RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C SAY1P53324 424 aa2.64□□□□□ -1.99
SPB4YFL002C POP3P53833 195 aaPredicted RBP2.64□□□□□ -1.99
SPB4YFL002C CYT2Q00873 224 aa2.64□□□□□ -1.99
SPB4YFL002C MIX17Q03667 156 aa2.64□□□□□ -1.99
SPB4YFL002C CGI121Q03705 181 aaKnown RBP2.64□□□□□ -1.99
SPB4YFL002C RIM9Q04734 239 aa2.64□□□□□ -1.99
SPB4YFL002C SEC11P15367 167 aa2.63□□□□□ -1.99
SPB4YFL002C SRP21P32342 167 aa2.63□□□□□ -1.99
SPB4YFL002C TFC1P32367 649 aa2.63□□□□□ -1.99
SPB4YFL002C SHB17P36136 271 aaKnown RBP2.63□□□□□ -1.99
SPB4YFL002C GLC8P41818 229 aa2.63□□□□□ -1.99
SPB4YFL002C KNH1P50112 268 aa2.63□□□□□ -1.99
SPB4YFL002C LIP1Q03579 150 aa2.63□□□□□ -1.99
SPB4YFL002C YOR015WQ12169 119 aa2.63□□□□□ -1.99
SPB4YFL002C YNR064CP53750 290 aa2.63□□□□□ -1.99
SPB4YFL002C SPC24Q04477 213 aa2.63□□□□□ -1.99
SPB4YFL002C HSP12P22943 109 aaKnown RBP2.62□□□□□ -1.99
SPB4YFL002C RPS20P38701 121 aaKnown RBP2.62□□□□□ -1.99
SPB4YFL002C PAC10P48363 199 aa2.62□□□□□ -1.99
SPB4YFL002C DML1Q03652 475 aa2.62□□□□□ -1.99
SPB4YFL002C ATG10Q07879 167 aa2.62□□□□□ -1.99
SPB4YFL002C AYR1P40471 297 aa2.61□□□□□ -1.99
SPB4YFL002C MET5P47169 1442 aa2.61□□□□□ -1.99
SPB4YFL002C RCF2P53721 224 aa2.61□□□□□ -1.99
SPB4YFL002C DAD4P69851 72 aa2.61□□□□□ -1.99
SPB4YFL002C EST3Q03096 181 aa2.61□□□□□ -1.99
SPB4YFL002C PIR1Q03178 341 aa2.61□□□□□ -1.99
SPB4YFL002C YPR114WQ06107 315 aa2.61□□□□□ -1.99
SPB4YFL002C CNL1Q06333 122 aa2.61□□□□□ -1.99
SPB4YFL002C YPR174CQ06616 221 aaPredicted RBP2.61□□□□□ -1.99
SPB4YFL002C SPC3Q12133 184 aa2.61□□□□□ -1.99
SPB4YFL002C MRS4P23500 304 aa2.61□□□□□ -1.99
SPB4YFL002C YPT31P38555 223 aaKnown RBP2.61□□□□□ -1.99
SPB4YFL002C NKP2Q06162 153 aa2.61□□□□□ -1.99
SPB4YFL002C ANT1Q06497 328 aa2.61□□□□□ -1.99
SPB4YFL002C PRP11Q07350 266 aaPredicted RBP2.61□□□□□ -1.99
SPB4YFL002C FCY1Q12178 158 aa2.61□□□□□ -1.99
SPB4YFL002C WIP1Q2V2P8 89 aa2.61□□□□□ -1.99
SPB4YFL002C YOL162WP0CF19 215 aa2.6□□□□□ -1.99
SPB4YFL002C GPA2P10823 449 aa2.6□□□□□ -1.99
SPB4YFL002C SEN2P16658 377 aa2.6□□□□□ -1.99
SPB4YFL002C DDR48P18899 430 aaKnown RBP2.6□□□□□ -1.99
SPB4YFL002C GSP2P32836 220 aaKnown RBP2.6□□□□□ -1.99
SPB4YFL002C DSE2P38844 325 aa2.6□□□□□ -1.99
SPB4YFL002C APS3P47064 194 aa2.6□□□□□ -1.99
SPB4YFL002C VMA10P48836 114 aaKnown RBP2.6□□□□□ -1.99
SPB4YFL002C THG1P53215 237 aaKnown RBP2.6□□□□□ -1.99
SPB4YFL002C SML1Q04964 104 aa2.6□□□□□ -1.99
SPB4YFL002C AHT1P29589 182 aa2.59□□□□□ -1.99
SPB4YFL002C UTR5P32630 166 aa2.59□□□□□ -1.99
SPB4YFL002C SUI1P32911 108 aaKnown RBP2.59□□□□□ -1.99
SPB4YFL002C YHR140WP38842 239 aa2.59□□□□□ -1.99
SPB4YFL002C YNL019CP53975 284 aa2.59□□□□□ -1.99
SPB4YFL002C UPS3Q04006 179 aa2.59□□□□□ -1.99
SPB4YFL002C RRT7Q07829 113 aa2.59□□□□□ -1.99
SPB4YFL002C ATG41Q12048 136 aa2.59□□□□□ -1.99
SPB4YFL002C SLO1Q3E784 85 aa2.59□□□□□ -1.99
SPB4YFL002C NSE4P43124 402 aa2.58□□□□□ -2
SPB4YFL002C UPS1Q05776 175 aa2.58□□□□□ -2
SPB4YFL002C FAB1P34756 2278 aa2.58□□□□□ -2
SPB4YFL002C YHL018WP38744 120 aaPredicted RBP2.58□□□□□ -2
SPB4YFL002C GEP7P53171 287 aa2.58□□□□□ -2
SPB4YFL002C YHP1Q04116 353 aa2.58□□□□□ -2
SPB4YFL002C UIP4Q08926 304 aa2.58□□□□□ -2
SPB4YFL002C FMP49A0A023PZB3 126 aa2.57□□□□□ -2
SPB4YFL002C COX8P04039 78 aa2.57□□□□□ -2
SPB4YFL002C TRS20P38334 175 aa2.57□□□□□ -2
SPB4YFL002C DAN1P47178 298 aa2.57□□□□□ -2
SPB4YFL002C BUD25P85052 153 aa2.57□□□□□ -2
SPB4YFL002C SDH7Q04401 133 aa2.57□□□□□ -2
SPB4YFL002C FRQ1Q06389 190 aa2.57□□□□□ -2
SPB4YFL002C YNL277W-AQ3E7Z0 62 aa2.57□□□□□ -2
SPB4YFL002C MSB2P32334 1306 aa2.57□□□□□ -2
SPB4YFL002C INO4P13902 151 aa2.56□□□□□ -2
SPB4YFL002C MAK31P23059 88 aa2.56□□□□□ -2
SPB4YFL002C MRP49P32388 137 aa2.56□□□□□ -2
SPB4YFL002C YGR017WP53210 297 aa2.56□□□□□ -2
SPB4YFL002C ECM5Q03214 1411 aa2.56□□□□□ -2
SPB4YFL002C MDH2P22133 377 aa2.56□□□□□ -2
SPB4YFL002C HYM1P32464 399 aa2.56□□□□□ -2
SPB4YFL002C RPL14AP36105 138 aaKnown RBP2.56□□□□□ -2
SPB4YFL002C RPL14BP38754 138 aaKnown RBP2.56□□□□□ -2
SPB4YFL002C YML079WQ03629 201 aa2.56□□□□□ -2
SPB4YFL002C SPS2P08459 502 aa2.55□□□□□ -2
SPB4YFL002C NOP1P15646 327 aaKnown RBP2.55□□□□□ -2
SPB4YFL002C RPS1AP33442 255 aaKnown RBP2.55□□□□□ -2
SPB4YFL002C TMA19P35691 167 aaKnown RBP2.55□□□□□ -2
SPB4YFL002C VMA7P39111 118 aa2.55□□□□□ -2
SPB4YFL002C MOB1P40484 314 aa2.55□□□□□ -2
SPB4YFL002C CCS1P40202 249 aaKnown RBP2.54□□□□□ -2
SPB4YFL002C CSI2Q08054 341 aa2.54□□□□□ -2
SPB4YFL002C SCS22Q6Q595 175 aa2.54□□□□□ -2
SPB4YFL002C Q0144Q9ZZW2 109 aa2.54□□□□□ -2
SPB4YFL002C RPO41P13433 1351 aaKnown RBP2.54□□□□□ -2
SPB4YFL002C MDM35O60200 86 aa2.54□□□□□ -2
SPB4YFL002C YEL067CP39978 195 aa2.54□□□□□ -2
SPB4YFL002C MPM1P40364 252 aa2.54□□□□□ -2
SPB4YFL002C RGM1Q00453 211 aa2.54□□□□□ -2
SPB4YFL002C YDL241WQ07738 123 aa2.54□□□□□ -2
SPB4YFL002C FIT2Q08906 153 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 114.9 ms