RNA–Protein interactions for RNA: YBR058C-A

TSC3, Transcript of Protein that stimulates the activity of serine palmitoyltransferase, yeastyeast

Gene TSC3, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSC3YBR058C-A NQM1P53228 333 aaPredicted RBP0.14□□□□□ -2.39
TSC3YBR058C-A YDL157CQ12082 118 aa0.14□□□□□ -2.39
TSC3YBR058C-A YOR214CQ12282 236 aa0.14□□□□□ -2.39
TSC3YBR058C-A CAF4P36130 643 aa0.13□□□□□ -2.39
TSC3YBR058C-A YEL073CP39974 107 aa0.13□□□□□ -2.39
TSC3YBR058C-A APS3P47064 194 aa0.13□□□□□ -2.39
TSC3YBR058C-A TTI2P47168 421 aa0.13□□□□□ -2.39
TSC3YBR058C-A YML079WQ03629 201 aa0.13□□□□□ -2.39
TSC3YBR058C-A ROM2P51862 1356 aaKnown RBP0.13□□□□□ -2.39
TSC3YBR058C-A NVJ1P38881 321 aa0.12□□□□□ -2.39
TSC3YBR058C-A CIN5P40917 295 aa0.12□□□□□ -2.39
TSC3YBR058C-A GLC8P41818 229 aa0.12□□□□□ -2.39
TSC3YBR058C-A SPS2P08459 502 aa0.11□□□□□ -2.39
TSC3YBR058C-A RPS25BP0C0T4 108 aaKnown RBP0.11□□□□□ -2.39
TSC3YBR058C-A RPL43AP0CX25 92 aaKnown RBP0.11□□□□□ -2.39
TSC3YBR058C-A RPL43BP0CX26 92 aa0.11□□□□□ -2.39
TSC3YBR058C-A APA2P22108 325 aa0.11□□□□□ -2.39
TSC3YBR058C-A HPT1Q04178 221 aaKnown RBP0.11□□□□□ -2.39
TSC3YBR058C-A RPS25AQ3E792 108 aaPredicted RBP0.11□□□□□ -2.39
TSC3YBR058C-A SHG1P38337 142 aa0.1□□□□□ -2.39
TSC3YBR058C-A CCC1P47818 322 aa0.1□□□□□ -2.39
TSC3YBR058C-A SNO1Q03144 224 aa0.1□□□□□ -2.39
TSC3YBR058C-A YDL241WQ07738 123 aa0.1□□□□□ -2.39
TSC3YBR058C-A CMC4Q3E7A9 73 aa0.1□□□□□ -2.39
TSC3YBR058C-A RAD6P06104 172 aa0.09□□□□□ -2.4
TSC3YBR058C-A INO4P13902 151 aa0.09□□□□□ -2.4
TSC3YBR058C-A SPT14P32363 452 aa0.09□□□□□ -2.4
TSC3YBR058C-A YBR027CP38220 110 aa0.09□□□□□ -2.4
TSC3YBR058C-A YMR141CP40211 102 aa0.09□□□□□ -2.4
TSC3YBR058C-A SYM1Q06563 197 aa0.09□□□□□ -2.4
TSC3YBR058C-A TRM3Q07527 1436 aa0.09□□□□□ -2.4
TSC3YBR058C-A NUF2P33895 451 aa0.08□□□□□ -2.4
TSC3YBR058C-A PTC1P35182 281 aa0.08□□□□□ -2.4
TSC3YBR058C-A CSH1P38287 376 aa0.08□□□□□ -2.4
TSC3YBR058C-A YEL028WP39989 153 aa0.08□□□□□ -2.4
TSC3YBR058C-A GLR1P41921 483 aaKnown RBP0.08□□□□□ -2.4
TSC3YBR058C-A GEP7P53171 287 aa0.08□□□□□ -2.4
TSC3YBR058C-A HOP2P53187 214 aa0.08□□□□□ -2.4
TSC3YBR058C-A CGR1P53188 120 aa0.08□□□□□ -2.4
TSC3YBR058C-A YNL122CP53921 115 aaPredicted RBP0.08□□□□□ -2.4
TSC3YBR058C-A MGR2Q02889 113 aa0.08□□□□□ -2.4
TSC3YBR058C-A VAM10Q08474 114 aa0.08□□□□□ -2.4
TSC3YBR058C-A ATG8P38182 117 aaRIP-Chip data0.07□□□□□ -2.4not detected
TSC3YBR058C-A TIM13P53299 105 aa0.07□□□□□ -2.4
TSC3YBR058C-A HRD1Q08109 551 aa0.07□□□□□ -2.4
TSC3YBR058C-A YLR307C-AQ3E825 87 aa0.07□□□□□ -2.4
TSC3YBR058C-A HSL1P34244 1518 aa0.07□□□□□ -2.4
TSC3YBR058C-A HAP2P06774 265 aa0.06□□□□□ -2.4
TSC3YBR058C-A JAC1P53193 184 aa0.06□□□□□ -2.4
TSC3YBR058C-A LIP1Q03579 150 aa0.06□□□□□ -2.4
TSC3YBR058C-A YOR072WQ08486 104 aa0.06□□□□□ -2.4
TSC3YBR058C-A RPS22AP0C0W1 130 aaKnown RBP0.05□□□□□ -2.4
TSC3YBR058C-A XPT1P47165 209 aa0.05□□□□□ -2.4
TSC3YBR058C-A YPR114WQ06107 315 aa0.05□□□□□ -2.4
TSC3YBR058C-A ATG10Q07879 167 aa0.05□□□□□ -2.4
TSC3YBR058C-A RPS22BQ3E7Y3 130 aaKnown RBP0.05□□□□□ -2.4
TSC3YBR058C-A RIB3Q99258 208 aa0.05□□□□□ -2.4
TSC3YBR058C-A YLR157W-EP0CF00 54 aa0.04□□□□□ -2.4
TSC3YBR058C-A YEL014CP39999 101 aa0.04□□□□□ -2.4
TSC3YBR058C-A CWC21Q03375 135 aaKnown RBP0.04□□□□□ -2.4
TSC3YBR058C-A SEN15Q04675 128 aa0.04□□□□□ -2.4
TSC3YBR058C-A LAA1P39526 2014 aa0.03□□□□□ -2.4
TSC3YBR058C-A HSP150P32478 413 aa0.03□□□□□ -2.4
TSC3YBR058C-A YET3Q07451 203 aa0.03□□□□□ -2.4
TSC3YBR058C-A UIP4Q08926 304 aa0.03□□□□□ -2.4
TSC3YBR058C-A CDC39P25655 2108 aaKnown RBP0.02□□□□□ -2.41
TSC3YBR058C-A UBC6P33296 250 aaPredicted RBP0.02□□□□□ -2.41
TSC3YBR058C-A YPT31P38555 223 aaKnown RBP0.02□□□□□ -2.41
TSC3YBR058C-A THI74Q04083 370 aa0.02□□□□□ -2.41
TSC3YBR058C-A GRE1Q08969 168 aa0.02□□□□□ -2.41
TSC3YBR058C-A ECM31P38122 312 aa0.01□□□□□ -2.41
TSC3YBR058C-A YNR064CP53750 290 aa0.01□□□□□ -2.41
TSC3YBR058C-A ADE6P38972 1358 aaKnown RBP0.01□□□□□ -2.41
TSC3YBR058C-A YHR140WP38842 239 aa0□□□□□ -2.41
TSC3YBR058C-A PEX11Q12462 236 aa0□□□□□ -2.41
TSC3YBR058C-A HYP2P23301 157 aaKnown RBP-0.01□□□□□ -2.41
TSC3YBR058C-A TRR1P29509 319 aaKnown RBP-0.01□□□□□ -2.41
TSC3YBR058C-A IPT1P38954 527 aa-0.01□□□□□ -2.41
TSC3YBR058C-A HSK3P69852 69 aa-0.01□□□□□ -2.41
TSC3YBR058C-A YDR102CQ03864 110 aa-0.01□□□□□ -2.41
TSC3YBR058C-A SPA2P23201 1466 aaKnown RBP-0.02□□□□□ -2.41
TSC3YBR058C-A SRP102P36057 244 aaPredicted RBP-0.02□□□□□ -2.41
TSC3YBR058C-A SNF2P22082 1703 aa-0.03□□□□□ -2.41
TSC3YBR058C-A RAD51P25454 400 aa-0.03□□□□□ -2.41
TSC3YBR058C-A ATP7P30902 174 aa-0.03□□□□□ -2.41
TSC3YBR058C-A DIE2P50076 525 aa-0.03□□□□□ -2.41
TSC3YBR058C-A NMA1Q06178 401 aaKnown RBP-0.03□□□□□ -2.41
TSC3YBR058C-A RPL33AP05744 107 aaKnown RBP-0.04□□□□□ -2.42
TSC3YBR058C-A MRS4P23500 304 aa-0.04□□□□□ -2.42
TSC3YBR058C-A YLR050CQ12155 161 aaKnown RBP-0.04□□□□□ -2.42
TSC3YBR058C-A GSC2P40989 1895 aa-0.04□□□□□ -2.42
TSC3YBR058C-A MVB12P42939 101 aa-0.05□□□□□ -2.42
TSC3YBR058C-A YIP3P53633 176 aa-0.05□□□□□ -2.42
TSC3YBR058C-A FMN1Q03778 218 aa-0.05□□□□□ -2.42
TSC3YBR058C-A YOR034C-AQ3E735 80 aa-0.05□□□□□ -2.42
TSC3YBR058C-A GRX3Q03835 250 aa-0.06□□□□□ -2.42
TSC3YBR058C-A ATP5P09457 212 aa-0.07□□□□□ -2.42
TSC3YBR058C-A PLP1Q04004 230 aa-0.07□□□□□ -2.42
TSC3YBR058C-A IRC19Q07843 230 aa-0.07□□□□□ -2.42
TSC3YBR058C-A BLM10P43583 2143 aa-0.07□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 61.1 ms