RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAR009CYAR009C SEC22P22214 214 aa0.71□□□□□ -2.3
YAR009CYAR009C PPA2P28239 310 aa0.71□□□□□ -2.3
YAR009CYAR009C RIB7P33312 244 aa0.71□□□□□ -2.3
YAR009CYAR009C YKR045CP36138 183 aa0.71□□□□□ -2.3
YAR009CYAR009C COS8P38723 381 aa0.71□□□□□ -2.3
YAR009CYAR009C SMB1P40018 196 aaKnown RBP0.71□□□□□ -2.3
YAR009CYAR009C SNX4P47057 423 aa0.71□□□□□ -2.3
YAR009CYAR009C TDA4P47153 279 aa0.71□□□□□ -2.3
YAR009CYAR009C YLR173WQ06247 608 aa0.71□□□□□ -2.3
YAR009CYAR009C PUT1P09368 476 aa0.7□□□□□ -2.3
YAR009CYAR009C ATP7P30902 174 aa0.7□□□□□ -2.3
YAR009CYAR009C YAR068WP39564 161 aa0.7□□□□□ -2.3
YAR009CYAR009C BMT5P40493 336 aa0.7□□□□□ -2.3
YAR009CYAR009C MRH4P53166 561 aa0.7□□□□□ -2.3
YAR009CYAR009C YNR064CP53750 290 aa0.7□□□□□ -2.3
YAR009CYAR009C YDR102CQ03864 110 aa0.7□□□□□ -2.3
YAR009CYAR009C SYC1Q08553 188 aaPredicted RBP0.7□□□□□ -2.3
YAR009CYAR009C YHR086W-AQ3E746 53 aa0.7□□□□□ -2.3
YAR009CYAR009C MHF2Q3E829 80 aa0.7□□□□□ -2.3
YAR009CYAR009C URA6P15700 204 aa0.7□□□□□ -2.3
YAR009CYAR009C YUH1P35127 236 aa0.7□□□□□ -2.3
YAR009CYAR009C UTP30P36144 274 aaKnown RBP0.7□□□□□ -2.3
YAR009CYAR009C VMA22P38784 181 aa0.7□□□□□ -2.3
YAR009CYAR009C AIM2P39721 246 aa0.7□□□□□ -2.3
YAR009CYAR009C COX15P40086 486 aa0.7□□□□□ -2.3
YAR009CYAR009C YNL200CP40165 246 aaKnown RBP0.7□□□□□ -2.3
YAR009CYAR009C ARC15P40518 154 aaRIP-Chip data0.7□□□□□ -2.3not detected
YAR009CYAR009C YGL159WP53110 370 aa0.7□□□□□ -2.3
YAR009CYAR009C YGR017WP53210 297 aa0.7□□□□□ -2.3
YAR009CYAR009C YLR179CQ06252 201 aaKnown RBP0.7□□□□□ -2.3
YAR009CYAR009C YLR365WQ7LIF2 110 aa0.7□□□□□ -2.3
YAR009CYAR009C TIM9O74700 87 aa0.7□□□□□ -2.3
YAR009CYAR009C MRPL25P23369 157 aa0.7□□□□□ -2.3
YAR009CYAR009C RNA15P25299 296 aaPredicted RBP0.7□□□□□ -2.3
YAR009CYAR009C HOM6P31116 359 aaKnown RBP0.7□□□□□ -2.3
YAR009CYAR009C YHR180WP38868 163 aa0.7□□□□□ -2.3
YAR009CYAR009C IMP2P46972 177 aa0.7□□□□□ -2.3
YAR009CYAR009C YGL034CP53186 121 aa0.7□□□□□ -2.3
YAR009CYAR009C NQM1P53228 333 aaPredicted RBP0.7□□□□□ -2.3
YAR009CYAR009C GPI17Q04080 534 aa0.7□□□□□ -2.3
YAR009CYAR009C GAL83Q04739 417 aa0.7□□□□□ -2.3
YAR009CYAR009C SDO1Q07953 250 aaKnown RBP0.7□□□□□ -2.3
YAR009CYAR009C TAR1Q8TGM6 124 aa0.7□□□□□ -2.3
YAR009CYAR009C RPL30P14120 105 aaKnown RBP0.69□□□□□ -2.3
YAR009CYAR009C DOA4P32571 926 aa0.69□□□□□ -2.3
YAR009CYAR009C LHP1P33399 275 aaKnown RBP0.69□□□□□ -2.3
YAR009CYAR009C BIG1P38813 335 aa0.69□□□□□ -2.3
YAR009CYAR009C THO1P40040 218 aaKnown RBP0.69□□□□□ -2.3
YAR009CYAR009C GLE2P40066 365 aa0.69□□□□□ -2.3
YAR009CYAR009C PDS1P40316 373 aaPredicted RBP0.69□□□□□ -2.3
YAR009CYAR009C USE1P53146 245 aa0.69□□□□□ -2.3
YAR009CYAR009C CTF19Q02732 369 aa0.69□□□□□ -2.3
YAR009CYAR009C HRD1Q08109 551 aa0.69□□□□□ -2.3
YAR009CYAR009C YGR240C-AQ3E786 66 aa0.69□□□□□ -2.3
YAR009CYAR009C CMC4Q3E7A9 73 aa0.69□□□□□ -2.3
YAR009CYAR009C RPS11AP0CX47 156 aaKnown RBP0.69□□□□□ -2.3
YAR009CYAR009C RPS11BP0CX48 156 aaKnown RBP0.69□□□□□ -2.3
YAR009CYAR009C MER1P16523 270 aa0.69□□□□□ -2.3
YAR009CYAR009C SRY1P36007 326 aa0.69□□□□□ -2.3
YAR009CYAR009C MRPL17P36528 281 aa0.69□□□□□ -2.3
YAR009CYAR009C GAT4P40569 121 aa0.69□□□□□ -2.3
YAR009CYAR009C PAU12P53343 120 aa0.69□□□□□ -2.3
YAR009CYAR009C FAR8Q05040 523 aa0.69□□□□□ -2.3
YAR009CYAR009C SNU23Q12368 194 aaPredicted RBP0.69□□□□□ -2.3
YAR009CYAR009C Q0255P03881 472 aa0.68□□□□□ -2.3
YAR009CYAR009C YHR032W-AP0C5N6 59 aa0.68□□□□□ -2.3
YAR009CYAR009C TFC1P32367 649 aa0.68□□□□□ -2.3
YAR009CYAR009C MRP49P32388 137 aa0.68□□□□□ -2.3
YAR009CYAR009C SRP102P36057 244 aaPredicted RBP0.68□□□□□ -2.3
YAR009CYAR009C MSA2P36157 363 aa0.68□□□□□ -2.3
YAR009CYAR009C GOS1P38736 223 aa0.68□□□□□ -2.3
YAR009CYAR009C YHR125WP38831 101 aa0.68□□□□□ -2.3
YAR009CYAR009C FCY21P40039 528 aa0.68□□□□□ -2.3
YAR009CYAR009C LSM1P47017 172 aaKnown RBP0.68□□□□□ -2.3
YAR009CYAR009C GET1P53192 235 aa0.68□□□□□ -2.3
YAR009CYAR009C YGR026WP53217 278 aa0.68□□□□□ -2.3
YAR009CYAR009C SAY1P53324 424 aa0.68□□□□□ -2.3
YAR009CYAR009C DIG2Q03373 323 aaKnown RBP0.68□□□□□ -2.3
YAR009CYAR009C YNG1Q08465 219 aa0.68□□□□□ -2.3
YAR009CYAR009C YOR186WQ08560 144 aa0.68□□□□□ -2.3
YAR009CYAR009C YCT1Q12235 531 aa0.68□□□□□ -2.3
YAR009CYAR009C SEN2P16658 377 aa0.68□□□□□ -2.3
YAR009CYAR009C HTD2P38790 280 aaKnown RBP0.68□□□□□ -2.3
YAR009CYAR009C CWC23P52868 283 aaPredicted RBP0.68□□□□□ -2.3
YAR009CYAR009C CUS2P53830 285 aaPredicted RBP0.68□□□□□ -2.3
YAR009CYAR009C FYV6P53913 173 aa0.68□□□□□ -2.3
YAR009CYAR009C NOC4Q06512 552 aaPredicted RBP0.68□□□□□ -2.3
YAR009CYAR009C HEM25Q07534 307 aa0.68□□□□□ -2.3
YAR009CYAR009C CSM4Q08955 156 aa0.68□□□□□ -2.3
YAR009CYAR009C YPL162CQ12042 273 aa0.68□□□□□ -2.3
YAR009CYAR009C VAR1P02381 398 aa0.68□□□□□ -2.3
YAR009CYAR009C ADH3P07246 375 aaKnown RBP0.68□□□□□ -2.3
YAR009CYAR009C ERG24P32462 438 aaKnown RBP0.68□□□□□ -2.3
YAR009CYAR009C IKI1P38874 309 aa0.68□□□□□ -2.3
YAR009CYAR009C YOR385WQ08909 290 aa0.68□□□□□ -2.3
YAR009CYAR009C RPL39P04650 51 aa0.67□□□□□ -2.3
YAR009CYAR009C BFR1P38934 470 aaKnown RBP RIP-Chip data0.67□□□□□ -2.3not detected
YAR009CYAR009C MRPL50P53724 139 aa0.67□□□□□ -2.3
YAR009CYAR009C DML1Q03652 475 aa0.67□□□□□ -2.3
YAR009CYAR009C YPL257WQ08974 193 aa0.67□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 161.1 ms