RNA–Protein interactions for RNA: YDR317W

HIM1, Transcript of Protein of unknown function involved in DNA repair, yeast

Gene HIM1, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIM1	YDR317W	RPL9B	P51401	191 aa	Known RBP	2.77	□□□□□ -1.97
HIM1	YDR317W	TIM11	P81449	96 aa	Predicted RBP	2.77	□□□□□ -1.97
HIM1	YDR317W	MIX17	Q03667	156 aa		2.77	□□□□□ -1.97
HIM1	YDR317W	CAB5	Q03941	241 aa		2.77	□□□□□ -1.97
HIM1	YDR317W	YOR292C	Q08743	309 aa		2.77	□□□□□ -1.97
HIM1	YDR317W	SCP1	Q08873	200 aa		2.77	□□□□□ -1.97
HIM1	YDR317W	FCY1	Q12178	158 aa		2.77	□□□□□ -1.97
HIM1	YDR317W	ATO3	Q12359	275 aa		2.77	□□□□□ -1.97
HIM1	YDR317W	RDI1	Q12434	202 aa		2.77	□□□□□ -1.97
HIM1	YDR317W	YPR108W-A	Q3E7B3	70 aa		2.77	□□□□□ -1.97
HIM1	YDR317W	PET20	Q99373	253 aa		2.77	□□□□□ -1.97
HIM1	YDR317W	SEN2	P16658	377 aa		2.76	□□□□□ -1.97
HIM1	YDR317W	CPT1	P17898	393 aa		2.76	□□□□□ -1.97
HIM1	YDR317W	YMR31	P19955	123 aa		2.76	□□□□□ -1.97
HIM1	YDR317W	HYM1	P32464	399 aa		2.76	□□□□□ -1.97
HIM1	YDR317W	AGA2	P32781	87 aa		2.76	□□□□□ -1.97
HIM1	YDR317W	CUE1	P38428	203 aa		2.76	□□□□□ -1.97
HIM1	YDR317W	YJL118W	P47022	219 aa		2.76	□□□□□ -1.97
HIM1	YDR317W	CWC23	P52868	283 aa	Predicted RBP	2.76	□□□□□ -1.97
HIM1	YDR317W	LSM7	P53905	115 aa	Known RBP	2.76	□□□□□ -1.97
HIM1	YDR317W	VBA1	Q04301	562 aa		2.76	□□□□□ -1.97
HIM1	YDR317W	SPG4	Q04438	115 aa		2.76	□□□□□ -1.97
HIM1	YDR317W	HRD1	Q08109	551 aa		2.76	□□□□□ -1.97
HIM1	YDR317W	YOL118C	Q08259	102 aa		2.76	□□□□□ -1.97
HIM1	YDR317W	YNG1	Q08465	219 aa		2.76	□□□□□ -1.97
HIM1	YDR317W	ROX3	P25046	220 aa		2.75	□□□□□ -1.97
HIM1	YDR317W	PRS4	P38063	326 aa	Predicted RBP	2.75	□□□□□ -1.97
HIM1	YDR317W	POP8	P38208	133 aa		2.75	□□□□□ -1.97
HIM1	YDR317W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.75	□□□□□ -1.97	not detected
HIM1	YDR317W	POP2	P39008	433 aa		2.75	□□□□□ -1.97
HIM1	YDR317W	RFC2	P40348	353 aa		2.75	□□□□□ -1.97
HIM1	YDR317W	YMR244W	Q04018	355 aa		2.75	□□□□□ -1.97
HIM1	YDR317W	PAM18	Q07914	168 aa		2.75	□□□□□ -1.97
HIM1	YDR317W	ATG31	Q12421	196 aa		2.75	□□□□□ -1.97
HIM1	YDR317W	PRM4	Q12498	284 aa		2.75	□□□□□ -1.97
HIM1	YDR317W	HUG1	Q6Q5K6	68 aa		2.75	□□□□□ -1.97
HIM1	YDR317W	HTB1	P02293	131 aa	Known RBP	2.74	□□□□□ -1.97
HIM1	YDR317W	CUP2	P15315	225 aa		2.74	□□□□□ -1.97
HIM1	YDR317W	COX10	P21592	462 aa		2.74	□□□□□ -1.97
HIM1	YDR317W	SPT14	P32363	452 aa		2.74	□□□□□ -1.97
HIM1	YDR317W	SPS18	P32572	300 aa		2.74	□□□□□ -1.97
HIM1	YDR317W	RTC3	P38804	111 aa	Predicted RBP	2.74	□□□□□ -1.97
HIM1	YDR317W	VPS55	P47111	140 aa		2.74	□□□□□ -1.97
HIM1	YDR317W	TPN1	P53099	579 aa		2.74	□□□□□ -1.97
HIM1	YDR317W	HOR7	Q05827	59 aa		2.74	□□□□□ -1.97
HIM1	YDR317W	YOR385W	Q08909	290 aa		2.74	□□□□□ -1.97
HIM1	YDR317W	SPS2	P08459	502 aa		2.73	□□□□□ -1.97
HIM1	YDR317W	INO2	P26798	304 aa		2.73	□□□□□ -1.97
HIM1	YDR317W	MIG1	P27705	504 aa		2.73	□□□□□ -1.97
HIM1	YDR317W	ACB1	P31787	87 aa		2.73	□□□□□ -1.97
HIM1	YDR317W	SUA5	P32579	426 aa		2.73	□□□□□ -1.97
HIM1	YDR317W	MRPL3	P36516	390 aa		2.73	□□□□□ -1.97
HIM1	YDR317W	ERV15	P38312	142 aa		2.73	□□□□□ -1.97
HIM1	YDR317W	AGE2	P40529	298 aa		2.73	□□□□□ -1.97
HIM1	YDR317W	YJR012C	P47087	207 aa		2.73	□□□□□ -1.97
HIM1	YDR317W	SSU72	P53538	206 aa	Predicted RBP	2.73	□□□□□ -1.97
HIM1	YDR317W	SMD1	Q02260	146 aa	Predicted RBP	2.73	□□□□□ -1.97
HIM1	YDR317W	THI74	Q04083	370 aa		2.73	□□□□□ -1.97
HIM1	YDR317W	PEX10	Q05568	337 aa		2.73	□□□□□ -1.97
HIM1	YDR317W	SYM1	Q06563	197 aa		2.73	□□□□□ -1.97
HIM1	YDR317W	PRM3	Q08931	133 aa		2.73	□□□□□ -1.97
HIM1	YDR317W	BOL1	Q3E793	110 aa		2.73	□□□□□ -1.97
HIM1	YDR317W	QCR2	P07257	368 aa		2.72	□□□□□ -1.97
HIM1	YDR317W	MRP17	P28778	131 aa		2.72	□□□□□ -1.97
HIM1	YDR317W	MRPL38	P35996	138 aa	Predicted RBP	2.72	□□□□□ -1.97
HIM1	YDR317W	YBR242W	P38331	238 aa		2.72	□□□□□ -1.97
HIM1	YDR317W	RPA43	P46669	326 aa		2.72	□□□□□ -1.97
HIM1	YDR317W	ERG25	P53045	309 aa		2.72	□□□□□ -1.97
HIM1	YDR317W	YGL118C	P53132	145 aa		2.72	□□□□□ -1.97
HIM1	YDR317W	TOS8	P53147	276 aa		2.72	□□□□□ -1.97
HIM1	YDR317W	CAX4	P53223	239 aa		2.72	□□□□□ -1.97
HIM1	YDR317W	CAB4	P53332	305 aa		2.72	□□□□□ -1.97
HIM1	YDR317W	MRPL23	Q12487	163 aa	Predicted RBP	2.72	□□□□□ -1.97
HIM1	YDR317W	TDH1	P00360	332 aa	Known RBP	2.71	□□□□□ -1.98
HIM1	YDR317W	COX2	P00410	251 aa		2.71	□□□□□ -1.98
HIM1	YDR317W	GRX2	P17695	143 aa	Known RBP	2.71	□□□□□ -1.98
HIM1	YDR317W	YPT31	P38555	223 aa	Known RBP	2.71	□□□□□ -1.98
HIM1	YDR317W	COX15	P40086	486 aa		2.71	□□□□□ -1.98
HIM1	YDR317W	RPL13B	P40212	199 aa	Known RBP	2.71	□□□□□ -1.98
HIM1	YDR317W	SDS23	P53172	527 aa		2.71	□□□□□ -1.98
HIM1	YDR317W	DIA1	P54005	336 aa		2.71	□□□□□ -1.98
HIM1	YDR317W	VPS28	Q02767	242 aa		2.71	□□□□□ -1.98
HIM1	YDR317W	YCT1	Q12235	531 aa		2.71	□□□□□ -1.98
HIM1	YDR317W	RPL13A	Q12690	199 aa	Predicted RBP	2.71	□□□□□ -1.98
HIM1	YDR317W	DFM1	Q12743	341 aa	Known RBP	2.71	□□□□□ -1.98
HIM1	YDR317W	YGL258W-A	Q3E740	77 aa		2.71	□□□□□ -1.98
HIM1	YDR317W	YHR212W-A	P0CX91	67 aa		2.7	□□□□□ -1.98
HIM1	YDR317W	NHP6B	P11633	99 aa	Known RBP	2.7	□□□□□ -1.98
HIM1	YDR317W	URA5	P13298	226 aa	Known RBP	2.7	□□□□□ -1.98
HIM1	YDR317W	YCR016W	P25617	290 aa	Known RBP	2.7	□□□□□ -1.98
HIM1	YDR317W	YKR045C	P36138	183 aa		2.7	□□□□□ -1.98
HIM1	YDR317W	YKE4	P40544	346 aa		2.7	□□□□□ -1.98
HIM1	YDR317W	LST8	P41318	303 aa		2.7	□□□□□ -1.98
HIM1	YDR317W	FIP1	P45976	327 aa		2.7	□□□□□ -1.98
HIM1	YDR317W	ARP3	P47117	449 aa	Known RBP	2.7	□□□□□ -1.98
HIM1	YDR317W	NIF3	P53081	288 aa		2.7	□□□□□ -1.98
HIM1	YDR317W	ARO8	P53090	500 aa	Known RBP	2.7	□□□□□ -1.98
HIM1	YDR317W	CPD1	P53314	239 aa		2.7	□□□□□ -1.98
HIM1	YDR317W	ECM19	Q06011	112 aa		2.7	□□□□□ -1.98
HIM1	YDR317W	PBP4	Q07362	185 aa	Known RBP	2.7	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 96.8 ms