RNA–Protein interactions for RNA: YCR005C

CIT2, Transcript of Citrate synthase, yeast

Gene CIT2, Length 1,383 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CIT2	YCR005C	SPO13	P23624	291 aa		5.77	□□□□□ -1.49
CIT2	YCR005C	AME1	P38313	324 aa		5.77	□□□□□ -1.49
CIT2	YCR005C	YPT31	P38555	223 aa	Known RBP	5.77	□□□□□ -1.49
CIT2	YCR005C	LST8	P41318	303 aa		5.77	□□□□□ -1.49
CIT2	YCR005C	ADD37	Q03233	198 aa		5.77	□□□□□ -1.49
CIT2	YCR005C	YOR015W	Q12169	119 aa		5.77	□□□□□ -1.49
CIT2	YCR005C	RKI1	Q12189	258 aa		5.77	□□□□□ -1.49
CIT2	YCR005C	ATP14	Q12349	124 aa		5.77	□□□□□ -1.49
CIT2	YCR005C	CCW14	O13547	238 aa		5.76	□□□□□ -1.49
CIT2	YCR005C	MRS3	P10566	314 aa		5.76	□□□□□ -1.49
CIT2	YCR005C	QCR9	P22289	66 aa		5.76	□□□□□ -1.49
CIT2	YCR005C	YCR025C	P25352	136 aa		5.76	□□□□□ -1.49
CIT2	YCR005C	MSK1	P32048	576 aa		5.76	□□□□□ -1.49
CIT2	YCR005C	SRB6	P32570	121 aa		5.76	□□□□□ -1.49
CIT2	YCR005C	SIP1	P32578	815 aa		5.76	□□□□□ -1.49
CIT2	YCR005C	RIB5	P38145	238 aa		5.76	□□□□□ -1.49
CIT2	YCR005C	YBL071C	P38185	102 aa		5.76	□□□□□ -1.49
CIT2	YCR005C	YJR015W	P47090	510 aa		5.76	□□□□□ -1.49
CIT2	YCR005C	CAF40	P53829	373 aa		5.76	□□□□□ -1.49
CIT2	YCR005C	FMP41	P53889	259 aa	Known RBP	5.76	□□□□□ -1.49
CIT2	YCR005C	DXO1	Q06349	442 aa		5.76	□□□□□ -1.49
CIT2	YCR005C	RPL27A	P0C2H6	136 aa	Known RBP	5.75	□□□□□ -1.49
CIT2	YCR005C	RPL27B	P0C2H7	136 aa	Known RBP	5.75	□□□□□ -1.49
CIT2	YCR005C	ELO2	P25358	347 aa		5.75	□□□□□ -1.49
CIT2	YCR005C	CDC50	P25656	391 aa		5.75	□□□□□ -1.49
CIT2	YCR005C	SHB17	P36136	271 aa	Known RBP	5.75	□□□□□ -1.49
CIT2	YCR005C	SDH8	P38345	138 aa		5.75	□□□□□ -1.49
CIT2	YCR005C	SPC25	P40014	221 aa		5.75	□□□□□ -1.49
CIT2	YCR005C	YGR269W	P40326	108 aa		5.75	□□□□□ -1.49
CIT2	YCR005C	MCM22	P47167	239 aa		5.75	□□□□□ -1.49
CIT2	YCR005C	TMA23	Q03525	211 aa		5.75	□□□□□ -1.49
CIT2	YCR005C	YMR166C	Q03829	368 aa		5.75	□□□□□ -1.49
CIT2	YCR005C	ARR3	Q06598	404 aa		5.75	□□□□□ -1.49
CIT2	YCR005C	USV1	Q12132	391 aa		5.75	□□□□□ -1.49
CIT2	YCR005C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
CIT2	YCR005C	MRPL38	P35996	138 aa	Predicted RBP	5.74	□□□□□ -1.49
CIT2	YCR005C	RIB4	P50861	169 aa	Predicted RBP	5.74	□□□□□ -1.49
CIT2	YCR005C	MIC27	P50945	234 aa		5.74	□□□□□ -1.49
CIT2	YCR005C	ODC1	Q03028	310 aa		5.74	□□□□□ -1.49
CIT2	YCR005C	CTR3	Q06686	241 aa		5.74	□□□□□ -1.49
CIT2	YCR005C	POS5	Q06892	414 aa		5.74	□□□□□ -1.49
CIT2	YCR005C	COX19	Q3E731	98 aa		5.74	□□□□□ -1.49
CIT2	YCR005C	YCL001W-B	Q96VH2	84 aa		5.74	□□□□□ -1.49
CIT2	YCR005C	PIS1	P06197	220 aa	Known RBP	5.73	□□□□□ -1.49
CIT2	YCR005C	LDS1	P31379	325 aa		5.73	□□□□□ -1.49
CIT2	YCR005C	FPR2	P32472	135 aa		5.73	□□□□□ -1.49
CIT2	YCR005C	YKR045C	P36138	183 aa		5.73	□□□□□ -1.49
CIT2	YCR005C	PRS4	P38063	326 aa	Predicted RBP	5.73	□□□□□ -1.49
CIT2	YCR005C	RRT1	P38192	103 aa		5.73	□□□□□ -1.49
CIT2	YCR005C	QDR3	P38227	689 aa		5.73	□□□□□ -1.49
CIT2	YCR005C	SMD3	P43321	101 aa	Known RBP	5.73	□□□□□ -1.49
CIT2	YCR005C	BOR1	P53838	576 aa		5.73	□□□□□ -1.49
CIT2	YCR005C	YHP1	Q04116	353 aa		5.73	□□□□□ -1.49
CIT2	YCR005C	SHH3	Q04487	196 aa		5.73	□□□□□ -1.49
CIT2	YCR005C	SME1	Q12330	94 aa	Predicted RBP	5.73	□□□□□ -1.49
CIT2	YCR005C	SOD1	P00445	154 aa	Known RBP	5.72	□□□□□ -1.49
CIT2	YCR005C	AHT1	P29589	182 aa		5.72	□□□□□ -1.49
CIT2	YCR005C	AVT5	P38176	459 aa		5.72	□□□□□ -1.49
CIT2	YCR005C	DER1	P38307	211 aa		5.72	□□□□□ -1.49
CIT2	YCR005C	DOG2	P38773	246 aa		5.72	□□□□□ -1.49
CIT2	YCR005C	DOG1	P38774	246 aa		5.72	□□□□□ -1.49
CIT2	YCR005C	FLO5	P38894	1075 aa		5.72	□□□□□ -1.49
CIT2	YCR005C	YJL213W	P40896	331 aa		5.72	□□□□□ -1.49
CIT2	YCR005C	YMR007W	Q03675	126 aa		5.72	□□□□□ -1.49
CIT2	YCR005C	SDH7	Q04401	133 aa		5.72	□□□□□ -1.49
CIT2	YCR005C	VMA9	Q3E7B6	73 aa		5.72	□□□□□ -1.49
CIT2	YCR005C	YBR126W-A	Q8TGU7	68 aa		5.72	□□□□□ -1.49
CIT2	YCR005C	URA2	P07259	2214 aa	Known RBP	5.71	□□□□□ -1.5
CIT2	YCR005C	YBL059W	P34224	193 aa		5.71	□□□□□ -1.5
CIT2	YCR005C	SAS2	P40963	338 aa		5.71	□□□□□ -1.5
CIT2	YCR005C	AIM24	P47127	394 aa		5.71	□□□□□ -1.5
CIT2	YCR005C	YMR316C-A	I2HB70	103 aa		5.7	□□□□□ -1.5
CIT2	YCR005C	NHP6A	P11632	93 aa	Known RBP	5.7	□□□□□ -1.5
CIT2	YCR005C	YPS1	P32329	569 aa		5.7	□□□□□ -1.5
CIT2	YCR005C	GSP1	P32835	219 aa	Known RBP	5.7	□□□□□ -1.5
CIT2	YCR005C	GSP2	P32836	220 aa	Known RBP	5.7	□□□□□ -1.5
CIT2	YCR005C	YAR068W	P39564	161 aa		5.7	□□□□□ -1.5
CIT2	YCR005C	HIT1	P46973	164 aa		5.7	□□□□□ -1.5
CIT2	YCR005C	YGL185C	P53100	379 aa		5.7	□□□□□ -1.5
CIT2	YCR005C	LST7	P53237	242 aa		5.7	□□□□□ -1.5
CIT2	YCR005C	PAU4	P53427	120 aa		5.7	□□□□□ -1.5
CIT2	YCR005C	DUG3	P53871	357 aa		5.7	□□□□□ -1.5
CIT2	YCR005C	SPG4	Q04438	115 aa		5.7	□□□□□ -1.5
CIT2	YCR005C	PBP4	Q07362	185 aa	Known RBP	5.7	□□□□□ -1.5
CIT2	YCR005C	PAU1	P0CE88	120 aa		5.69	□□□□□ -1.5
CIT2	YCR005C	PAU14	P0CE89	120 aa		5.69	□□□□□ -1.5
CIT2	YCR005C	PAU6	P0CE90	120 aa		5.69	□□□□□ -1.5
CIT2	YCR005C	PAU18	P0CE91	120 aa		5.69	□□□□□ -1.5
CIT2	YCR005C	PAU8	P0CE92	120 aa		5.69	□□□□□ -1.5
CIT2	YCR005C	PAU11	P0CE93	120 aa		5.69	□□□□□ -1.5
CIT2	YCR005C	RNA15	P25299	296 aa	Predicted RBP	5.69	□□□□□ -1.5
CIT2	YCR005C	ALK2	P32789	676 aa	Predicted RBP	5.69	□□□□□ -1.5
CIT2	YCR005C	ELF1	P36053	145 aa		5.69	□□□□□ -1.5
CIT2	YCR005C	RPL14A	P36105	138 aa	Known RBP	5.69	□□□□□ -1.5
CIT2	YCR005C	AIM29	P36154	155 aa		5.69	□□□□□ -1.5
CIT2	YCR005C	CSH1	P38287	376 aa		5.69	□□□□□ -1.5
CIT2	YCR005C	PAU13	P38725	120 aa		5.69	□□□□□ -1.5
CIT2	YCR005C	RPL14B	P38754	138 aa	Known RBP	5.69	□□□□□ -1.5
CIT2	YCR005C	BDH1	P39714	382 aa		5.69	□□□□□ -1.5
CIT2	YCR005C	PAU10	Q03050	120 aa		5.69	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms