RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	FIG1	P38224	298 aa		0.5	□□□□□ -2.33
SWF1	YDR126W	CCS1	P40202	249 aa	Known RBP	0.5	□□□□□ -2.33
SWF1	YDR126W	YGR269W	P40326	108 aa		0.5	□□□□□ -2.33
SWF1	YDR126W	APQ12	P40532	138 aa		0.5	□□□□□ -2.33
SWF1	YDR126W	YFH7	P43591	353 aa		0.5	□□□□□ -2.33
SWF1	YDR126W	YGL101W	P53144	215 aa		0.5	□□□□□ -2.33
SWF1	YDR126W	GEP7	P53171	287 aa		0.5	□□□□□ -2.33
SWF1	YDR126W	MPC3	P53311	146 aa		0.5	□□□□□ -2.33
SWF1	YDR126W	YIP3	P53633	176 aa		0.5	□□□□□ -2.33
SWF1	YDR126W	LSM3	P57743	89 aa	Known RBP	0.5	□□□□□ -2.33
SWF1	YDR126W	LIP1	Q03579	150 aa		0.5	□□□□□ -2.33
SWF1	YDR126W	YHP1	Q04116	353 aa		0.5	□□□□□ -2.33
SWF1	YDR126W	RRT7	Q07829	113 aa		0.5	□□□□□ -2.33
SWF1	YDR126W	ATG10	Q07879	167 aa		0.5	□□□□□ -2.33
SWF1	YDR126W	FYV12	Q08559	129 aa		0.5	□□□□□ -2.33
SWF1	YDR126W	ATG41	Q12048	136 aa		0.5	□□□□□ -2.33
SWF1	YDR126W	YDL157C	Q12082	118 aa		0.5	□□□□□ -2.33
SWF1	YDR126W	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.5	□□□□□ -2.33
SWF1	YDR126W	YOR381W-A	Q3E804	55 aa		0.5	□□□□□ -2.33
SWF1	YDR126W	RPS25B	P0C0T4	108 aa	Known RBP	0.49	□□□□□ -2.33
SWF1	YDR126W	YGL041W-A	P0C5N3	154 aa		0.49	□□□□□ -2.33
SWF1	YDR126W	UBI4	P0CG63	381 aa	Known RBP	0.49	□□□□□ -2.33
SWF1	YDR126W	APA2	P22108	325 aa		0.49	□□□□□ -2.33
SWF1	YDR126W	DER1	P38307	211 aa		0.49	□□□□□ -2.33
SWF1	YDR126W	YHL018W	P38744	120 aa	Predicted RBP	0.49	□□□□□ -2.33
SWF1	YDR126W	YAP3	P38749	330 aa		0.49	□□□□□ -2.33
SWF1	YDR126W	VMA22	P38784	181 aa		0.49	□□□□□ -2.33
SWF1	YDR126W	YNL200C	P40165	246 aa	Known RBP	0.49	□□□□□ -2.33
SWF1	YDR126W	YIL102C	P40488	101 aa		0.49	□□□□□ -2.33
SWF1	YDR126W	CIN5	P40917	295 aa		0.49	□□□□□ -2.33
SWF1	YDR126W	NSE4	P43124	402 aa		0.49	□□□□□ -2.33
SWF1	YDR126W	YFL065C	P43539	102 aa		0.49	□□□□□ -2.33
SWF1	YDR126W	MOG1	P47123	218 aa		0.49	□□□□□ -2.33
SWF1	YDR126W	CCC1	P47818	322 aa		0.49	□□□□□ -2.33
SWF1	YDR126W	YGL235W	P53071	178 aa		0.49	□□□□□ -2.33
SWF1	YDR126W	YDR366C	P87287	132 aa		0.49	□□□□□ -2.33
SWF1	YDR126W	DIG2	Q03373	323 aa	Known RBP	0.49	□□□□□ -2.33
SWF1	YDR126W	THI74	Q04083	370 aa		0.49	□□□□□ -2.33
SWF1	YDR126W	GAL83	Q04739	417 aa		0.49	□□□□□ -2.33
SWF1	YDR126W	VAM10	Q08474	114 aa		0.49	□□□□□ -2.33
SWF1	YDR126W	YLR046C	Q12253	270 aa		0.49	□□□□□ -2.33
SWF1	YDR126W	RPS25A	Q3E792	108 aa	Predicted RBP	0.49	□□□□□ -2.33
SWF1	YDR126W	ACC1	Q00955	2233 aa	Known RBP	0.49	□□□□□ -2.33
SWF1	YDR126W	RPL30	P14120	105 aa	Known RBP	0.48	□□□□□ -2.33
SWF1	YDR126W	HYP2	P23301	157 aa	Known RBP	0.48	□□□□□ -2.33
SWF1	YDR126W	PEX34	P25584	144 aa		0.48	□□□□□ -2.33
SWF1	YDR126W	MRPL15	P36523	253 aa		0.48	□□□□□ -2.33
SWF1	YDR126W	YBR242W	P38331	238 aa		0.48	□□□□□ -2.33
SWF1	YDR126W	YPT31	P38555	223 aa	Known RBP	0.48	□□□□□ -2.33
SWF1	YDR126W	FYV4	P38783	130 aa	Predicted RBP	0.48	□□□□□ -2.33
SWF1	YDR126W	HTD2	P38790	280 aa	Known RBP	0.48	□□□□□ -2.33
SWF1	YDR126W	DCV1	P43595	202 aa		0.48	□□□□□ -2.33
SWF1	YDR126W	YJR015W	P47090	510 aa		0.48	□□□□□ -2.33
SWF1	YDR126W	RBL2	P48606	106 aa	Known RBP	0.48	□□□□□ -2.33
SWF1	YDR126W	SPG1	P50088	95 aa		0.48	□□□□□ -2.33
SWF1	YDR126W	YGL230C	P53074	147 aa		0.48	□□□□□ -2.33
SWF1	YDR126W	YNR064C	P53750	290 aa		0.48	□□□□□ -2.33
SWF1	YDR126W	YDC1	Q02896	317 aa		0.48	□□□□□ -2.33
SWF1	YDR126W	YDR102C	Q03864	110 aa		0.48	□□□□□ -2.33
SWF1	YDR126W	RIM9	Q04734	239 aa		0.48	□□□□□ -2.33
SWF1	YDR126W	YMR252C	Q04814	134 aa		0.48	□□□□□ -2.33
SWF1	YDR126W	RNH202	Q05635	350 aa		0.48	□□□□□ -2.33
SWF1	YDR126W	UPS1	Q05776	175 aa		0.48	□□□□□ -2.33
SWF1	YDR126W	NMA1	Q06178	401 aa	Known RBP	0.48	□□□□□ -2.33
SWF1	YDR126W	YOR072W	Q08486	104 aa		0.48	□□□□□ -2.33
SWF1	YDR126W	ATP14	Q12349	124 aa		0.48	□□□□□ -2.33
SWF1	YDR126W	FAS1	P07149	2051 aa	Known RBP	0.47	□□□□□ -2.33
SWF1	YDR126W	ADE6	P38972	1358 aa	Known RBP	0.47	□□□□□ -2.33
SWF1	YDR126W	KIN28	P06242	306 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	INO4	P13902	151 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	SEN2	P16658	377 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	YKR070W	P36151	352 aa	Known RBP	0.47	□□□□□ -2.33
SWF1	YDR126W	SRL3	P36167	246 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	ETR1	P38071	380 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	YEL067C	P39978	195 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	YEL028W	P39989	153 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	YER121W	P40076	114 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	YER181C	P40097	107 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	MPM1	P40364	252 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	GLC8	P41818	229 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	GPI2	P46961	280 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	LSM1	P47017	172 aa	Known RBP	0.47	□□□□□ -2.33
SWF1	YDR126W	LSM8	P47093	109 aa	Known RBP	0.47	□□□□□ -2.33
SWF1	YDR126W	YGL193C	P53097	103 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	MPC1	P53157	130 aa	Known RBP	0.47	□□□□□ -2.33
SWF1	YDR126W	YGR039W	P53225	103 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	HHO1	P53551	258 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	HSK3	P69852	69 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	FIT1	Q04433	528 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	IRC21	Q04772	201 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	ELP6	Q04868	273 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	KEI1	Q06346	221 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	FIT2	Q08906	153 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	HUT1	Q12520	339 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	COA3	Q3E7B2	85 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	KTI11	Q3E840	82 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	SCS22	Q6Q595	175 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	PET20	Q99373	253 aa		0.47	□□□□□ -2.33
SWF1	YDR126W	SPA2	P23201	1466 aa	Known RBP	0.47	□□□□□ -2.33
SWF1	YDR126W	FMP49	A0A023PZB3	126 aa		0.46	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms