RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W OCA2P53949 197 aa1.36□□□□□ -2.19
CFT1YDR301W YMR090WQ04304 227 aaKnown RBP1.36□□□□□ -2.19
CFT1YDR301W IRC25Q07951 179 aa1.36□□□□□ -2.19
CFT1YDR301W FEX1Q08913 375 aa1.36□□□□□ -2.19
CFT1YDR301W LAS17Q12446 633 aa1.36□□□□□ -2.19
CFT1YDR301W VMA9Q3E7B6 73 aa1.36□□□□□ -2.19
CFT1YDR301W SEC59P20048 519 aa1.36□□□□□ -2.19
CFT1YDR301W ZRC1P20107 442 aa1.36□□□□□ -2.19
CFT1YDR301W VMA7P39111 118 aa1.36□□□□□ -2.19
CFT1YDR301W YJL027CP47063 138 aaPredicted RBP1.36□□□□□ -2.19
CFT1YDR301W COX16P47081 118 aa1.36□□□□□ -2.19
CFT1YDR301W YGL117WP53133 265 aa1.36□□□□□ -2.19
CFT1YDR301W TMA23Q03525 211 aa1.36□□□□□ -2.19
CFT1YDR301W POS5Q06892 414 aa1.36□□□□□ -2.19
CFT1YDR301W MCH1Q07376 486 aa1.36□□□□□ -2.19
CFT1YDR301W FEX2Q08991 375 aa1.36□□□□□ -2.19
CFT1YDR301W TOR1P35169 2470 aa1.36□□□□□ -2.19
CFT1YDR301W PIS1P06197 220 aaKnown RBP1.35□□□□□ -2.19
CFT1YDR301W DDI2P0CH63 225 aa1.35□□□□□ -2.19
CFT1YDR301W DDI3P0CH64 225 aa1.35□□□□□ -2.19
CFT1YDR301W YBL059WP34224 193 aa1.35□□□□□ -2.19
CFT1YDR301W NSA2P40078 261 aaKnown RBP1.35□□□□□ -2.19
CFT1YDR301W IMP2P46972 177 aa1.35□□□□□ -2.19
CFT1YDR301W PKP2P53170 491 aa1.35□□□□□ -2.19
CFT1YDR301W TIM11P81449 96 aaPredicted RBP1.35□□□□□ -2.19
CFT1YDR301W YDR415CQ04033 374 aaPredicted RBP1.35□□□□□ -2.19
CFT1YDR301W SPG4Q04438 115 aa1.35□□□□□ -2.19
CFT1YDR301W YDR114CQ04597 100 aa1.35□□□□□ -2.19
CFT1YDR301W USV1Q12132 391 aa1.35□□□□□ -2.19
CFT1YDR301W UTP23Q12339 254 aaKnown RBP1.35□□□□□ -2.19
CFT1YDR301W MRPL23Q12487 163 aaPredicted RBP1.35□□□□□ -2.19
CFT1YDR301W COX2P00410 251 aa1.35□□□□□ -2.19
CFT1YDR301W HTB1P02293 131 aaKnown RBP1.35□□□□□ -2.19
CFT1YDR301W RTS2P40962 232 aa1.35□□□□□ -2.19
CFT1YDR301W YGL185CP53100 379 aa1.35□□□□□ -2.19
CFT1YDR301W HST4P53688 370 aa1.35□□□□□ -2.19
CFT1YDR301W HOR7Q05827 59 aa1.35□□□□□ -2.19
CFT1YDR301W RRG8Q06109 277 aa1.35□□□□□ -2.19
CFT1YDR301W ATG5Q12380 294 aa1.35□□□□□ -2.19
CFT1YDR301W YLR146W-AQ2V2P1 62 aa1.35□□□□□ -2.19
CFT1YDR301W CYC3P06182 269 aa1.35□□□□□ -2.19
CFT1YDR301W TIR1P10863 254 aa1.35□□□□□ -2.19
CFT1YDR301W NOP1P15646 327 aaKnown RBP1.35□□□□□ -2.19
CFT1YDR301W ELF1P36053 145 aa1.35□□□□□ -2.19
CFT1YDR301W YKL075CP36083 450 aa1.35□□□□□ -2.19
CFT1YDR301W MRPS9P38120 278 aa1.35□□□□□ -2.19
CFT1YDR301W YPT10P38146 199 aa1.35□□□□□ -2.19
CFT1YDR301W CYB5P40312 120 aa1.35□□□□□ -2.19
CFT1YDR301W CDC40P40968 455 aaPredicted RBP1.35□□□□□ -2.19
CFT1YDR301W GPI2P46961 280 aa1.35□□□□□ -2.19
CFT1YDR301W MOG1P47123 218 aa1.35□□□□□ -2.19
CFT1YDR301W YJR111CP47148 283 aaKnown RBP1.35□□□□□ -2.19
CFT1YDR301W CRH1P53301 507 aa1.35□□□□□ -2.19
CFT1YDR301W PAU4P53427 120 aa1.35□□□□□ -2.19
CFT1YDR301W YNL234WP53857 426 aa1.35□□□□□ -2.19
CFT1YDR301W MRX11Q03079 207 aa1.35□□□□□ -2.19
CFT1YDR301W YHP1Q04116 353 aa1.35□□□□□ -2.19
CFT1YDR301W SDH7Q04401 133 aa1.35□□□□□ -2.19
CFT1YDR301W AVO2Q04749 426 aa1.35□□□□□ -2.19
CFT1YDR301W CTR3Q06686 241 aa1.35□□□□□ -2.19
CFT1YDR301W RRT7Q07829 113 aa1.35□□□□□ -2.19
CFT1YDR301W TIM18Q08749 192 aa1.35□□□□□ -2.19
CFT1YDR301W MRS1P07266 363 aa1.35□□□□□ -2.19
CFT1YDR301W YHR213WP0CI67 198 aa1.35□□□□□ -2.19
CFT1YDR301W CNB1P25296 175 aa1.35□□□□□ -2.19
CFT1YDR301W TRS20P38334 175 aa1.35□□□□□ -2.19
CFT1YDR301W EMC5P40540 141 aa1.35□□□□□ -2.19
CFT1YDR301W DID2P69771 204 aa1.35□□□□□ -2.19
CFT1YDR301W ATO3Q12359 275 aa1.35□□□□□ -2.19
CFT1YDR301W YGL194C-AQ2V2P6 80 aa1.35□□□□□ -2.19
CFT1YDR301W CDC7P06243 507 aa1.34□□□□□ -2.19
CFT1YDR301W YCL042WP25572 119 aa1.34□□□□□ -2.19
CFT1YDR301W UPS2P35200 230 aa1.34□□□□□ -2.19
CFT1YDR301W VMA22P38784 181 aa1.34□□□□□ -2.19
CFT1YDR301W MBB1P39534 108 aa1.34□□□□□ -2.19
CFT1YDR301W PAU15P40585 124 aa1.34□□□□□ -2.19
CFT1YDR301W VPS55P47111 140 aa1.34□□□□□ -2.19
CFT1YDR301W MIC27P50945 234 aa1.34□□□□□ -2.19
CFT1YDR301W ATP19P81451 68 aa1.34□□□□□ -2.19
CFT1YDR301W TSA2Q04120 196 aa1.34□□□□□ -2.19
CFT1YDR301W PRM3Q08931 133 aa1.34□□□□□ -2.19
CFT1YDR301W MRPL20P22354 195 aaPredicted RBP1.34□□□□□ -2.2
CFT1YDR301W MSK1P32048 576 aa1.34□□□□□ -2.2
CFT1YDR301W SRB6P32570 121 aa1.34□□□□□ -2.2
CFT1YDR301W YKL102CP34249 101 aa1.34□□□□□ -2.2
CFT1YDR301W GLE2P40066 365 aa1.34□□□□□ -2.2
CFT1YDR301W TIM21P53220 239 aa1.34□□□□□ -2.2
CFT1YDR301W DYN2Q02647 92 aa1.34□□□□□ -2.2
CFT1YDR301W SHH3Q04487 196 aa1.34□□□□□ -2.2
CFT1YDR301W YMR253CQ04835 414 aa1.34□□□□□ -2.2
CFT1YDR301W CCW12Q12127 133 aa1.34□□□□□ -2.2
CFT1YDR301W YOP1Q12402 180 aa1.34□□□□□ -2.2
CFT1YDR301W CCW14O13547 238 aa1.34□□□□□ -2.2
CFT1YDR301W RPS25BP0C0T4 108 aaKnown RBP1.34□□□□□ -2.2
CFT1YDR301W TIP1P27654 210 aaPredicted RBP1.34□□□□□ -2.2
CFT1YDR301W RRT1P38192 103 aa1.34□□□□□ -2.2
CFT1YDR301W YHR173CP38864 112 aa1.34□□□□□ -2.2
CFT1YDR301W HSP10P38910 106 aa1.34□□□□□ -2.2
CFT1YDR301W POR2P40478 281 aa1.34□□□□□ -2.2
CFT1YDR301W YJR056CP47115 236 aa1.34□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms