RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W SUA7P29055 345 aaPredicted RBP1.97□□□□□ -2.09
PRE1YER012W ERG2P32352 222 aa1.97□□□□□ -2.09
PRE1YER012W YUH1P35127 236 aa1.97□□□□□ -2.09
PRE1YER012W TMA19P35691 167 aaKnown RBP1.97□□□□□ -2.09
PRE1YER012W MBA1P38300 278 aa1.97□□□□□ -2.09
PRE1YER012W MED8P38304 223 aa1.97□□□□□ -2.09
PRE1YER012W HTD2P38790 280 aaKnown RBP1.97□□□□□ -2.09
PRE1YER012W BDH1P39714 382 aa1.97□□□□□ -2.09
PRE1YER012W MSS2P40990 351 aa1.97□□□□□ -2.09
PRE1YER012W CAT5P41735 233 aa1.97□□□□□ -2.09
PRE1YER012W DIE2P50076 525 aa1.97□□□□□ -2.09
PRE1YER012W TPN1P53099 579 aa1.97□□□□□ -2.09
PRE1YER012W ERV29P53337 310 aa1.97□□□□□ -2.09
PRE1YER012W VBA1Q04301 562 aa1.97□□□□□ -2.09
PRE1YER012W GRH1Q04410 372 aaKnown RBP1.97□□□□□ -2.09
PRE1YER012W HOR7Q05827 59 aa1.97□□□□□ -2.09
PRE1YER012W KEI1Q06346 221 aa1.97□□□□□ -2.09
PRE1YER012W IES3Q12345 250 aa1.97□□□□□ -2.09
PRE1YER012W YAL063C-AQ3E791 96 aa1.97□□□□□ -2.09
PRE1YER012W YPR108W-AQ3E7B3 70 aa1.97□□□□□ -2.09
PRE1YER012W PET494P07390 489 aaPredicted RBP1.96□□□□□ -2.1
PRE1YER012W YGL041W-AP0C5N3 154 aa1.96□□□□□ -2.1
PRE1YER012W ROX3P25046 220 aa1.96□□□□□ -2.1
PRE1YER012W POF1P25576 258 aa1.96□□□□□ -2.1
PRE1YER012W AHC2P25649 128 aa1.96□□□□□ -2.1
PRE1YER012W RNP1P32385 249 aa1.96□□□□□ -2.1
PRE1YER012W UTP30P36144 274 aaKnown RBP1.96□□□□□ -2.1
PRE1YER012W GOS1P38736 223 aa1.96□□□□□ -2.1
PRE1YER012W IKI1P38874 309 aa1.96□□□□□ -2.1
PRE1YER012W PDS1P40316 373 aaPredicted RBP1.96□□□□□ -2.1
PRE1YER012W SOL1P50278 321 aa1.96□□□□□ -2.1
PRE1YER012W RPL9BP51401 191 aaKnown RBP1.96□□□□□ -2.1
PRE1YER012W YGL118CP53132 145 aa1.96□□□□□ -2.1
PRE1YER012W CAX4P53223 239 aa1.96□□□□□ -2.1
PRE1YER012W SLX9P53251 210 aaPredicted RBP1.96□□□□□ -2.1
PRE1YER012W ACT1P60010 375 aaKnown RBP1.96□□□□□ -2.1
PRE1YER012W RRP17Q04031 235 aaPredicted RBP1.96□□□□□ -2.1
PRE1YER012W YHP1Q04116 353 aa1.96□□□□□ -2.1
PRE1YER012W LOA1Q06508 300 aa1.96□□□□□ -2.1
PRE1YER012W NOC4Q06512 552 aaPredicted RBP1.96□□□□□ -2.1
PRE1YER012W FEX2Q08991 375 aa1.96□□□□□ -2.1
PRE1YER012W DGK1Q12382 290 aa1.96□□□□□ -2.1
PRE1YER012W YLR365WQ7LIF2 110 aa1.96□□□□□ -2.1
PRE1YER012W URA6P15700 204 aa1.95□□□□□ -2.1
PRE1YER012W FUS3P16892 353 aaKnown RBP1.95□□□□□ -2.1
PRE1YER012W PHO85P17157 305 aa1.95□□□□□ -2.1
PRE1YER012W IFM1P25038 676 aa1.95□□□□□ -2.1
PRE1YER012W MRPL38P35996 138 aaPredicted RBP1.95□□□□□ -2.1
PRE1YER012W SHE2P36068 246 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
PRE1YER012W PRS4P38063 326 aaPredicted RBP1.95□□□□□ -2.1
PRE1YER012W SNU13P39990 126 aaKnown RBP1.95□□□□□ -2.1
PRE1YER012W GLE2P40066 365 aa1.95□□□□□ -2.1
PRE1YER012W YER137CP40083 148 aaKnown RBP1.95□□□□□ -2.1
PRE1YER012W GNA1P43577 159 aaPredicted RBP1.95□□□□□ -2.1
PRE1YER012W ILM1P47155 203 aa1.95□□□□□ -2.1
PRE1YER012W TOS8P53147 276 aa1.95□□□□□ -2.1
PRE1YER012W CTF19Q02732 369 aa1.95□□□□□ -2.1
PRE1YER012W NEJ1Q06148 342 aa1.95□□□□□ -2.1
PRE1YER012W SYM1Q06563 197 aa1.95□□□□□ -2.1
PRE1YER012W FEX1Q08913 375 aa1.95□□□□□ -2.1
PRE1YER012W ATG5Q12380 294 aa1.95□□□□□ -2.1
PRE1YER012W BOL1Q3E793 110 aa1.95□□□□□ -2.1
PRE1YER012W COX2P00410 251 aa1.94□□□□□ -2.1
PRE1YER012W HTB1P02293 131 aaKnown RBP1.94□□□□□ -2.1
PRE1YER012W YCR101CP25607 182 aa1.94□□□□□ -2.1
PRE1YER012W SUA5P32579 426 aa1.94□□□□□ -2.1
PRE1YER012W YAR068WP39564 161 aa1.94□□□□□ -2.1
PRE1YER012W LST8P41318 303 aa1.94□□□□□ -2.1
PRE1YER012W SYS1P41544 203 aa1.94□□□□□ -2.1
PRE1YER012W ARP3P47117 449 aaKnown RBP1.94□□□□□ -2.1
PRE1YER012W VMA10P48836 114 aaKnown RBP1.94□□□□□ -2.1
PRE1YER012W RSM27P53305 110 aa1.94□□□□□ -2.1
PRE1YER012W YML018CQ03730 393 aa1.94□□□□□ -2.1
PRE1YER012W ATC1Q04005 294 aa1.94□□□□□ -2.1
PRE1YER012W RDS3Q06835 107 aaPredicted RBP1.94□□□□□ -2.1
PRE1YER012W YPD1Q07688 167 aa1.94□□□□□ -2.1
PRE1YER012W YLR031WQ07978 186 aa1.94□□□□□ -2.1
PRE1YER012W QCR7P00128 127 aa1.93□□□□□ -2.1
PRE1YER012W RPL9AP05738 191 aaKnown RBP1.93□□□□□ -2.1
PRE1YER012W RFA3P26755 122 aaKnown RBP1.93□□□□□ -2.1
PRE1YER012W TRR1P29509 319 aaKnown RBP1.93□□□□□ -2.1
PRE1YER012W HOM6P31116 359 aaKnown RBP1.93□□□□□ -2.1
PRE1YER012W AIM29P36154 155 aa1.93□□□□□ -2.1
PRE1YER012W MRPL3P36516 390 aa1.93□□□□□ -2.1
PRE1YER012W YBL081WP38180 368 aaKnown RBP1.93□□□□□ -2.1
PRE1YER012W ECM33P38248 429 aaKnown RBP1.93□□□□□ -2.1
PRE1YER012W YPT31P38555 223 aaKnown RBP1.93□□□□□ -2.1
PRE1YER012W ASP1P38986 381 aaPredicted RBP1.93□□□□□ -2.1
PRE1YER012W EDC2P40023 145 aaPredicted RBP1.93□□□□□ -2.1
PRE1YER012W COX15P40086 486 aa1.93□□□□□ -2.1
PRE1YER012W YIL059CP40520 121 aa1.93□□□□□ -2.1
PRE1YER012W MRPL49P40858 161 aaPredicted RBP1.93□□□□□ -2.1
PRE1YER012W BNA6P43619 295 aa1.93□□□□□ -2.1
PRE1YER012W HAM1P47119 197 aaKnown RBP1.93□□□□□ -2.1
PRE1YER012W CWC23P52868 283 aaPredicted RBP1.93□□□□□ -2.1
PRE1YER012W YGR219WP53307 113 aa1.93□□□□□ -2.1
PRE1YER012W SMD1Q02260 146 aaPredicted RBP1.93□□□□□ -2.1
PRE1YER012W DYN2Q02647 92 aa1.93□□□□□ -2.1
PRE1YER012W SRL4Q03085 281 aa1.93□□□□□ -2.1
PRE1YER012W THI74Q04083 370 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms