RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W YEL073CP39974 107 aa0.44□□□□□ -2.34
LCD1YDR499W YEL028WP39989 153 aa0.44□□□□□ -2.34
LCD1YDR499W GLR1P41921 483 aaKnown RBP0.44□□□□□ -2.34
LCD1YDR499W XPT1P47165 209 aa0.44□□□□□ -2.34
LCD1YDR499W HHT1P61830 136 aa0.44□□□□□ -2.34
LCD1YDR499W SYM1Q06563 197 aa0.44□□□□□ -2.34
LCD1YDR499W TRM3Q07527 1436 aa0.44□□□□□ -2.34
LCD1YDR499W NUF2P33895 451 aa0.44□□□□□ -2.34
LCD1YDR499W CSH1P38287 376 aa0.44□□□□□ -2.34
LCD1YDR499W PAC10P48363 199 aa0.44□□□□□ -2.34
LCD1YDR499W NQM1P53228 333 aaPredicted RBP0.44□□□□□ -2.34
LCD1YDR499W PLP1Q04004 230 aa0.44□□□□□ -2.34
LCD1YDR499W YLR050CQ12155 161 aaKnown RBP0.44□□□□□ -2.34
LCD1YDR499W YKR070WP36151 352 aaKnown RBP0.43□□□□□ -2.34
LCD1YDR499W SRP14P38985 146 aa0.43□□□□□ -2.34
LCD1YDR499W YGR269WP40326 108 aa0.43□□□□□ -2.34
LCD1YDR499W MOB1P40484 314 aa0.43□□□□□ -2.34
LCD1YDR499W DCV1P43595 202 aa0.43□□□□□ -2.34
LCD1YDR499W YGL230CP53074 147 aa0.43□□□□□ -2.34
LCD1YDR499W YNL140CP53910 189 aa0.43□□□□□ -2.34
LCD1YDR499W YML079WQ03629 201 aa0.43□□□□□ -2.34
LCD1YDR499W THI74Q04083 370 aa0.43□□□□□ -2.34
LCD1YDR499W AVO2Q04749 426 aa0.43□□□□□ -2.34
LCD1YDR499W CCW12Q12127 133 aa0.43□□□□□ -2.34
LCD1YDR499W SHB17P36136 271 aaKnown RBP0.42□□□□□ -2.34
LCD1YDR499W YAR064WP39563 99 aa0.42□□□□□ -2.34
LCD1YDR499W HSK3P69852 69 aa0.42□□□□□ -2.34
LCD1YDR499W YDL157CQ12082 118 aa0.42□□□□□ -2.34
LCD1YDR499W CMD1P06787 147 aaKnown RBP0.42□□□□□ -2.34
LCD1YDR499W YIL102CP40488 101 aa0.42□□□□□ -2.34
LCD1YDR499W YDC1Q02896 317 aa0.42□□□□□ -2.34
LCD1YDR499W HRD1Q08109 551 aa0.42□□□□□ -2.34
LCD1YDR499W CHD1P32657 1468 aa0.42□□□□□ -2.34
LCD1YDR499W RIF1P29539 1916 aa0.41□□□□□ -2.34
LCD1YDR499W INO4P13902 151 aa0.41□□□□□ -2.34
LCD1YDR499W PRE1P22141 198 aaKnown RBP0.41□□□□□ -2.34
LCD1YDR499W YJR015WP47090 510 aa0.41□□□□□ -2.34
LCD1YDR499W LIP1Q03579 150 aa0.41□□□□□ -2.34
LCD1YDR499W GIM5Q04493 163 aa0.41□□□□□ -2.34
LCD1YDR499W PRP8P33334 2413 aaKnown RBP0.41□□□□□ -2.34
LCD1YDR499W SPS2P08459 502 aa0.41□□□□□ -2.34
LCD1YDR499W TMA20P89886 181 aaPredicted RBP0.41□□□□□ -2.34
LCD1YDR499W KEI1Q06346 221 aa0.41□□□□□ -2.34
LCD1YDR499W YDL241WQ07738 123 aa0.41□□□□□ -2.34
LCD1YDR499W ATG10Q07879 167 aa0.41□□□□□ -2.34
LCD1YDR499W FMP49A0A023PZB3 126 aa0.4□□□□□ -2.35
LCD1YDR499W RPS25BP0C0T4 108 aaKnown RBP0.4□□□□□ -2.35
LCD1YDR499W PTC1P35182 281 aa0.4□□□□□ -2.35
LCD1YDR499W YPT31P38555 223 aaKnown RBP0.4□□□□□ -2.35
LCD1YDR499W YPR114WQ06107 315 aa0.4□□□□□ -2.35
LCD1YDR499W FCY1Q12178 158 aa0.4□□□□□ -2.35
LCD1YDR499W RPS25AQ3E792 108 aaPredicted RBP0.4□□□□□ -2.35
LCD1YDR499W TAF2P23255 1407 aa0.4□□□□□ -2.35
LCD1YDR499W KIN28P06242 306 aa0.4□□□□□ -2.35
LCD1YDR499W UBI4P0CG63 381 aaKnown RBP0.4□□□□□ -2.35
LCD1YDR499W YER121WP40076 114 aa0.4□□□□□ -2.35
LCD1YDR499W GLC8P41818 229 aa0.4□□□□□ -2.35
LCD1YDR499W GEP7P53171 287 aa0.4□□□□□ -2.35
LCD1YDR499W TMA23Q03525 211 aa0.4□□□□□ -2.35
LCD1YDR499W YDR102CQ03864 110 aa0.4□□□□□ -2.35
LCD1YDR499W UIP4Q08926 304 aa0.4□□□□□ -2.35
LCD1YDR499W CDC39P25655 2108 aaKnown RBP0.39□□□□□ -2.35
LCD1YDR499W SAC3P46674 1301 aa0.39□□□□□ -2.35
LCD1YDR499W ATP5P09457 212 aa0.39□□□□□ -2.35
LCD1YDR499W YOL013W-AP0C272 63 aaPredicted RBP0.39□□□□□ -2.35
LCD1YDR499W SRP102P36057 244 aaPredicted RBP0.39□□□□□ -2.35
LCD1YDR499W VPS51P36116 164 aa0.39□□□□□ -2.35
LCD1YDR499W APS3P47064 194 aa0.39□□□□□ -2.35
LCD1YDR499W YGL101WP53144 215 aa0.39□□□□□ -2.35
LCD1YDR499W YNR064CP53750 290 aa0.39□□□□□ -2.35
LCD1YDR499W RDI1Q12434 202 aa0.39□□□□□ -2.35
LCD1YDR499W CMC4Q3E7A9 73 aa0.39□□□□□ -2.35
LCD1YDR499W SPT14P32363 452 aa0.38□□□□□ -2.35
LCD1YDR499W UBC6P33296 250 aaPredicted RBP0.38□□□□□ -2.35
LCD1YDR499W CCC1P47818 322 aa0.38□□□□□ -2.35
LCD1YDR499W ORM1P53224 222 aa0.38□□□□□ -2.35
LCD1YDR499W YLR046CQ12253 270 aa0.38□□□□□ -2.35
LCD1YDR499W YEL014CP39999 101 aa0.38□□□□□ -2.35
LCD1YDR499W CIN5P40917 295 aa0.38□□□□□ -2.35
LCD1YDR499W LSM3P57743 89 aaKnown RBP0.38□□□□□ -2.35
LCD1YDR499W CMC2Q3E7A4 109 aa0.38□□□□□ -2.35
LCD1YDR499W MRS4P23500 304 aa0.37□□□□□ -2.35
LCD1YDR499W YCR001WP25347 104 aa0.37□□□□□ -2.35
LCD1YDR499W ECM31P38122 312 aa0.37□□□□□ -2.35
LCD1YDR499W YBR027CP38220 110 aa0.37□□□□□ -2.35
LCD1YDR499W FES1P38260 290 aa0.37□□□□□ -2.35
LCD1YDR499W HTD2P38790 280 aaKnown RBP0.37□□□□□ -2.35
LCD1YDR499W VAM10Q08474 114 aa0.37□□□□□ -2.35
LCD1YDR499W YLR053CQ12026 108 aa0.37□□□□□ -2.35
LCD1YDR499W RPL30P14120 105 aaKnown RBP0.37□□□□□ -2.35
LCD1YDR499W DLS1P40366 167 aa0.37□□□□□ -2.35
LCD1YDR499W NMA1Q06178 401 aaKnown RBP0.37□□□□□ -2.35
LCD1YDR499W ADE6P38972 1358 aaKnown RBP0.37□□□□□ -2.35
LCD1YDR499W SPA2P23201 1466 aaKnown RBP0.37□□□□□ -2.35
LCD1YDR499W HSP150P32478 413 aa0.36□□□□□ -2.35
LCD1YDR499W ATG8P38182 117 aaRIP-Chip data0.36□□□□□ -2.35not detected
LCD1YDR499W SLM6P38343 150 aa0.36□□□□□ -2.35
LCD1YDR499W APQ12P40532 138 aa0.36□□□□□ -2.35
LCD1YDR499W FIP1P45976 327 aa0.36□□□□□ -2.35
LCD1YDR499W MAK3Q03503 176 aa0.36□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 61.7 ms