RNA–Protein interactions for RNA: YBR074W

PFF1, Transcript of Multi-spanning vacuolar membrane protease, yeastyeast

Gene PFF1, Length 2,931 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFF1YBR074W YPQ1Q12010 308 aa2.32□□□□□ -2.04
PFF1YBR074W YDL180WQ12301 547 aa2.32□□□□□ -2.04
PFF1YBR074W RDL1Q12305 139 aaKnown RBP2.32□□□□□ -2.04
PFF1YBR074W YKR104WP0CE69 306 aa2.31□□□□□ -2.04
PFF1YBR074W YMR31P19955 123 aa2.31□□□□□ -2.04
PFF1YBR074W RPL21AQ02753 160 aaKnown RBP2.31□□□□□ -2.04
PFF1YBR074W YPL077CQ02831 240 aa2.31□□□□□ -2.04
PFF1YBR074W YDR042CQ03205 200 aa2.31□□□□□ -2.04
PFF1YBR074W VPS71Q03433 280 aa2.31□□□□□ -2.04
PFF1YBR074W NIP7Q08962 181 aaKnown RBP2.31□□□□□ -2.04
PFF1YBR074W SME1Q12330 94 aaPredicted RBP2.31□□□□□ -2.04
PFF1YBR074W RPL21BQ12672 160 aaKnown RBP2.31□□□□□ -2.04
PFF1YBR074W SOD1P00445 154 aaKnown RBP2.31□□□□□ -2.04
PFF1YBR074W RPL1AP0CX43 217 aaKnown RBP2.31□□□□□ -2.04
PFF1YBR074W RPL1BP0CX44 217 aaKnown RBP2.31□□□□□ -2.04
PFF1YBR074W REC114P32841 428 aa2.31□□□□□ -2.04
PFF1YBR074W MRPS5P33759 307 aa2.31□□□□□ -2.04
PFF1YBR074W SOR1P35497 357 aaKnown RBP2.31□□□□□ -2.04
PFF1YBR074W FMO1P38866 432 aa2.31□□□□□ -2.04
PFF1YBR074W YDL186WP48568 277 aa2.31□□□□□ -2.04
PFF1YBR074W ERG13P54839 491 aaKnown RBP2.31□□□□□ -2.04
PFF1YBR074W YDR391CQ04170 232 aa2.31□□□□□ -2.04
PFF1YBR074W GIM5Q04493 163 aa2.31□□□□□ -2.04
PFF1YBR074W ADH6Q04894 360 aaKnown RBP2.31□□□□□ -2.04
PFF1YBR074W YTH1Q06102 208 aaPredicted RBP2.31□□□□□ -2.04
PFF1YBR074W SOR2Q07786 357 aa2.31□□□□□ -2.04
PFF1YBR074W CPR2P23285 205 aa2.31□□□□□ -2.04
PFF1YBR074W HMX1P32339 317 aa2.31□□□□□ -2.04
PFF1YBR074W RPA12P32529 125 aaKnown RBP2.31□□□□□ -2.04
PFF1YBR074W YKR041WP36134 250 aa2.31□□□□□ -2.04
PFF1YBR074W ECM14P38836 430 aa2.31□□□□□ -2.04
PFF1YBR074W YHR138CP38841 114 aaPredicted RBP2.31□□□□□ -2.04
PFF1YBR074W SUR7P54003 302 aa2.31□□□□□ -2.04
PFF1YBR074W DAD3P69850 94 aa2.31□□□□□ -2.04
PFF1YBR074W TSA2Q04120 196 aa2.31□□□□□ -2.04
PFF1YBR074W ARC18Q05933 178 aaKnown RBP2.31□□□□□ -2.04
PFF1YBR074W MIM1Q08176 113 aa2.31□□□□□ -2.04
PFF1YBR074W ATO3Q12359 275 aa2.31□□□□□ -2.04
PFF1YBR074W GEP5Q12393 293 aa2.31□□□□□ -2.04
PFF1YBR074W MDM10P18409 493 aa2.3□□□□□ -2.04
PFF1YBR074W MRS4P23500 304 aa2.3□□□□□ -2.04
PFF1YBR074W YPT10P38146 199 aa2.3□□□□□ -2.04
PFF1YBR074W ECM34P38728 170 aa2.3□□□□□ -2.04
PFF1YBR074W YHR210CP38893 341 aa2.3□□□□□ -2.04
PFF1YBR074W YDL218WQ07629 317 aa2.3□□□□□ -2.04
PFF1YBR074W RFM1Q12192 310 aa2.3□□□□□ -2.04
PFF1YBR074W FOL3Q12676 427 aaPredicted RBP2.3□□□□□ -2.04
PFF1YBR074W DFM1Q12743 341 aaKnown RBP2.3□□□□□ -2.04
PFF1YBR074W YCR075W-AQ3E830 75 aa2.3□□□□□ -2.04
PFF1YBR074W ELO2P25358 347 aa2.3□□□□□ -2.04
PFF1YBR074W WSC4P38739 605 aa2.3□□□□□ -2.04
PFF1YBR074W YHR173CP38864 112 aa2.3□□□□□ -2.04
PFF1YBR074W ELO1P39540 310 aa2.3□□□□□ -2.04
PFF1YBR074W CTK2P46962 323 aa2.3□□□□□ -2.04
PFF1YBR074W MSY1P48527 492 aa2.3□□□□□ -2.04
PFF1YBR074W SBH2P52871 88 aa2.3□□□□□ -2.04
PFF1YBR074W CAB4P53332 305 aa2.3□□□□□ -2.04
PFF1YBR074W NAT3Q06504 195 aa2.3□□□□□ -2.04
PFF1YBR074W RPL7BQ12213 244 aaKnown RBP2.3□□□□□ -2.04
PFF1YBR074W SMT3Q12306 101 aaKnown RBP2.3□□□□□ -2.04
PFF1YBR074W UTP23Q12339 254 aaKnown RBP2.3□□□□□ -2.04
PFF1YBR074W POM34Q12445 299 aa2.3□□□□□ -2.04
PFF1YBR074W YBR255C-AQ3E776 120 aa2.3□□□□□ -2.04
PFF1YBR074W COX1P00401 534 aa2.29□□□□□ -2.04
PFF1YBR074W MRS1P07266 363 aa2.29□□□□□ -2.04
PFF1YBR074W YGL010WP25338 174 aa2.29□□□□□ -2.04
PFF1YBR074W YND1P40009 630 aa2.29□□□□□ -2.04
PFF1YBR074W GLE2P40066 365 aa2.29□□□□□ -2.04
PFF1YBR074W ATF1P40353 525 aa2.29□□□□□ -2.04
PFF1YBR074W DFG10P40526 253 aa2.29□□□□□ -2.04
PFF1YBR074W EGT2P42835 1041 aa2.29□□□□□ -2.04
PFF1YBR074W TDA7P53882 636 aaPredicted RBP2.29□□□□□ -2.04
PFF1YBR074W MGR2Q02889 113 aa2.29□□□□□ -2.04
PFF1YBR074W DGA1Q08650 418 aa2.29□□□□□ -2.04
PFF1YBR074W YGL258W-AQ3E740 77 aa2.29□□□□□ -2.04
PFF1YBR074W HTL1Q9URQ5 78 aa2.29□□□□□ -2.04
PFF1YBR074W RPL20AP0CX23 172 aaKnown RBP2.29□□□□□ -2.04
PFF1YBR074W RPL20BP0CX24 172 aaPredicted RBP2.29□□□□□ -2.04
PFF1YBR074W TOM40P23644 387 aaKnown RBP2.29□□□□□ -2.04
PFF1YBR074W YCR023CP25351 611 aa2.29□□□□□ -2.04
PFF1YBR074W YPS1P32329 569 aa2.29□□□□□ -2.04
PFF1YBR074W MRPL24P36525 258 aaPredicted RBP2.29□□□□□ -2.04
PFF1YBR074W UBS1P38290 277 aa2.29□□□□□ -2.04
PFF1YBR074W SWT21P53873 357 aaPredicted RBP2.29□□□□□ -2.04
PFF1YBR074W CRZ1P53968 678 aa2.29□□□□□ -2.04
PFF1YBR074W USV1Q12132 391 aa2.29□□□□□ -2.04
PFF1YBR074W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
PFF1YBR074W VPS63O13549 108 aa2.28□□□□□ -2.04
PFF1YBR074W CDC36P06100 191 aaPredicted RBP2.28□□□□□ -2.04
PFF1YBR074W RPL27BP0C2H7 136 aaKnown RBP2.28□□□□□ -2.04
PFF1YBR074W CSH1P38287 376 aa2.28□□□□□ -2.04
PFF1YBR074W ARC40P38328 384 aaKnown RBP2.28□□□□□ -2.04
PFF1YBR074W YNL092WP53934 400 aa2.28□□□□□ -2.04
PFF1YBR074W DPP1Q05521 289 aa2.28□□□□□ -2.04
PFF1YBR074W IRC19Q07843 230 aa2.28□□□□□ -2.04
PFF1YBR074W USB1Q12208 290 aaKnown RBP2.28□□□□□ -2.04
PFF1YBR074W YLR111WQ12528 110 aa2.28□□□□□ -2.04
PFF1YBR074W DOG2P38773 246 aa2.28□□□□□ -2.04
PFF1YBR074W CUP9P41817 306 aa2.28□□□□□ -2.04
PFF1YBR074W SPG5P42933 373 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms