RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C SER2P42941 309 aa0.85□□□□□ -2.27
SEC3YER008C ERJ5P43613 295 aaPredicted RBP0.85□□□□□ -2.27
SEC3YER008C UBC7Q02159 165 aa0.85□□□□□ -2.27
SEC3YER008C SMD1Q02260 146 aaPredicted RBP0.85□□□□□ -2.27
SEC3YER008C PLP1Q04004 230 aa0.85□□□□□ -2.27
SEC3YER008C EFG1Q3E705 233 aaKnown RBP0.85□□□□□ -2.27
SEC3YER008C VMA11P32842 164 aa0.85□□□□□ -2.27
SEC3YER008C SKG1P36169 355 aa0.85□□□□□ -2.27
SEC3YER008C YHL026CP38740 315 aa0.85□□□□□ -2.27
SEC3YER008C CCC1P47818 322 aa0.85□□□□□ -2.27
SEC3YER008C PGA1P53896 198 aa0.85□□□□□ -2.27
SEC3YER008C BUD25P85052 153 aa0.85□□□□□ -2.27
SEC3YER008C NEJ1Q06148 342 aa0.85□□□□□ -2.27
SEC3YER008C YOR268CQ08734 132 aa0.85□□□□□ -2.27
SEC3YER008C AKR2Q12013 749 aa0.85□□□□□ -2.27
SEC3YER008C POR1P04840 283 aaKnown RBP0.84□□□□□ -2.27
SEC3YER008C SPO13P23624 291 aa0.84□□□□□ -2.27
SEC3YER008C TKL2P33315 681 aa0.84□□□□□ -2.27
SEC3YER008C PTC1P35182 281 aa0.84□□□□□ -2.27
SEC3YER008C PAM17P36147 197 aa0.84□□□□□ -2.27
SEC3YER008C APQ12P40532 138 aa0.84□□□□□ -2.27
SEC3YER008C TTI2P47168 421 aa0.84□□□□□ -2.27
SEC3YER008C COS6P53344 381 aa0.84□□□□□ -2.27
SEC3YER008C DYN2Q02647 92 aa0.84□□□□□ -2.27
SEC3YER008C MPD1Q12404 318 aaKnown RBP0.84□□□□□ -2.27
SEC3YER008C PSF1Q12488 208 aa0.84□□□□□ -2.27
SEC3YER008C BET1P22804 142 aa0.84□□□□□ -2.28
SEC3YER008C MID2P36027 376 aa0.84□□□□□ -2.28
SEC3YER008C YBR220CP38318 560 aa0.84□□□□□ -2.28
SEC3YER008C VMA22P38784 181 aa0.84□□□□□ -2.28
SEC3YER008C YEL028WP39989 153 aa0.84□□□□□ -2.28
SEC3YER008C FIS1P40515 155 aa0.84□□□□□ -2.28
SEC3YER008C GAT4P40569 121 aa0.84□□□□□ -2.28
SEC3YER008C YIR035CP40579 254 aa0.84□□□□□ -2.28
SEC3YER008C SFT1P43682 97 aa0.84□□□□□ -2.28
SEC3YER008C MNN5P46982 586 aa0.84□□□□□ -2.28
SEC3YER008C MOG1P47123 218 aa0.84□□□□□ -2.28
SEC3YER008C MAK3Q03503 176 aa0.84□□□□□ -2.28
SEC3YER008C HRD1Q08109 551 aa0.84□□□□□ -2.28
SEC3YER008C MRPL17P36528 281 aa0.84□□□□□ -2.28
SEC3YER008C UFE1P41834 346 aa0.84□□□□□ -2.28
SEC3YER008C Q0144Q9ZZW2 109 aa0.84□□□□□ -2.28
SEC3YER008C CDC8P00572 216 aa0.83□□□□□ -2.28
SEC3YER008C NHP6AP11632 93 aaKnown RBP0.83□□□□□ -2.28
SEC3YER008C TVP38P36164 337 aa0.83□□□□□ -2.28
SEC3YER008C POP4P38336 279 aa0.83□□□□□ -2.28
SEC3YER008C AVT2P39981 480 aa0.83□□□□□ -2.28
SEC3YER008C OST2P46964 130 aa0.83□□□□□ -2.28
SEC3YER008C DSK2P48510 373 aa0.83□□□□□ -2.28
SEC3YER008C HHT1P61830 136 aa0.83□□□□□ -2.28
SEC3YER008C VPS71Q03433 280 aa0.83□□□□□ -2.28
SEC3YER008C FEX1Q08913 375 aa0.83□□□□□ -2.28
SEC3YER008C FEX2Q08991 375 aa0.83□□□□□ -2.28
SEC3YER008C SPC3Q12133 184 aa0.83□□□□□ -2.28
SEC3YER008C RPL9AP05738 191 aaKnown RBP0.83□□□□□ -2.28
SEC3YER008C TIR1P10863 254 aa0.83□□□□□ -2.28
SEC3YER008C MAK31P23059 88 aa0.83□□□□□ -2.28
SEC3YER008C STP22P25604 385 aa0.83□□□□□ -2.28
SEC3YER008C TEM1P38987 245 aa0.83□□□□□ -2.28
SEC3YER008C YPL073CP40323 161 aa0.83□□□□□ -2.28
SEC3YER008C RPL9BP51401 191 aaKnown RBP0.83□□□□□ -2.28
SEC3YER008C AIF1P52923 378 aa0.83□□□□□ -2.28
SEC3YER008C TVP15Q03860 143 aa0.83□□□□□ -2.28
SEC3YER008C YPR195CQ06594 109 aa0.83□□□□□ -2.28
SEC3YER008C YEL009C-AA0A023PZF2 135 aa0.83□□□□□ -2.28
SEC3YER008C HSP26P15992 214 aaKnown RBP RIP-Chip data0.83□□□□□ -2.28not detected
SEC3YER008C MAG1P22134 296 aaKnown RBP0.83□□□□□ -2.28
SEC3YER008C SUA7P29055 345 aaPredicted RBP0.83□□□□□ -2.28
SEC3YER008C PAN3P36102 679 aaPredicted RBP0.83□□□□□ -2.28
SEC3YER008C RPS20P38701 121 aaKnown RBP0.83□□□□□ -2.28
SEC3YER008C EFM1P38732 585 aa0.83□□□□□ -2.28
SEC3YER008C MED6P38782 295 aa0.83□□□□□ -2.28
SEC3YER008C YNL200CP40165 246 aaKnown RBP0.83□□□□□ -2.28
SEC3YER008C HPM1P40481 377 aa0.83□□□□□ -2.28
SEC3YER008C YIL054WP40524 105 aa0.83□□□□□ -2.28
SEC3YER008C ILM1P47155 203 aa0.83□□□□□ -2.28
SEC3YER008C VMA10P48836 114 aaKnown RBP0.83□□□□□ -2.28
SEC3YER008C SAY1P53324 424 aa0.83□□□□□ -2.28
SEC3YER008C YKR005CQ02203 525 aa0.83□□□□□ -2.28
SEC3YER008C PKR1Q03880 122 aaKnown RBP0.83□□□□□ -2.28
SEC3YER008C YDL241WQ07738 123 aa0.83□□□□□ -2.28
SEC3YER008C YDL180WQ12301 547 aa0.83□□□□□ -2.28
SEC3YER008C IES3Q12345 250 aa0.83□□□□□ -2.28
SEC3YER008C FAB1P34756 2278 aa0.83□□□□□ -2.28
SEC3YER008C YRA2P36036 203 aaKnown RBP RIP-Chip data0.82□□□□□ -2.28not detected
SEC3YER008C YJR146WP47174 117 aa0.82□□□□□ -2.28
SEC3YER008C EST3Q03096 181 aa0.82□□□□□ -2.28
SEC3YER008C YDR114CQ04597 100 aa0.82□□□□□ -2.28
SEC3YER008C YOR289WQ12012 251 aaPredicted RBP0.82□□□□□ -2.28
SEC3YER008C YOR020W-AQ3E824 90 aa0.82□□□□□ -2.28
SEC3YER008C YAR023CD6VPM8 179 aa0.82□□□□□ -2.28
SEC3YER008C ATP5P09457 212 aa0.82□□□□□ -2.28
SEC3YER008C YER039C-AP0CD97 72 aa0.82□□□□□ -2.28
SEC3YER008C YCR101CP25607 182 aa0.82□□□□□ -2.28
SEC3YER008C FZF1P32805 299 aa0.82□□□□□ -2.28
SEC3YER008C GAA1P39012 614 aa0.82□□□□□ -2.28
SEC3YER008C TIF34P40217 347 aaKnown RBP0.82□□□□□ -2.28
SEC3YER008C RAV2Q03956 351 aa0.82□□□□□ -2.28
SEC3YER008C WIP1Q2V2P8 89 aa0.82□□□□□ -2.28
SEC3YER008C YGL088WP53151 121 aa0.82□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 175.3 ms