RNA–Protein interactions for RNA: YBL102W

SFT2, Transcript of Tetra-spanning membrane protein found mostly in the late Golgi, yeast

Gene SFT2, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SFT2	YBL102W	YOR192C-C	Q3E736	78 aa		4.12	□□□□□ -1.75
SFT2	YBL102W	CDC39	P25655	2108 aa	Known RBP	4.12	□□□□□ -1.75
SFT2	YBL102W	TDH1	P00360	332 aa	Known RBP	4.11	□□□□□ -1.75
SFT2	YBL102W	SEC59	P20048	519 aa		4.11	□□□□□ -1.75
SFT2	YBL102W	POP5	P28005	173 aa		4.11	□□□□□ -1.75
SFT2	YBL102W	IES6	P32617	166 aa		4.11	□□□□□ -1.75
SFT2	YBL102W	RAD23	P32628	398 aa	Known RBP	4.11	□□□□□ -1.75
SFT2	YBL102W	YGP1	P38616	354 aa	Known RBP	4.11	□□□□□ -1.75
SFT2	YBL102W	ECM14	P38836	430 aa		4.11	□□□□□ -1.75
SFT2	YBL102W	WSS1	P38838	269 aa		4.11	□□□□□ -1.75
SFT2	YBL102W	RIB4	P50861	169 aa	Predicted RBP	4.11	□□□□□ -1.75
SFT2	YBL102W	YGL114W	P53134	725 aa		4.11	□□□□□ -1.75
SFT2	YBL102W	TIM11	P81449	96 aa	Predicted RBP	4.11	□□□□□ -1.75
SFT2	YBL102W	ADD37	Q03233	198 aa		4.11	□□□□□ -1.75
SFT2	YBL102W	SME1	Q12330	94 aa	Predicted RBP	4.11	□□□□□ -1.75
SFT2	YBL102W	BOL1	Q3E793	110 aa		4.11	□□□□□ -1.75
SFT2	YBL102W	PCC1	Q3E833	88 aa		4.11	□□□□□ -1.75
SFT2	YBL102W	SEC16	P48415	2195 aa	Known RBP	4.1	□□□□□ -1.75
SFT2	YBL102W	RPL39	P04650	51 aa		4.1	□□□□□ -1.75
SFT2	YBL102W	ADH3	P07246	375 aa	Known RBP	4.1	□□□□□ -1.75
SFT2	YBL102W	RPS25B	P0C0T4	108 aa	Known RBP	4.1	□□□□□ -1.75
SFT2	YBL102W	URA5	P13298	226 aa	Known RBP	4.1	□□□□□ -1.75
SFT2	YBL102W	PHO85	P17157	305 aa		4.1	□□□□□ -1.75
SFT2	YBL102W	DAL80	P26343	269 aa		4.1	□□□□□ -1.75
SFT2	YBL102W	FPR2	P32472	135 aa		4.1	□□□□□ -1.75
SFT2	YBL102W	SHB17	P36136	271 aa	Known RBP	4.1	□□□□□ -1.75
SFT2	YBL102W	GPI18	P38211	433 aa		4.1	□□□□□ -1.75
SFT2	YBL102W	COX14	P39103	70 aa		4.1	□□□□□ -1.75
SFT2	YBL102W	NSA2	P40078	261 aa	Known RBP	4.1	□□□□□ -1.75
SFT2	YBL102W	YFL051C	P43552	160 aa		4.1	□□□□□ -1.75
SFT2	YBL102W	PIR5	P46999	287 aa		4.1	□□□□□ -1.75
SFT2	YBL102W	YGR050C	P53231	118 aa		4.1	□□□□□ -1.75
SFT2	YBL102W	SED1	Q01589	338 aa		4.1	□□□□□ -1.75
SFT2	YBL102W	YPS3	Q12303	508 aa		4.1	□□□□□ -1.75
SFT2	YBL102W	ATG5	Q12380	294 aa		4.1	□□□□□ -1.75
SFT2	YBL102W	RPS25A	Q3E792	108 aa	Predicted RBP	4.1	□□□□□ -1.75
SFT2	YBL102W	ADH2	P00331	348 aa	Known RBP	4.09	□□□□□ -1.75
SFT2	YBL102W	CDC7	P06243	507 aa		4.09	□□□□□ -1.75
SFT2	YBL102W	BGL2	P15703	313 aa	Known RBP	4.09	□□□□□ -1.75
SFT2	YBL102W	FCY2	P17064	533 aa		4.09	□□□□□ -1.75
SFT2	YBL102W	AGA2	P32781	87 aa		4.09	□□□□□ -1.75
SFT2	YBL102W	YKL075C	P36083	450 aa		4.09	□□□□□ -1.75
SFT2	YBL102W	DAD2	P36162	133 aa		4.09	□□□□□ -1.75
SFT2	YBL102W	COX15	P40086	486 aa		4.09	□□□□□ -1.75
SFT2	YBL102W	ARP3	P47117	449 aa	Known RBP	4.09	□□□□□ -1.75
SFT2	YBL102W	YJR085C	P47131	105 aa	Known RBP	4.09	□□□□□ -1.75
SFT2	YBL102W	PAU4	P53427	120 aa		4.09	□□□□□ -1.75
SFT2	YBL102W	EST3	Q03096	181 aa		4.09	□□□□□ -1.75
SFT2	YBL102W	ATC1	Q04005	294 aa		4.09	□□□□□ -1.75
SFT2	YBL102W	GAT3	Q07928	141 aa		4.09	□□□□□ -1.75
SFT2	YBL102W	RAD28	Q12021	506 aa		4.09	□□□□□ -1.75
SFT2	YBL102W	ATP16	Q12165	160 aa		4.09	□□□□□ -1.75
SFT2	YBL102W	YOR015W	Q12169	119 aa		4.09	□□□□□ -1.75
SFT2	YBL102W	COX19	Q3E731	98 aa		4.09	□□□□□ -1.75
SFT2	YBL102W	VMA9	Q3E7B6	73 aa		4.09	□□□□□ -1.75
SFT2	YBL102W	PAU1	P0CE88	120 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	PAU14	P0CE89	120 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	PAU6	P0CE90	120 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	PAU18	P0CE91	120 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	PAU8	P0CE92	120 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	PAU11	P0CE93	120 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	CNB1	P25296	175 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	TRS20	P38334	175 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	PAU13	P38725	120 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	RFC2	P40348	353 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	YJL118W	P47022	219 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	YGL262W	P53054	175 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	PAU10	Q03050	120 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	SDH7	Q04401	133 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	YOL118C	Q08259	102 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	PAU20	Q08322	120 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	PRR2	Q12310	699 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	YOP1	Q12402	180 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	PAU9	Q3E770	120 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	COA2	Q3E823	68 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	YMR105W-A	Q8TGS8	64 aa		4.08	□□□□□ -1.76
SFT2	YBL102W	HTB1	P02293	131 aa	Known RBP	4.07	□□□□□ -1.76
SFT2	YBL102W	NOP1	P15646	327 aa	Known RBP	4.07	□□□□□ -1.76
SFT2	YBL102W	RPB3	P16370	318 aa	Known RBP	4.07	□□□□□ -1.76
SFT2	YBL102W	SPO13	P23624	291 aa		4.07	□□□□□ -1.76
SFT2	YBL102W	ALK2	P32789	676 aa	Predicted RBP	4.07	□□□□□ -1.76
SFT2	YBL102W	HSP10	P38910	106 aa		4.07	□□□□□ -1.76
SFT2	YBL102W	MIC27	P50945	234 aa		4.07	□□□□□ -1.76
SFT2	YBL102W	TIM21	P53220	239 aa		4.07	□□□□□ -1.76
SFT2	YBL102W	YDR114C	Q04597	100 aa		4.07	□□□□□ -1.76
SFT2	YBL102W	NDE2	Q07500	545 aa		4.07	□□□□□ -1.76
SFT2	YBL102W	SNU23	Q12368	194 aa	Predicted RBP	4.07	□□□□□ -1.76
SFT2	YBL102W	RAX2	Q12465	1220 aa		4.07	□□□□□ -1.76
SFT2	YBL102W	SPS100	P13130	326 aa		4.06	□□□□□ -1.76
SFT2	YBL102W	TOM40	P23644	387 aa	Known RBP	4.06	□□□□□ -1.76
SFT2	YBL102W	CDC50	P25656	391 aa		4.06	□□□□□ -1.76
SFT2	YBL102W	HMX1	P32339	317 aa		4.06	□□□□□ -1.76
SFT2	YBL102W	SPS18	P32572	300 aa		4.06	□□□□□ -1.76
SFT2	YBL102W	CTR2	P38865	189 aa		4.06	□□□□□ -1.76
SFT2	YBL102W	IRC22	P40006	225 aa		4.06	□□□□□ -1.76
SFT2	YBL102W	LCB3	P47013	409 aa		4.06	□□□□□ -1.76
SFT2	YBL102W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
SFT2	YBL102W	API2	Q04413	109 aa		4.06	□□□□□ -1.76
SFT2	YBL102W	ADH6	Q04894	360 aa	Known RBP	4.06	□□□□□ -1.76
SFT2	YBL102W	LDS2	Q08218	356 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 111 ms