RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W SNX4P47057 423 aa1.22□□□□□ -2.21
TRM3YDL112W MIC26P50087 233 aa1.22□□□□□ -2.21
TRM3YDL112W MSC3Q05812 728 aa1.22□□□□□ -2.21
TRM3YDL112W RRG8Q06109 277 aa1.22□□□□□ -2.21
TRM3YDL112W YPL264CQ08980 353 aa1.22□□□□□ -2.21
TRM3YDL112W PUT1P09368 476 aa1.22□□□□□ -2.21
TRM3YDL112W NHP6BP11633 99 aaKnown RBP1.22□□□□□ -2.21
TRM3YDL112W YBL010CP32788 280 aa1.22□□□□□ -2.21
TRM3YDL112W GPX2P38143 162 aa1.22□□□□□ -2.21
TRM3YDL112W VMA22P38784 181 aa1.22□□□□□ -2.21
TRM3YDL112W IMP2P46972 177 aa1.22□□□□□ -2.21
TRM3YDL112W YGR050CP53231 118 aa1.22□□□□□ -2.21
TRM3YDL112W BUD25P85052 153 aa1.22□□□□□ -2.21
TRM3YDL112W LOA1Q06508 300 aa1.22□□□□□ -2.21
TRM3YDL112W RDS3Q06835 107 aaPredicted RBP1.22□□□□□ -2.21
TRM3YDL112W AYT1Q12226 474 aa1.22□□□□□ -2.21
TRM3YDL112W YLL053CP0CD98 152 aa1.22□□□□□ -2.21
TRM3YDL112W ERV15P38312 142 aa1.22□□□□□ -2.21
TRM3YDL112W PAM16P42949 149 aa1.22□□□□□ -2.21
TRM3YDL112W SGF11Q03067 99 aa1.22□□□□□ -2.21
TRM3YDL112W YML018CQ03730 393 aa1.22□□□□□ -2.21
TRM3YDL112W MRPS8Q03799 155 aa1.22□□□□□ -2.21
TRM3YDL112W SDH7Q04401 133 aa1.22□□□□□ -2.21
TRM3YDL112W YLR042CQ07990 161 aa1.22□□□□□ -2.21
TRM3YDL112W YOR283WQ12040 230 aaKnown RBP1.22□□□□□ -2.21
TRM3YDL112W YCT1Q12235 531 aa1.22□□□□□ -2.21
TRM3YDL112W YCR016WP25617 290 aaKnown RBP1.21□□□□□ -2.21
TRM3YDL112W YPT31P38555 223 aaKnown RBP1.21□□□□□ -2.21
TRM3YDL112W HTD2P38790 280 aaKnown RBP1.21□□□□□ -2.21
TRM3YDL112W SSO2P39926 295 aa1.21□□□□□ -2.21
TRM3YDL112W YER137CP40083 148 aaKnown RBP1.21□□□□□ -2.21
TRM3YDL112W JLP2P40206 208 aa1.21□□□□□ -2.21
TRM3YDL112W GVP36P40531 326 aaKnown RBP1.21□□□□□ -2.21
TRM3YDL112W SAS2P40963 338 aa1.21□□□□□ -2.21
TRM3YDL112W YMR244WQ04018 355 aa1.21□□□□□ -2.21
TRM3YDL112W SUS1Q6WNK7 96 aa1.21□□□□□ -2.21
TRM3YDL112W RPL2AP0CX45 254 aaKnown RBP1.21□□□□□ -2.22
TRM3YDL112W RPL2BP0CX46 254 aaKnown RBP1.21□□□□□ -2.22
TRM3YDL112W CAP2P13517 287 aa1.21□□□□□ -2.22
TRM3YDL112W WSS1P38838 269 aa1.21□□□□□ -2.22
TRM3YDL112W DFG10P40526 253 aa1.21□□□□□ -2.22
TRM3YDL112W YCH1P42937 148 aa1.21□□□□□ -2.22
TRM3YDL112W GPI2P46961 280 aa1.21□□□□□ -2.22
TRM3YDL112W YIP3P53633 176 aa1.21□□□□□ -2.22
TRM3YDL112W HCH1P53834 153 aa1.21□□□□□ -2.22
TRM3YDL112W MAK3Q03503 176 aa1.21□□□□□ -2.22
TRM3YDL112W YHR213WP0CI67 198 aa1.21□□□□□ -2.22
TRM3YDL112W RPS18AP0CX55 146 aaKnown RBP1.21□□□□□ -2.22
TRM3YDL112W RPS18BP0CX56 146 aaPredicted RBP1.21□□□□□ -2.22
TRM3YDL112W NRG2P38082 220 aa1.21□□□□□ -2.22
TRM3YDL112W NSA2P40078 261 aaKnown RBP1.21□□□□□ -2.22
TRM3YDL112W HST4P53688 370 aa1.21□□□□□ -2.22
TRM3YDL112W ERV25P54837 211 aaKnown RBP1.21□□□□□ -2.22
TRM3YDL112W CUP2P15315 225 aa1.21□□□□□ -2.22
TRM3YDL112W YCR025CP25352 136 aa1.21□□□□□ -2.22
TRM3YDL112W LSM12P38828 187 aaKnown RBP1.21□□□□□ -2.22
TRM3YDL112W BFR1P38934 470 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22 RIP-Chip
TRM3YDL112W GLE2P40066 365 aa1.21□□□□□ -2.22
TRM3YDL112W YNL200CP40165 246 aaKnown RBP1.21□□□□□ -2.22
TRM3YDL112W RPR2P40571 144 aa1.21□□□□□ -2.22
TRM3YDL112W MRPS16Q02608 121 aa1.21□□□□□ -2.22
TRM3YDL112W YGR240C-AQ3E786 66 aa1.21□□□□□ -2.22
TRM3YDL112W DDI2P0CH63 225 aa1.2□□□□□ -2.22
TRM3YDL112W DDI3P0CH64 225 aa1.2□□□□□ -2.22
TRM3YDL112W SPT14P32363 452 aa1.2□□□□□ -2.22
TRM3YDL112W YKL162CP36052 402 aa1.2□□□□□ -2.22
TRM3YDL112W MRPL3P36516 390 aa1.2□□□□□ -2.22
TRM3YDL112W SLM6P38343 150 aa1.2□□□□□ -2.22
TRM3YDL112W CAT5P41735 233 aa1.2□□□□□ -2.22
TRM3YDL112W AIM24P47127 394 aa1.2□□□□□ -2.22
TRM3YDL112W CAX4P53223 239 aa1.2□□□□□ -2.22
TRM3YDL112W YLR179CQ06252 201 aaKnown RBP1.2□□□□□ -2.22
TRM3YDL112W YPR145C-AQ2V2P0 78 aa1.2□□□□□ -2.22
TRM3YDL112W SWM2P40342 146 aa1.2□□□□□ -2.22
TRM3YDL112W YJR015WP47090 510 aa1.2□□□□□ -2.22
TRM3YDL112W PIS1P06197 220 aaKnown RBP1.2□□□□□ -2.22
TRM3YDL112W GAT4P40569 121 aa1.2□□□□□ -2.22
TRM3YDL112W BOR1P53838 576 aa1.2□□□□□ -2.22
TRM3YDL112W HAL1Q01766 294 aa1.2□□□□□ -2.22
TRM3YDL112W YFH1Q07540 174 aa1.2□□□□□ -2.22
TRM3YDL112W UTP23Q12339 254 aaKnown RBP1.2□□□□□ -2.22
TRM3YDL112W YCR075W-AQ3E830 75 aa1.2□□□□□ -2.22
TRM3YDL112W VAR1P02381 398 aa1.19□□□□□ -2.22
TRM3YDL112W MRPL20P22354 195 aaPredicted RBP1.19□□□□□ -2.22
TRM3YDL112W EMP24P32803 203 aaKnown RBP1.19□□□□□ -2.22
TRM3YDL112W AVT5P38176 459 aa1.19□□□□□ -2.22
TRM3YDL112W POP8P38208 133 aa1.19□□□□□ -2.22
TRM3YDL112W MIG3P39943 394 aa1.19□□□□□ -2.22
TRM3YDL112W SPC1P46965 94 aa1.19□□□□□ -2.22
TRM3YDL112W AIM25P47140 327 aa1.19□□□□□ -2.22
TRM3YDL112W CWC25P53854 179 aaKnown RBP1.19□□□□□ -2.22
TRM3YDL112W LSM7P53905 115 aaKnown RBP1.19□□□□□ -2.22
TRM3YDL112W YLR031WQ07978 186 aa1.19□□□□□ -2.22
TRM3YDL112W SCM3Q12334 223 aa1.19□□□□□ -2.22
TRM3YDL112W ZRC1P20107 442 aa1.19□□□□□ -2.22
TRM3YDL112W PAN3P36102 679 aaPredicted RBP1.19□□□□□ -2.22
TRM3YDL112W SHB17P36136 271 aaKnown RBP1.19□□□□□ -2.22
TRM3YDL112W VHS2P40463 436 aa1.19□□□□□ -2.22
TRM3YDL112W COX16P47081 118 aa1.19□□□□□ -2.22
TRM3YDL112W SRB7P47822 140 aa1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 128.2 ms