RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W TRM3Q07527 1436 aa0.37□□□□□ -2.35
BFR2YDR299W RIF1P29539 1916 aa0.36□□□□□ -2.35
BFR2YDR299W YLR422WQ06409 1932 aa0.36□□□□□ -2.35
BFR2YDR299W SEC72P39742 193 aaKnown RBP0.36□□□□□ -2.35
BFR2YDR299W YEL073CP39974 107 aa0.36□□□□□ -2.35
BFR2YDR299W TTI2P47168 421 aa0.36□□□□□ -2.35
BFR2YDR299W SBH1P52870 82 aa0.36□□□□□ -2.35
BFR2YDR299W DIG2Q03373 323 aaKnown RBP0.36□□□□□ -2.35
BFR2YDR299W YPD1Q07688 167 aa0.36□□□□□ -2.35
BFR2YDR299W YOR072WQ08486 104 aa0.36□□□□□ -2.35
BFR2YDR299W YDL157CQ12082 118 aa0.36□□□□□ -2.35
BFR2YDR299W YLR050CQ12155 161 aaKnown RBP0.36□□□□□ -2.35
BFR2YDR299W KIN28P06242 306 aa0.35□□□□□ -2.35
BFR2YDR299W CMD1P06787 147 aaKnown RBP0.35□□□□□ -2.35
BFR2YDR299W SPS2P08459 502 aa0.35□□□□□ -2.35
BFR2YDR299W RAD51P25454 400 aa0.35□□□□□ -2.35
BFR2YDR299W ECM31P38122 312 aa0.35□□□□□ -2.35
BFR2YDR299W YHL037CP38733 133 aa0.35□□□□□ -2.35
BFR2YDR299W YNL200CP40165 246 aaKnown RBP0.35□□□□□ -2.35
BFR2YDR299W POG1P40473 351 aa0.35□□□□□ -2.35
BFR2YDR299W VMA10P48836 114 aaKnown RBP0.35□□□□□ -2.35
BFR2YDR299W GEP7P53171 287 aa0.35□□□□□ -2.35
BFR2YDR299W ATP19P81451 68 aa0.35□□□□□ -2.35
BFR2YDR299W GAL83Q04739 417 aa0.35□□□□□ -2.35
BFR2YDR299W GRX8Q05926 109 aa0.35□□□□□ -2.35
BFR2YDR299W VAM10Q08474 114 aa0.35□□□□□ -2.35
BFR2YDR299W UIP4Q08926 304 aa0.35□□□□□ -2.35
BFR2YDR299W PRM3Q08931 133 aa0.35□□□□□ -2.35
BFR2YDR299W PST2Q12335 198 aaKnown RBP0.35□□□□□ -2.35
BFR2YDR299W PEX11Q12462 236 aa0.35□□□□□ -2.35
BFR2YDR299W CLG1P35190 452 aa0.35□□□□□ -2.35
BFR2YDR299W SHB17P36136 271 aaKnown RBP0.35□□□□□ -2.35
BFR2YDR299W CIN5P40917 295 aa0.35□□□□□ -2.35
BFR2YDR299W GLC8P41818 229 aa0.35□□□□□ -2.35
BFR2YDR299W YFL051CP43552 160 aa0.35□□□□□ -2.35
BFR2YDR299W LIP1Q03579 150 aa0.35□□□□□ -2.35
BFR2YDR299W SYM1Q06563 197 aa0.35□□□□□ -2.35
BFR2YDR299W ATG10Q07879 167 aa0.35□□□□□ -2.35
BFR2YDR299W YHR213W-BQ8TGK1 99 aa0.35□□□□□ -2.35
BFR2YDR299W DUR1,2P32528 1835 aaKnown RBP0.34□□□□□ -2.36
BFR2YDR299W HYP2P23301 157 aaKnown RBP0.34□□□□□ -2.36
BFR2YDR299W FYV4P38783 130 aaPredicted RBP0.34□□□□□ -2.36
BFR2YDR299W SNO1Q03144 224 aa0.34□□□□□ -2.36
BFR2YDR299W YDR476CQ03362 224 aa0.34□□□□□ -2.36
BFR2YDR299W MAK3Q03503 176 aa0.34□□□□□ -2.36
BFR2YDR299W RIM9Q04734 239 aa0.34□□□□□ -2.36
BFR2YDR299W ATG38Q05789 226 aaKnown RBP0.34□□□□□ -2.36
BFR2YDR299W TAF2P23255 1407 aa0.33□□□□□ -2.36
BFR2YDR299W YGL041W-AP0C5N3 154 aa0.33□□□□□ -2.36
BFR2YDR299W INO4P13902 151 aa0.33□□□□□ -2.36
BFR2YDR299W PTC1P35182 281 aa0.33□□□□□ -2.36
BFR2YDR299W FES1P38260 290 aa0.33□□□□□ -2.36
BFR2YDR299W YPT31P38555 223 aaKnown RBP0.33□□□□□ -2.36
BFR2YDR299W YNR064CP53750 290 aa0.33□□□□□ -2.36
BFR2YDR299W YLR053CQ12026 108 aa0.33□□□□□ -2.36
BFR2YDR299W FCY1Q12178 158 aa0.33□□□□□ -2.36
BFR2YDR299W HAP2P06774 265 aa0.32□□□□□ -2.36
BFR2YDR299W RPS22AP0C0W1 130 aaKnown RBP0.32□□□□□ -2.36
BFR2YDR299W PBI2P0CT04 75 aaKnown RBP0.32□□□□□ -2.36
BFR2YDR299W YKR041WP36134 250 aa0.32□□□□□ -2.36
BFR2YDR299W SRP14P38985 146 aa0.32□□□□□ -2.36
BFR2YDR299W DLS1P40366 167 aa0.32□□□□□ -2.36
BFR2YDR299W CCC1P47818 322 aa0.32□□□□□ -2.36
BFR2YDR299W SOL1P50278 321 aa0.32□□□□□ -2.36
BFR2YDR299W IRC21Q04772 201 aa0.32□□□□□ -2.36
BFR2YDR299W NMA1Q06178 401 aaKnown RBP0.32□□□□□ -2.36
BFR2YDR299W RPS22BQ3E7Y3 130 aaKnown RBP0.32□□□□□ -2.36
BFR2YDR299W KTI11Q3E840 82 aa0.32□□□□□ -2.36
BFR2YDR299W ADE6P38972 1358 aaKnown RBP0.32□□□□□ -2.36
BFR2YDR299W PRP8P33334 2413 aaKnown RBP0.32□□□□□ -2.36
BFR2YDR299W SAC3P46674 1301 aa0.32□□□□□ -2.36
BFR2YDR299W ATP5P09457 212 aa0.31□□□□□ -2.36
BFR2YDR299W YCR001WP25347 104 aa0.31□□□□□ -2.36
BFR2YDR299W SPT14P32363 452 aa0.31□□□□□ -2.36
BFR2YDR299W YEL028WP39989 153 aa0.31□□□□□ -2.36
BFR2YDR299W YDR102CQ03864 110 aa0.31□□□□□ -2.36
BFR2YDR299W THI74Q04083 370 aa0.31□□□□□ -2.36
BFR2YDR299W YPR114WQ06107 315 aa0.31□□□□□ -2.36
BFR2YDR299W CMC2Q3E7A4 109 aa0.31□□□□□ -2.36
BFR2YDR299W SPA2P23201 1466 aaKnown RBP0.31□□□□□ -2.36
BFR2YDR299W HFA1P32874 2273 aa0.31□□□□□ -2.36
BFR2YDR299W YOL013W-AP0C272 63 aaPredicted RBP0.31□□□□□ -2.36
BFR2YDR299W RPL35AP0CX84 120 aaKnown RBP0.31□□□□□ -2.36
BFR2YDR299W RPL35BP0CX85 120 aaKnown RBP0.31□□□□□ -2.36
BFR2YDR299W SRL3P36167 246 aa0.31□□□□□ -2.36
BFR2YDR299W ATG8P38182 117 aaRIP-Chip data0.31□□□□□ -2.36not detected
BFR2YDR299W YBR027CP38220 110 aa0.31□□□□□ -2.36
BFR2YDR299W HTD2P38790 280 aaKnown RBP0.31□□□□□ -2.36
BFR2YDR299W YEL014CP39999 101 aa0.31□□□□□ -2.36
BFR2YDR299W YJL009WP47078 108 aa0.31□□□□□ -2.36
BFR2YDR299W YGL101WP53144 215 aa0.31□□□□□ -2.36
BFR2YDR299W LSM3P57743 89 aaKnown RBP0.31□□□□□ -2.36
BFR2YDR299W GIM5Q04493 163 aa0.31□□□□□ -2.36
BFR2YDR299W RRT7Q07829 113 aa0.31□□□□□ -2.36
BFR2YDR299W COA6Q3E846 104 aa0.31□□□□□ -2.36
BFR2YDR299W RIB3Q99258 208 aa0.31□□□□□ -2.36
BFR2YDR299W QCR2P07257 368 aa0.3□□□□□ -2.36
BFR2YDR299W FUN14P18411 198 aa0.3□□□□□ -2.36
BFR2YDR299W CSH1P38287 376 aa0.3□□□□□ -2.36
BFR2YDR299W YHR140WP38842 239 aa0.3□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms