RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W QCR9P22289 66 aa5.87□□□□□ -1.47
NUP84YDL116W SUA7P29055 345 aaPredicted RBP5.87□□□□□ -1.47
NUP84YDL116W YKL075CP36083 450 aa5.87□□□□□ -1.47
NUP84YDL116W DUG3P53871 357 aa5.87□□□□□ -1.47
NUP84YDL116W YLR179CQ06252 201 aaKnown RBP5.87□□□□□ -1.47
NUP84YDL116W POS5Q06892 414 aa5.87□□□□□ -1.47
NUP84YDL116W TDA4P47153 279 aa5.87□□□□□ -1.47
NUP84YDL116W TOM7P53507 60 aa5.87□□□□□ -1.47
NUP84YDL116W ATG4P53867 494 aa5.87□□□□□ -1.47
NUP84YDL116W YDC1Q02896 317 aa5.87□□□□□ -1.47
NUP84YDL116W MCH1Q07376 486 aa5.87□□□□□ -1.47
NUP84YDL116W YDL157CQ12082 118 aa5.87□□□□□ -1.47
NUP84YDL116W USB1Q12208 290 aaKnown RBP5.87□□□□□ -1.47
NUP84YDL116W YKL187CP34231 750 aa5.86□□□□□ -1.47
NUP84YDL116W SDS23P53172 527 aa5.86□□□□□ -1.47
NUP84YDL116W YDR366CP87287 132 aa5.86□□□□□ -1.47
NUP84YDL116W ARC18Q05933 178 aaKnown RBP5.86□□□□□ -1.47
NUP84YDL116W STF1P01098 86 aa5.86□□□□□ -1.47
NUP84YDL116W HAP3P13434 144 aa5.86□□□□□ -1.47
NUP84YDL116W GSP1P32835 219 aaKnown RBP5.86□□□□□ -1.47
NUP84YDL116W GSP2P32836 220 aaKnown RBP5.86□□□□□ -1.47
NUP84YDL116W NTC20P38302 140 aaPredicted RBP5.86□□□□□ -1.47
NUP84YDL116W LCL3P53153 274 aa5.86□□□□□ -1.47
NUP84YDL116W HSK3P69852 69 aa5.86□□□□□ -1.47
NUP84YDL116W YAP6Q03935 383 aa5.86□□□□□ -1.47
NUP84YDL116W YOS1Q3E834 85 aa5.86□□□□□ -1.47
NUP84YDL116W YBR126W-AQ8TGU7 68 aa5.86□□□□□ -1.47
NUP84YDL116W MIX23P38162 196 aa5.85□□□□□ -1.47
NUP84YDL116W RPB11P38902 120 aa5.85□□□□□ -1.47
NUP84YDL116W CCS1P40202 249 aaKnown RBP5.85□□□□□ -1.47
NUP84YDL116W PRE5P40302 234 aaKnown RBP5.85□□□□□ -1.47
NUP84YDL116W GPI2P46961 280 aa5.85□□□□□ -1.47
NUP84YDL116W PCP1P53259 346 aa5.85□□□□□ -1.47
NUP84YDL116W RAV2Q03956 351 aa5.85□□□□□ -1.47
NUP84YDL116W RFM1Q12192 310 aa5.85□□□□□ -1.47
NUP84YDL116W ADH2P00331 348 aaKnown RBP5.84□□□□□ -1.47
NUP84YDL116W YUH1P35127 236 aa5.84□□□□□ -1.47
NUP84YDL116W YNL200CP40165 246 aaKnown RBP5.84□□□□□ -1.47
NUP84YDL116W YGR151CP53287 111 aa5.84□□□□□ -1.47
NUP84YDL116W YMR254CQ04838 102 aa5.84□□□□□ -1.47
NUP84YDL116W YTH1Q06102 208 aaPredicted RBP5.84□□□□□ -1.47
NUP84YDL116W RFU1Q08003 200 aa5.84□□□□□ -1.47
NUP84YDL116W RPS22AP0C0W1 130 aaKnown RBP5.84□□□□□ -1.47
NUP84YDL116W RNA15P25299 296 aaPredicted RBP5.84□□□□□ -1.47
NUP84YDL116W RKI1Q12189 258 aa5.84□□□□□ -1.47
NUP84YDL116W YDR157WA0A023PZE8 133 aa5.83□□□□□ -1.48
NUP84YDL116W RPL31AP0C2H8 113 aaKnown RBP5.83□□□□□ -1.48
NUP84YDL116W RPL31BP0C2H9 113 aaKnown RBP5.83□□□□□ -1.48
NUP84YDL116W FZF1P32805 299 aa5.83□□□□□ -1.48
NUP84YDL116W DOG1P38774 246 aa5.83□□□□□ -1.48
NUP84YDL116W YIL029CP40538 142 aa5.83□□□□□ -1.48
NUP84YDL116W ECO1P43605 281 aa5.83□□□□□ -1.48
NUP84YDL116W NUP53Q03790 475 aa5.83□□□□□ -1.48
NUP84YDL116W LPP1Q04396 274 aa5.83□□□□□ -1.48
NUP84YDL116W YOL029CQ08187 201 aa5.83□□□□□ -1.48
NUP84YDL116W DAP1Q12091 152 aa5.83□□□□□ -1.48
NUP84YDL116W WIP1Q2V2P8 89 aa5.83□□□□□ -1.48
NUP84YDL116W ROX3P25046 220 aa5.83□□□□□ -1.48
NUP84YDL116W BDH1P39714 382 aa5.83□□□□□ -1.48
NUP84YDL116W CPD1P53314 239 aa5.83□□□□□ -1.48
NUP84YDL116W TGS1Q12052 315 aa5.83□□□□□ -1.48
NUP84YDL116W ZRT1P32804 376 aa5.82□□□□□ -1.48
NUP84YDL116W SEC24P40482 926 aaKnown RBP5.82□□□□□ -1.48
NUP84YDL116W YFL015CP43578 164 aa5.82□□□□□ -1.48
NUP84YDL116W YDL183CP48569 320 aa5.82□□□□□ -1.48
NUP84YDL116W YOR029WQ12243 111 aa5.82□□□□□ -1.48
NUP84YDL116W UTR5P32630 166 aa5.82□□□□□ -1.48
NUP84YDL116W ALG14P38242 237 aa5.82□□□□□ -1.48
NUP84YDL116W PSD1P39006 500 aa5.82□□□□□ -1.48
NUP84YDL116W SAS2P40963 338 aa5.82□□□□□ -1.48
NUP84YDL116W HNT3Q08702 217 aa5.82□□□□□ -1.48
NUP84YDL116W PAU16P35994 123 aa5.81□□□□□ -1.48
NUP84YDL116W YGP1P38616 354 aaKnown RBP5.81□□□□□ -1.48
NUP84YDL116W YER084WP40057 128 aa5.81□□□□□ -1.48
NUP84YDL116W RPA43P46669 326 aa5.81□□□□□ -1.48
NUP84YDL116W MIC26P50087 233 aa5.81□□□□□ -1.48
NUP84YDL116W MIC27P50945 234 aa5.81□□□□□ -1.48
NUP84YDL116W COX1P00401 534 aa5.8□□□□□ -1.48
NUP84YDL116W YKR073CP36153 106 aa5.8□□□□□ -1.48
NUP84YDL116W THG1P53215 237 aaKnown RBP5.8□□□□□ -1.48
NUP84YDL116W YLR050CQ12155 161 aaKnown RBP5.8□□□□□ -1.48
NUP84YDL116W BOL1Q3E793 110 aa5.8□□□□□ -1.48
NUP84YDL116W RPI1P23250 407 aaKnown RBP5.8□□□□□ -1.48
NUP84YDL116W LSM2P38203 95 aaKnown RBP5.8□□□□□ -1.48
NUP84YDL116W GON7P46984 123 aa5.8□□□□□ -1.48
NUP84YDL116W YDR215CQ12240 137 aa5.8□□□□□ -1.48
NUP84YDL116W SEC11P15367 167 aa5.79□□□□□ -1.48
NUP84YDL116W RAD23P32628 398 aaKnown RBP5.79□□□□□ -1.48
NUP84YDL116W UTH1P36135 365 aa5.79□□□□□ -1.48
NUP84YDL116W MSL1P40567 111 aaPredicted RBP5.79□□□□□ -1.48
NUP84YDL116W HAC1P41546 238 aa5.79□□□□□ -1.48
NUP84YDL116W BOR1P53838 576 aa5.79□□□□□ -1.48
NUP84YDL116W SWT21P53873 357 aaPredicted RBP5.79□□□□□ -1.48
NUP84YDL116W GIM5Q04493 163 aa5.79□□□□□ -1.48
NUP84YDL116W ATO3Q12359 275 aa5.79□□□□□ -1.48
NUP84YDL116W RPL23AP0CX41 137 aaKnown RBP5.79□□□□□ -1.48
NUP84YDL116W RPL23BP0CX42 137 aaKnown RBP5.79□□□□□ -1.48
NUP84YDL116W PRY2P36110 329 aa5.79□□□□□ -1.48
NUP84YDL116W AGE2P40529 298 aa5.79□□□□□ -1.48
NUP84YDL116W SAL1D6W196 494 aa5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms