RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W SPC25P40014 221 aa1.5□□□□□ -2.17
SHR3YDL212W PHB1P40961 287 aa1.5□□□□□ -2.17
SHR3YDL212W CUP9P41817 306 aa1.5□□□□□ -2.17
SHR3YDL212W GLR1P41921 483 aaKnown RBP1.5□□□□□ -2.17
SHR3YDL212W CCC1P47818 322 aa1.5□□□□□ -2.17
SHR3YDL212W YGL193CP53097 103 aa1.5□□□□□ -2.17
SHR3YDL212W DIG2Q03373 323 aaKnown RBP1.5□□□□□ -2.17
SHR3YDL212W CSN9Q03981 162 aa1.5□□□□□ -2.17
SHR3YDL212W YMR320WQ04897 101 aa1.5□□□□□ -2.17
SHR3YDL212W FIT2Q08906 153 aa1.5□□□□□ -2.17
SHR3YDL212W YOR214CQ12282 236 aa1.5□□□□□ -2.17
SHR3YDL212W ATP5P09457 212 aa1.49□□□□□ -2.17
SHR3YDL212W AQY2P0CD90 149 aa1.49□□□□□ -2.17
SHR3YDL212W SEN2P16658 377 aa1.49□□□□□ -2.17
SHR3YDL212W PRS3P38689 320 aaKnown RBP1.49□□□□□ -2.17
SHR3YDL212W HYR1P40581 163 aaKnown RBP1.49□□□□□ -2.17
SHR3YDL212W CIN5P40917 295 aa1.49□□□□□ -2.17
SHR3YDL212W FIP1P45976 327 aa1.49□□□□□ -2.17
SHR3YDL212W THG1P53215 237 aaKnown RBP1.49□□□□□ -2.17
SHR3YDL212W DYN2Q02647 92 aa1.49□□□□□ -2.17
SHR3YDL212W VPS28Q02767 242 aa1.49□□□□□ -2.17
SHR3YDL212W RCE1Q03530 315 aa1.49□□□□□ -2.17
SHR3YDL212W GAL83Q04739 417 aa1.49□□□□□ -2.17
SHR3YDL212W YPR013CQ12145 317 aa1.49□□□□□ -2.17
SHR3YDL212W RAD50P12753 1312 aa1.48□□□□□ -2.17
SHR3YDL212W PTC1P35182 281 aa1.48□□□□□ -2.17
SHR3YDL212W HTD2P38790 280 aaKnown RBP1.48□□□□□ -2.17
SHR3YDL212W NSA2P40078 261 aaKnown RBP1.48□□□□□ -2.17
SHR3YDL212W HHO1P53551 258 aa1.48□□□□□ -2.17
SHR3YDL212W YDR366CP87287 132 aa1.48□□□□□ -2.17
SHR3YDL212W YKR005CQ02203 525 aa1.48□□□□□ -2.17
SHR3YDL212W CWC27Q02770 301 aa1.48□□□□□ -2.17
SHR3YDL212W COF1Q03048 143 aaKnown RBP1.48□□□□□ -2.17
SHR3YDL212W YDR391CQ04170 232 aa1.48□□□□□ -2.17
SHR3YDL212W HRD1Q08109 551 aa1.48□□□□□ -2.17
SHR3YDL212W ECM5Q03214 1411 aa1.48□□□□□ -2.17
SHR3YDL212W RAD6P06104 172 aa1.47□□□□□ -2.17
SHR3YDL212W HSP30P25619 332 aa1.47□□□□□ -2.17
SHR3YDL212W YHL042WP38729 150 aa1.47□□□□□ -2.17
SHR3YDL212W FYV4P38783 130 aaPredicted RBP1.47□□□□□ -2.17
SHR3YDL212W HPA3P39979 161 aa1.47□□□□□ -2.17
SHR3YDL212W YEL028WP39989 153 aa1.47□□□□□ -2.17
SHR3YDL212W YNL200CP40165 246 aaKnown RBP1.47□□□□□ -2.17
SHR3YDL212W YFL065CP43539 102 aa1.47□□□□□ -2.17
SHR3YDL212W SPC24Q04477 213 aa1.47□□□□□ -2.17
SHR3YDL212W YMR252CQ04814 134 aa1.47□□□□□ -2.17
SHR3YDL212W ATP20Q12233 115 aa1.47□□□□□ -2.17
SHR3YDL212W SLO1Q3E784 85 aa1.47□□□□□ -2.17
SHR3YDL212W FAS1P07149 2051 aaKnown RBP1.47□□□□□ -2.17
SHR3YDL212W TRM3Q07527 1436 aa1.47□□□□□ -2.17
SHR3YDL212W VAR1P02381 398 aa1.46□□□□□ -2.18
SHR3YDL212W SPT14P32363 452 aa1.46□□□□□ -2.18
SHR3YDL212W RPS20P38701 121 aaKnown RBP1.46□□□□□ -2.18
SHR3YDL212W YER181CP40097 107 aa1.46□□□□□ -2.18
SHR3YDL212W YJL218WP40892 196 aaKnown RBP1.46□□□□□ -2.18
SHR3YDL212W GPI2P46961 280 aa1.46□□□□□ -2.18
SHR3YDL212W YGR039WP53225 103 aa1.46□□□□□ -2.18
SHR3YDL212W RCF2P53721 224 aa1.46□□□□□ -2.18
SHR3YDL212W TIM8P57744 87 aa1.46□□□□□ -2.18
SHR3YDL212W FMN1Q03778 218 aa1.46□□□□□ -2.18
SHR3YDL212W YPD1Q07688 167 aa1.46□□□□□ -2.18
SHR3YDL212W FCY1Q12178 158 aa1.46□□□□□ -2.18
SHR3YDL212W SRP21P32342 167 aa1.45□□□□□ -2.18
SHR3YDL212W RPB7P34087 171 aa1.45□□□□□ -2.18
SHR3YDL212W RRT1P38192 103 aa1.45□□□□□ -2.18
SHR3YDL212W YEL008WP40001 126 aa1.45□□□□□ -2.18
SHR3YDL212W GLC8P41818 229 aa1.45□□□□□ -2.18
SHR3YDL212W VMA10P48836 114 aaKnown RBP1.45□□□□□ -2.18
SHR3YDL212W SYM1Q06563 197 aa1.45□□□□□ -2.18
SHR3YDL212W SPC3Q12133 184 aa1.45□□□□□ -2.18
SHR3YDL212W RPC19P28000 142 aaKnown RBP1.44□□□□□ -2.18
SHR3YDL212W GSP2P32836 220 aaKnown RBP1.44□□□□□ -2.18
SHR3YDL212W MRPL24P36525 258 aaPredicted RBP1.44□□□□□ -2.18
SHR3YDL212W GRX5Q02784 150 aa1.44□□□□□ -2.18
SHR3YDL212W SDH7Q04401 133 aa1.44□□□□□ -2.18
SHR3YDL212W RIM9Q04734 239 aa1.44□□□□□ -2.18
SHR3YDL212W ATP14Q12349 124 aa1.44□□□□□ -2.18
SHR3YDL212W Q0144Q9ZZW2 109 aa1.44□□□□□ -2.18
SHR3YDL212W PHO13P19881 312 aa1.43□□□□□ -2.18
SHR3YDL212W SUI1P32911 108 aaKnown RBP1.43□□□□□ -2.18
SHR3YDL212W YHR140WP38842 239 aa1.43□□□□□ -2.18
SHR3YDL212W YEL067CP39978 195 aa1.43□□□□□ -2.18
SHR3YDL212W ALB1P47019 175 aaPredicted RBP1.43□□□□□ -2.18
SHR3YDL212W EST3Q03096 181 aa1.43□□□□□ -2.18
SHR3YDL212W LIP1Q03579 150 aa1.43□□□□□ -2.18
SHR3YDL212W CNL1Q06333 122 aa1.43□□□□□ -2.18
SHR3YDL212W FRQ1Q06389 190 aa1.43□□□□□ -2.18
SHR3YDL212W WIP1Q2V2P8 89 aa1.43□□□□□ -2.18
SHR3YDL212W YNL277W-AQ3E7Z0 62 aa1.43□□□□□ -2.18
SHR3YDL212W RPO41P13433 1351 aaKnown RBP1.43□□□□□ -2.18
SHR3YDL212W YHR212W-AP0CX91 67 aa1.42□□□□□ -2.18
SHR3YDL212W HSP12P22943 109 aaKnown RBP1.42□□□□□ -2.18
SHR3YDL212W YCL042WP25572 119 aa1.42□□□□□ -2.18
SHR3YDL212W RPS1AP33442 255 aaKnown RBP1.42□□□□□ -2.18
SHR3YDL212W SHB17P36136 271 aaKnown RBP1.42□□□□□ -2.18
SHR3YDL212W YEL073CP39974 107 aa1.42□□□□□ -2.18
SHR3YDL212W APS3P47064 194 aa1.42□□□□□ -2.18
SHR3YDL212W PIR1Q03178 341 aa1.42□□□□□ -2.18
SHR3YDL212W YDR102CQ03864 110 aa1.42□□□□□ -2.18
SHR3YDL212W NKP2Q06162 153 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms