RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC20	YDR498C	AFR1	P33304	620 aa		4.63	□□□□□ -1.67
SEC20	YDR498C	AVT5	P38176	459 aa		4.63	□□□□□ -1.67
SEC20	YDR498C	YAR068W	P39564	161 aa		4.63	□□□□□ -1.67
SEC20	YDR498C	BDH1	P39714	382 aa		4.63	□□□□□ -1.67
SEC20	YDR498C	GLE2	P40066	365 aa		4.63	□□□□□ -1.67
SEC20	YDR498C	YIL163C	P40448	117 aa		4.63	□□□□□ -1.67
SEC20	YDR498C	YIR020C	P40575	100 aa		4.63	□□□□□ -1.67
SEC20	YDR498C	YGL114W	P53134	725 aa		4.63	□□□□□ -1.67
SEC20	YDR498C	ADE8	P04161	214 aa		4.62	□□□□□ -1.67
SEC20	YDR498C	CUP1-1	P0CX80	61 aa		4.62	□□□□□ -1.67
SEC20	YDR498C	CUP1-2	P0CX81	61 aa		4.62	□□□□□ -1.67
SEC20	YDR498C	SEC59	P20048	519 aa		4.62	□□□□□ -1.67
SEC20	YDR498C	ALK2	P32789	676 aa	Predicted RBP	4.62	□□□□□ -1.67
SEC20	YDR498C	SRP14	P38985	146 aa		4.62	□□□□□ -1.67
SEC20	YDR498C	HUA1	P40325	198 aa		4.62	□□□□□ -1.67
SEC20	YDR498C	MOG1	P47123	218 aa		4.62	□□□□□ -1.67
SEC20	YDR498C	MIC27	P50945	234 aa		4.62	□□□□□ -1.67
SEC20	YDR498C	SBH2	P52871	88 aa		4.62	□□□□□ -1.67
SEC20	YDR498C	YGR151C	P53287	111 aa		4.62	□□□□□ -1.67
SEC20	YDR498C	DXO1	Q06349	442 aa		4.62	□□□□□ -1.67
SEC20	YDR498C	PML1	Q07930	204 aa	Predicted RBP	4.62	□□□□□ -1.67
SEC20	YDR498C	LDS2	Q08218	356 aa		4.62	□□□□□ -1.67
SEC20	YDR498C	RDL1	Q12305	139 aa	Known RBP	4.62	□□□□□ -1.67
SEC20	YDR498C	LAS17	Q12446	633 aa		4.62	□□□□□ -1.67
SEC20	YDR498C	NUM1	Q00402	2748 aa		4.61	□□□□□ -1.67
SEC20	YDR498C	RNA15	P25299	296 aa	Predicted RBP	4.61	□□□□□ -1.67
SEC20	YDR498C	VMA11	P32842	164 aa		4.61	□□□□□ -1.67
SEC20	YDR498C	LSM2	P38203	95 aa	Known RBP	4.61	□□□□□ -1.67
SEC20	YDR498C	CSH1	P38287	376 aa		4.61	□□□□□ -1.67
SEC20	YDR498C	IMD2	P38697	523 aa	Known RBP	4.61	□□□□□ -1.67
SEC20	YDR498C	ATG27	P46989	271 aa		4.61	□□□□□ -1.67
SEC20	YDR498C	MGA1	P53050	456 aa		4.61	□□□□□ -1.67
SEC20	YDR498C	LOA1	Q06508	300 aa		4.61	□□□□□ -1.67
SEC20	YDR498C	NDE2	Q07500	545 aa		4.61	□□□□□ -1.67
SEC20	YDR498C	IRC23	Q08416	157 aa		4.61	□□□□□ -1.67
SEC20	YDR498C	YOR352W	Q08816	343 aa		4.61	□□□□□ -1.67
SEC20	YDR498C	SNU23	Q12368	194 aa	Predicted RBP	4.61	□□□□□ -1.67
SEC20	YDR498C	GEP5	Q12393	293 aa		4.61	□□□□□ -1.67
SEC20	YDR498C	Q0297	Q9ZZV8	51 aa		4.61	□□□□□ -1.67
SEC20	YDR498C	PET494	P07390	489 aa	Predicted RBP	4.6	□□□□□ -1.67
SEC20	YDR498C	RPL43A	P0CX25	92 aa	Known RBP	4.6	□□□□□ -1.67
SEC20	YDR498C	RPL43B	P0CX26	92 aa		4.6	□□□□□ -1.67
SEC20	YDR498C	RPS2	P25443	254 aa	Known RBP	4.6	□□□□□ -1.67
SEC20	YDR498C	SRP21	P32342	167 aa		4.6	□□□□□ -1.67
SEC20	YDR498C	YNK1	P36010	153 aa	Known RBP	4.6	□□□□□ -1.67
SEC20	YDR498C	CDS1	P38221	457 aa		4.6	□□□□□ -1.67
SEC20	YDR498C	YPT31	P38555	223 aa	Known RBP	4.6	□□□□□ -1.67
SEC20	YDR498C	YGL185C	P53100	379 aa		4.6	□□□□□ -1.67
SEC20	YDR498C	YML122C	Q03207	126 aa		4.6	□□□□□ -1.67
SEC20	YDR498C	YMR166C	Q03829	368 aa		4.6	□□□□□ -1.67
SEC20	YDR498C	RAV2	Q03956	351 aa		4.6	□□□□□ -1.67
SEC20	YDR498C	ADH6	Q04894	360 aa	Known RBP	4.6	□□□□□ -1.67
SEC20	YDR498C	RXT3	Q07458	294 aa		4.6	□□□□□ -1.67
SEC20	YDR498C	YOP1	Q12402	180 aa		4.6	□□□□□ -1.67
SEC20	YDR498C	CDC7	P06243	507 aa		4.59	□□□□□ -1.67
SEC20	YDR498C	YPS1	P32329	569 aa		4.59	□□□□□ -1.67
SEC20	YDR498C	FPR2	P32472	135 aa		4.59	□□□□□ -1.67
SEC20	YDR498C	DUT1	P33317	147 aa		4.59	□□□□□ -1.67
SEC20	YDR498C	PHD1	P36093	366 aa		4.59	□□□□□ -1.67
SEC20	YDR498C	NOP16	P40007	231 aa	Known RBP	4.59	□□□□□ -1.67
SEC20	YDR498C	GPI2	P46961	280 aa		4.59	□□□□□ -1.67
SEC20	YDR498C	YJL163C	P46996	555 aa		4.59	□□□□□ -1.67
SEC20	YDR498C	CPD1	P53314	239 aa		4.59	□□□□□ -1.67
SEC20	YDR498C	SSU72	P53538	206 aa	Predicted RBP	4.59	□□□□□ -1.67
SEC20	YDR498C	OCA2	P53949	197 aa		4.59	□□□□□ -1.67
SEC20	YDR498C	ATC1	Q04005	294 aa		4.59	□□□□□ -1.67
SEC20	YDR498C	CSI2	Q08054	341 aa		4.59	□□□□□ -1.67
SEC20	YDR498C	FIT2	Q08906	153 aa		4.59	□□□□□ -1.67
SEC20	YDR498C	PAA1	Q12447	191 aa	Known RBP	4.59	□□□□□ -1.67
SEC20	YDR498C	RPS22A	P0C0W1	130 aa	Known RBP	4.58	□□□□□ -1.68
SEC20	YDR498C	YHR213W	P0CI67	198 aa		4.58	□□□□□ -1.68
SEC20	YDR498C	NHP6A	P11632	93 aa	Known RBP	4.58	□□□□□ -1.68
SEC20	YDR498C	RAD23	P32628	398 aa	Known RBP	4.58	□□□□□ -1.68
SEC20	YDR498C	DOG2	P38773	246 aa		4.58	□□□□□ -1.68
SEC20	YDR498C	DOG1	P38774	246 aa		4.58	□□□□□ -1.68
SEC20	YDR498C	PAU5	P43575	122 aa		4.58	□□□□□ -1.68
SEC20	YDR498C	YJL027C	P47063	138 aa	Predicted RBP	4.58	□□□□□ -1.68
SEC20	YDR498C	TIM10	P87108	93 aa		4.58	□□□□□ -1.68
SEC20	YDR498C	SEN15	Q04675	128 aa		4.58	□□□□□ -1.68
SEC20	YDR498C	ARR2	Q06597	130 aa		4.58	□□□□□ -1.68
SEC20	YDR498C	IRC25	Q07951	179 aa		4.58	□□□□□ -1.68
SEC20	YDR498C	ZEO1	Q08245	113 aa		4.58	□□□□□ -1.68
SEC20	YDR498C	AYT1	Q12226	474 aa		4.58	□□□□□ -1.68
SEC20	YDR498C	PAU19	P0CE85	124 aa		4.57	□□□□□ -1.68
SEC20	YDR498C	PAU21	P0CE86	164 aa		4.57	□□□□□ -1.68
SEC20	YDR498C	PAU22	P0CE87	164 aa		4.57	□□□□□ -1.68
SEC20	YDR498C	PAU3	P25610	124 aa		4.57	□□□□□ -1.68
SEC20	YDR498C	YBL071C	P38185	102 aa		4.57	□□□□□ -1.68
SEC20	YDR498C	GPP2	P40106	250 aa	Known RBP	4.57	□□□□□ -1.68
SEC20	YDR498C	SAS2	P40963	338 aa		4.57	□□□□□ -1.68
SEC20	YDR498C	IMP2	P46972	177 aa		4.57	□□□□□ -1.68
SEC20	YDR498C	TOM7	P53507	60 aa		4.57	□□□□□ -1.68
SEC20	YDR498C	HST4	P53688	370 aa		4.57	□□□□□ -1.68
SEC20	YDR498C	DAD3	P69850	94 aa		4.57	□□□□□ -1.68
SEC20	YDR498C	ARL3	Q02804	198 aa		4.57	□□□□□ -1.68
SEC20	YDR498C	YMR317W	Q04893	1140 aa		4.57	□□□□□ -1.68
SEC20	YDR498C	NAT3	Q06504	195 aa		4.57	□□□□□ -1.68
SEC20	YDR498C	PBP4	Q07362	185 aa	Known RBP	4.57	□□□□□ -1.68
SEC20	YDR498C	JID1	Q12350	301 aa		4.57	□□□□□ -1.68
SEC20	YDR498C	MRPL28	P36527	147 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms