFL049W FPR1P20081 114 aaKnown RBP3.24□□□□□ -1.89
SWP82YFL049W RPB5P20434 215 aa3.24□□□□□ -1.89
SWP82YFL049W RPF1P38805 295 aaKnown RBP3.24□□□□□ -1.89
SWP82YFL049W SKI6P46948 246 aaPredicted RBP3.24□□□□□ -1.89
SWP82YFL049W PAC10P48363 199 aa3.24□□□□□ -1.89
SWP82YFL049W TIM13P53299 105 aa3.24□□□□□ -1.89
SWP82YFL049W DML1Q03652 475 aa3.24□□□□□ -1.89
SWP82YFL049W YTH1Q06102 208 aaPredicted RBP3.24□□□□□ -1.89
SWP82YFL049W SWC7Q06707 132 aa3.24□□□□□ -1.89
SWP82YFL049W YOL014WQ08110 124 aa3.24□□□□□ -1.89
SWP82YFL049W NDD1Q08887 554 aa3.24□□□□□ -1.89
SWP82YFL049W YDL211CQ12121 372 aa3.24□□□□□ -1.89
SWP82YFL049W SPC3Q12133 184 aa3.24□□□□□ -1.89
SWP82YFL049W YOR214CQ12282 236 aa3.24□□□□□ -1.89
SWP82YFL049W YRA2P36036 203 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
SWP82YFL049W FMP46P36141 133 aaKnown RBP3.23□□□□□ -1.89
SWP82YFL049W ETR1P38071 380 aa3.23□□□□□ -1.89
SWP82YFL049W OM14P38325 134 aa3.23□□□□□ -1.89
SWP82YFL049W AVT6P40074 448 aa3.23□□□□□ -1.89
SWP82YFL049W SNM1P40993 198 aa3.23□□□□□ -1.89
SWP82YFL049W RPL22BP56628 122 aaKnown RBP3.23□□□□□ -1.89
SWP82YFL049W MCP1Q12106 302 aa3.23□□□□□ -1.89
SWP82YFL049W YNL277W-AQ3E7Z0 62 aa3.23□□□□□ -1.89
SWP82YFL049W RPB3P16370 318 aaKnown RBP3.22□□□□□ -1.89
SWP82YFL049W PCL1P24867 279 aa3.22□□□□□ -1.89
SWP82YFL049W PTC1P35182 281 aa3.22□□□□□ -1.89
SWP82YFL049W COS8P38723 381 aa3.22□□□□□ -1.89
SWP82YFL049W PRE5P40302 234 aaKnown RBP3.22□□□□□ -1.89
SWP82YFL049W TDA4P47153 279 aa3.22□□□□□ -1.89
SWP82YFL049W RPS12P48589 143 aaKnown RBP3.22□□□□□ -1.89
SWP82YFL049W YGR017WP53210 297 aa3.22□□□□□ -1.89
SWP82YFL049W SCW10Q04951 389 aa3.22□□□□□ -1.89
SWP82YFL049W YPR114WQ06107 315 aa3.22□□□□□ -1.89
SWP82YFL049W ATP5P09457 212 aa3.22□□□□□ -1.89
SWP82YFL049W NSP1P14907 823 aaKnown RBP3.22□□□□□ -1.89
SWP82YFL049W RPC19P28000 142 aaKnown RBP3.22□□□□□ -1.89
SWP82YFL049W YER181CP40097 107 aa3.22□□□□□ -1.89
SWP82YFL049W YNL200CP40165 246 aaKnown RBP3.22□□□□□ -1.89
SWP82YFL049W YFL019CP43576 117 aa3.22□□□□□ -1.89
SWP82YFL049W APJ1P53940 528 aa3.22□□□□□ -1.89
SWP82YFL049W RPL21AQ02753 160 aaKnown RBP3.22□□□□□ -1.89
SWP82YFL049W NAT3Q06504 195 aa3.22□□□□□ -1.89
SWP82YFL049W FYV12Q08559 129 aa3.22□□□□□ -1.89
SWP82YFL049W IZH2Q12442 317 aa3.22□□□□□ -1.89
SWP82YFL049W YML100W-AQ8TGT0 57 aa3.22□□□□□ -1.89
SWP82YFL049W TAO3P40468 2376 aa3.22□□□□□ -1.89
SWP82YFL049W YLR156WP0CE96 114 aa3.21□□□□□ -1.9
SWP82YFL049W YLR159WP0CE97 114 aa3.21□□□□□ -1.9
SWP82YFL049W YLR161WP0CE98 114 aa3.21□□□□□ -1.9
SWP82YFL049W YBR242WP38331 238 aa3.21□□□□□ -1.9
SWP82YFL049W SYS1P41544 203 aa3.21□□□□□ -1.9
SWP82YFL049W YFL067WP43537 175 aa3.21□□□□□ -1.9
SWP82YFL049W PIR1Q03178 341 aa3.21□□□□□ -1.9
SWP82YFL049W YDR115WQ04598 105 aa3.21□□□□□ -1.9
SWP82YFL049W ZEO1Q08245 113 aa3.21□□□□□ -1.9
SWP82YFL049W YPL264CQ08980 353 aa3.21□□□□□ -1.9
SWP82YFL049W OCA6Q12454 224 aa3.21□□□□□ -1.9
SWP82YFL049W YNL162W-AQ3E7A8 72 aa3.21□□□□□ -1.9
SWP82YFL049W ATP15P21306 62 aa3.2□□□□□ -1.9
SWP82YFL049W SRP21P32342 167 aa3.2□□□□□ -1.9
SWP82YFL049W GPI2P46961 280 aa3.2□□□□□ -1.9
SWP82YFL049W XPT1P47165 209 aa3.2□□□□□ -1.9
SWP82YFL049W BUD25P85052 153 aa3.2□□□□□ -1.9
SWP82YFL049W YML122CQ03207 126 aa3.2□□□□□ -1.9
SWP82YFL049W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
SWP82YFL049W YPL247CQ12523 523 aa3.2□□□□□ -1.9
SWP82YFL049W BOL1Q3E793 110 aa3.2□□□□□ -1.9
SWP82YFL049W VPS13Q07878 3144 aa3.2□□□□□ -1.9
SWP82YFL049W RPL14AP36105 138 aaKnown RBP3.2□□□□□ -1.9
SWP82YFL049W RPL14BP38754 138 aaKnown RBP3.2□□□□□ -1.9
SWP82YFL049W YND1P40009 630 aa3.2□□□□□ -1.9
SWP82YFL049W YIL152WP40455 235 aa3.2□□□□□ -1.9
SWP82YFL049W RPE1P46969 238 aa3.2□□□□□ -1.9
SWP82YFL049W YGL193CP53097 103 aa3.2□□□□□ -1.9
SWP82YFL049W YMR099CQ03161 297 aaKnown RBP3.2□□□□□ -1.9
SWP82YFL049W ECM19Q06011 112 aa3.2□□□□□ -1.9
SWP82YFL049W YOR020W-AQ3E824 90 aa3.2□□□□□ -1.9
SWP82YFL049W VAR1P02381 398 aa3.19□□□□□ -1.9
SWP82YFL049W RPB9P27999 122 aa3.19□□□□□ -1.9
SWP82YFL049W YOR062CP36025 268 aa3.19□□□□□ -1.9
SWP82YFL049W SHB17P36136 271 aaKnown RBP3.19□□□□□ -1.9
SWP82YFL049W FYV4P38783 130 aaPredicted RBP3.19□□□□□ -1.9
SWP82YFL049W AIF1P52923 378 aa3.19□□□□□ -1.9
SWP82YFL049W YNL033WP53964 284 aa3.19□□□□□ -1.9
SWP82YFL049W YNL019CP53975 284 aa3.19□□□□□ -1.9
SWP82YFL049W AIM11P87275 137 aa3.19□□□□□ -1.9
SWP82YFL049W API2Q04413 109 aa3.19□□□□□ -1.9
SWP82YFL049W YER078W-AQ3E7A2 54 aa3.19□□□□□ -1.9
SWP82YFL049W BET1P22804 142 aa3.18□□□□□ -1.9
SWP82YFL049W NSG1P38837 291 aa3.18□□□□□ -1.9
SWP82YFL049W VTC1P40046 129 aaRIP-Chip data3.18□□□□□ -1.9not detected
SWP82YFL049W EMC4P53073 190 aa3.18□□□□□ -1.9
SWP82YFL049W DAD3P69850 94 aa3.18□□□□□ -1.9
SWP82YFL049W TIF34P40217 347 aaKnown RBP3.18□□□□□ -1.9
SWP82YFL049W PFS2P42841 465 aaKnown RBP3.18□□□□□ -1.9
SWP82YFL049W MIC19P43594 170 aa3.18□□□□□ -1.9
SWP82YFL049W OSH6Q02201 448 aa3.18□□□□□ -1.9
SWP82YFL049W YLR042CQ07990 161 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 42 ms