RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C VTC1P40046 129 aaRIP-Chip data2.08□□□□□ -2.08not detected
MSH4YFL003C YER134CP40081 178 aa2.08□□□□□ -2.08
MSH4YFL003C YNL200CP40165 246 aaKnown RBP2.08□□□□□ -2.08
MSH4YFL003C GVP36P40531 326 aaKnown RBP2.08□□□□□ -2.08
MSH4YFL003C RBL2P48606 106 aaKnown RBP2.08□□□□□ -2.08
MSH4YFL003C AIF1P52923 378 aa2.08□□□□□ -2.08
MSH4YFL003C RAV2Q03956 351 aa2.08□□□□□ -2.08
MSH4YFL003C ECM11Q04110 302 aa2.08□□□□□ -2.08
MSH4YFL003C ODC2Q99297 307 aa2.08□□□□□ -2.08
MSH4YFL003C YDR274CP87283 123 aa2.08□□□□□ -2.08
MSH4YFL003C SPG3Q04398 127 aaPredicted RBP2.08□□□□□ -2.08
MSH4YFL003C YMR320WQ04897 101 aa2.08□□□□□ -2.08
MSH4YFL003C MOT1P32333 1867 aa2.07□□□□□ -2.08
MSH4YFL003C YAR023CD6VPM8 179 aa2.07□□□□□ -2.08
MSH4YFL003C DLS1P40366 167 aa2.07□□□□□ -2.08
MSH4YFL003C BUD13P46947 266 aaPredicted RBP2.07□□□□□ -2.08
MSH4YFL003C CSN9Q03981 162 aa2.07□□□□□ -2.08
MSH4YFL003C DUR1,2P32528 1835 aaKnown RBP2.07□□□□□ -2.08
MSH4YFL003C MSW1P04803 379 aa2.07□□□□□ -2.08
MSH4YFL003C STP22P25604 385 aa2.07□□□□□ -2.08
MSH4YFL003C PAN3P36102 679 aaPredicted RBP2.07□□□□□ -2.08
MSH4YFL003C SDH4P37298 181 aa2.07□□□□□ -2.08
MSH4YFL003C SPO73P40031 143 aa2.07□□□□□ -2.08
MSH4YFL003C YIR035CP40579 254 aa2.07□□□□□ -2.08
MSH4YFL003C CPA1P07258 411 aaKnown RBP2.06□□□□□ -2.08
MSH4YFL003C RPL30P14120 105 aaKnown RBP2.06□□□□□ -2.08
MSH4YFL003C FCY21P40039 528 aa2.06□□□□□ -2.08
MSH4YFL003C YIL059CP40520 121 aa2.06□□□□□ -2.08
MSH4YFL003C HHT1P61830 136 aa2.06□□□□□ -2.08
MSH4YFL003C FEX1Q08913 375 aa2.06□□□□□ -2.08
MSH4YFL003C FEX2Q08991 375 aa2.06□□□□□ -2.08
MSH4YFL003C VPS13Q07878 3144 aa2.06□□□□□ -2.08
MSH4YFL003C SCM4P32564 187 aa2.06□□□□□ -2.08
MSH4YFL003C CPR5P35176 225 aa2.06□□□□□ -2.08
MSH4YFL003C UMP1P38293 148 aa2.06□□□□□ -2.08
MSH4YFL003C YJR015WP47090 510 aa2.06□□□□□ -2.08
MSH4YFL003C YPR195CQ06594 109 aa2.06□□□□□ -2.08
MSH4YFL003C VPS71Q03433 280 aa2.05□□□□□ -2.08
MSH4YFL003C YLR361C-AQ3E795 98 aa2.05□□□□□ -2.08
MSH4YFL003C RIB3Q99258 208 aa2.05□□□□□ -2.08
MSH4YFL003C FYV4P38783 130 aaPredicted RBP2.05□□□□□ -2.08
MSH4YFL003C YHR180WP38868 163 aa2.05□□□□□ -2.08
MSH4YFL003C PGD1P40356 397 aa2.05□□□□□ -2.08
MSH4YFL003C YJR146WP47174 117 aa2.05□□□□□ -2.08
MSH4YFL003C DOC1P53068 250 aa2.05□□□□□ -2.08
MSH4YFL003C YMR099CQ03161 297 aaKnown RBP2.05□□□□□ -2.08
MSH4YFL003C NEJ1Q06148 342 aa2.05□□□□□ -2.08
MSH4YFL003C HRD1Q08109 551 aa2.05□□□□□ -2.08
MSH4YFL003C PST2Q12335 198 aaKnown RBP2.05□□□□□ -2.08
MSH4YFL003C ATO3Q12359 275 aa2.05□□□□□ -2.08
MSH4YFL003C TOR2P32600 2474 aaKnown RBP2.05□□□□□ -2.08
MSH4YFL003C POR1P04840 283 aaKnown RBP2.04□□□□□ -2.08
MSH4YFL003C KRE1P17260 313 aa2.04□□□□□ -2.08
MSH4YFL003C SNC2P33328 115 aa2.04□□□□□ -2.08
MSH4YFL003C YBR285WP38354 144 aa2.04□□□□□ -2.08
MSH4YFL003C CCC1P47818 322 aa2.04□□□□□ -2.08
MSH4YFL003C FMT1P32785 401 aa2.04□□□□□ -2.08
MSH4YFL003C YPL073CP40323 161 aa2.04□□□□□ -2.08
MSH4YFL003C FIP1P45976 327 aa2.04□□□□□ -2.08
MSH4YFL003C DYN2Q02647 92 aa2.04□□□□□ -2.08
MSH4YFL003C YDR114CQ04597 100 aa2.04□□□□□ -2.08
MSH4YFL003C RFU1Q08003 200 aa2.04□□□□□ -2.08
MSH4YFL003C YOR214CQ12282 236 aa2.04□□□□□ -2.08
MSH4YFL003C ATP5P09457 212 aa2.04□□□□□ -2.08
MSH4YFL003C TIR1P10863 254 aa2.04□□□□□ -2.08
MSH4YFL003C RSA4P25382 515 aaKnown RBP2.04□□□□□ -2.08
MSH4YFL003C SHE2P36068 246 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
MSH4YFL003C PHB1P40961 287 aa2.04□□□□□ -2.08
MSH4YFL003C YFR054CP43622 192 aa2.04□□□□□ -2.08
MSH4YFL003C MPC3P53311 146 aa2.04□□□□□ -2.08
MSH4YFL003C FSF1Q12029 327 aaKnown RBP2.04□□□□□ -2.08
MSH4YFL003C YDR524C-BQ3E6R4 66 aa2.04□□□□□ -2.08
MSH4YFL003C YHL026CP38740 315 aa2.03□□□□□ -2.08
MSH4YFL003C GLR1P41921 483 aaKnown RBP2.03□□□□□ -2.08
MSH4YFL003C ERJ5P43613 295 aaPredicted RBP2.03□□□□□ -2.08
MSH4YFL003C TIM13P53299 105 aa2.03□□□□□ -2.08
MSH4YFL003C FYV12Q08559 129 aa2.03□□□□□ -2.08
MSH4YFL003C RPL26AP05743 127 aaKnown RBP2.03□□□□□ -2.09
MSH4YFL003C SCL1P21243 252 aaKnown RBP2.03□□□□□ -2.09
MSH4YFL003C SUA7P29055 345 aaPredicted RBP2.03□□□□□ -2.09
MSH4YFL003C PRS3P38689 320 aaKnown RBP2.03□□□□□ -2.09
MSH4YFL003C RPL26BP53221 127 aaKnown RBP2.03□□□□□ -2.09
MSH4YFL003C UBC7Q02159 165 aa2.03□□□□□ -2.09
MSH4YFL003C COF1Q03048 143 aaKnown RBP2.03□□□□□ -2.09
MSH4YFL003C GAL83Q04739 417 aa2.03□□□□□ -2.09
MSH4YFL003C RAD50P12753 1312 aa2.02□□□□□ -2.09
MSH4YFL003C NSP1P14907 823 aaKnown RBP2.02□□□□□ -2.09
MSH4YFL003C VMA22P38784 181 aa2.02□□□□□ -2.09
MSH4YFL003C NSA2P40078 261 aaKnown RBP2.02□□□□□ -2.09
MSH4YFL003C YER181CP40097 107 aa2.02□□□□□ -2.09
MSH4YFL003C MRPS8Q03799 155 aa2.02□□□□□ -2.09
MSH4YFL003C SPC24Q04477 213 aa2.02□□□□□ -2.09
MSH4YFL003C ATP20Q12233 115 aa2.02□□□□□ -2.09
MSH4YFL003C RIF1P29539 1916 aa2.02□□□□□ -2.09
MSH4YFL003C YNR062CP53748 327 aa2.02□□□□□ -2.09
MSH4YFL003C DIG2Q03373 323 aaKnown RBP2.02□□□□□ -2.09
MSH4YFL003C MYO1P08964 1928 aa2.01□□□□□ -2.09
MSH4YFL003C NHP6AP11632 93 aaKnown RBP2.01□□□□□ -2.09
MSH4YFL003C SEN2P16658 377 aa2.01□□□□□ -2.09
MSH4YFL003C RPC19P28000 142 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms