RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C YKR073CP36153 106 aa3.43□□□□□ -1.86
PTA1YAL043C YBR184WP38299 523 aa3.43□□□□□ -1.86
PTA1YAL043C YPT31P38555 223 aaKnown RBP3.43□□□□□ -1.86
PTA1YAL043C COX15P40086 486 aa3.43□□□□□ -1.86
PTA1YAL043C XBP1P40489 647 aa3.43□□□□□ -1.86
PTA1YAL043C SMD3P43321 101 aaKnown RBP3.43□□□□□ -1.86
PTA1YAL043C ARP3P47117 449 aaKnown RBP3.43□□□□□ -1.86
PTA1YAL043C RPL21AQ02753 160 aaKnown RBP3.43□□□□□ -1.86
PTA1YAL043C YDR391CQ04170 232 aa3.43□□□□□ -1.86
PTA1YAL043C LOA1Q06508 300 aa3.43□□□□□ -1.86
PTA1YAL043C YPL264CQ08980 353 aa3.43□□□□□ -1.86
PTA1YAL043C RPL21BQ12672 160 aaKnown RBP3.43□□□□□ -1.86
PTA1YAL043C FOL3Q12676 427 aaPredicted RBP3.43□□□□□ -1.86
PTA1YAL043C YOR304C-AO14468 76 aa3.42□□□□□ -1.86
PTA1YAL043C ADH2P00331 348 aaKnown RBP3.42□□□□□ -1.86
PTA1YAL043C YPT1P01123 206 aaKnown RBP3.42□□□□□ -1.86
PTA1YAL043C YBL059WP34224 193 aa3.42□□□□□ -1.86
PTA1YAL043C PSD1P39006 500 aa3.42□□□□□ -1.86
PTA1YAL043C YEL057CP39983 233 aa3.42□□□□□ -1.86
PTA1YAL043C SBH2P52871 88 aa3.42□□□□□ -1.86
PTA1YAL043C ERG25P53045 309 aa3.42□□□□□ -1.86
PTA1YAL043C YMR254CQ04838 102 aa3.42□□□□□ -1.86
PTA1YAL043C YOR292CQ08743 309 aa3.42□□□□□ -1.86
PTA1YAL043C POM33Q12164 279 aa3.42□□□□□ -1.86
PTA1YAL043C YOR029WQ12243 111 aa3.42□□□□□ -1.86
PTA1YAL043C RPL39P04650 51 aa3.41□□□□□ -1.86
PTA1YAL043C DDI2P0CH63 225 aa3.41□□□□□ -1.86
PTA1YAL043C DDI3P0CH64 225 aa3.41□□□□□ -1.86
PTA1YAL043C DAL82P21705 255 aa3.41□□□□□ -1.86
PTA1YAL043C PRE1P22141 198 aaKnown RBP3.41□□□□□ -1.86
PTA1YAL043C IRC22P40006 225 aa3.41□□□□□ -1.86
PTA1YAL043C YFL015CP43578 164 aa3.41□□□□□ -1.86
PTA1YAL043C RIB4P50861 169 aaPredicted RBP3.41□□□□□ -1.86
PTA1YAL043C PCP1P53259 346 aa3.41□□□□□ -1.86
PTA1YAL043C YPL067CQ02754 198 aa3.41□□□□□ -1.86
PTA1YAL043C YDR209CQ03480 137 aa3.41□□□□□ -1.86
PTA1YAL043C TVP18Q04767 167 aa3.41□□□□□ -1.86
PTA1YAL043C STP4Q07351 490 aa3.41□□□□□ -1.86
PTA1YAL043C ATX2Q12067 313 aa3.41□□□□□ -1.86
PTA1YAL043C PAU19P0CE85 124 aa3.41□□□□□ -1.86
PTA1YAL043C PAU21P0CE86 164 aa3.41□□□□□ -1.86
PTA1YAL043C PAU22P0CE87 164 aa3.41□□□□□ -1.86
PTA1YAL043C PAU3P25610 124 aa3.41□□□□□ -1.86
PTA1YAL043C YGP1P38616 354 aaKnown RBP3.41□□□□□ -1.86
PTA1YAL043C YER134CP40081 178 aa3.41□□□□□ -1.86
PTA1YAL043C GAT2P40209 560 aa3.41□□□□□ -1.86
PTA1YAL043C SHH3Q04487 196 aa3.41□□□□□ -1.86
PTA1YAL043C SMT3Q12306 101 aaKnown RBP3.41□□□□□ -1.86
PTA1YAL043C AVT5P38176 459 aa3.4□□□□□ -1.86
PTA1YAL043C SEC24P40482 926 aaKnown RBP3.4□□□□□ -1.86
PTA1YAL043C GON7P46984 123 aa3.4□□□□□ -1.86
PTA1YAL043C TOM7P53507 60 aa3.4□□□□□ -1.86
PTA1YAL043C YNR071CP53757 342 aa3.4□□□□□ -1.86
PTA1YAL043C HHT1P61830 136 aa3.4□□□□□ -1.86
PTA1YAL043C APS2Q00381 147 aa3.4□□□□□ -1.86
PTA1YAL043C YLR118CQ12354 227 aa3.4□□□□□ -1.86
PTA1YAL043C QCR9P22289 66 aa3.4□□□□□ -1.87
PTA1YAL043C CTR2P38865 189 aa3.4□□□□□ -1.87
PTA1YAL043C SRP14P38985 146 aa3.4□□□□□ -1.87
PTA1YAL043C ERG28P40030 148 aa3.4□□□□□ -1.87
PTA1YAL043C CCS1P40202 249 aaKnown RBP3.4□□□□□ -1.87
PTA1YAL043C IZH3Q07959 543 aa3.4□□□□□ -1.87
PTA1YAL043C HRD1Q08109 551 aa3.4□□□□□ -1.87
PTA1YAL043C NOP1P15646 327 aaKnown RBP3.39□□□□□ -1.87
PTA1YAL043C ATP10P18496 279 aa3.39□□□□□ -1.87
PTA1YAL043C GLC8P41818 229 aa3.39□□□□□ -1.87
PTA1YAL043C PIR5P46999 287 aa3.39□□□□□ -1.87
PTA1YAL043C BNA2P47125 453 aa3.39□□□□□ -1.87
PTA1YAL043C SDS23P53172 527 aa3.39□□□□□ -1.87
PTA1YAL043C YNL184CP53876 108 aa3.39□□□□□ -1.87
PTA1YAL043C YMR166CQ03829 368 aa3.39□□□□□ -1.87
PTA1YAL043C LPP1Q04396 274 aa3.39□□□□□ -1.87
PTA1YAL043C YOL029CQ08187 201 aa3.39□□□□□ -1.87
PTA1YAL043C YOR105WQ08504 108 aa3.39□□□□□ -1.87
PTA1YAL043C ROX3P25046 220 aa3.39□□□□□ -1.87
PTA1YAL043C YHR138CP38841 114 aaPredicted RBP3.39□□□□□ -1.87
PTA1YAL043C CDC40P40968 455 aaPredicted RBP3.39□□□□□ -1.87
PTA1YAL043C TDA4P47153 279 aa3.39□□□□□ -1.87
PTA1YAL043C SIP18P50263 79 aa3.39□□□□□ -1.87
PTA1YAL043C MIC27P50945 234 aa3.39□□□□□ -1.87
PTA1YAL043C RAV2Q03956 351 aa3.39□□□□□ -1.87
PTA1YAL043C YLR179CQ06252 201 aaKnown RBP3.39□□□□□ -1.87
PTA1YAL043C YCR024C-BQ3E7Z8 88 aa3.39□□□□□ -1.87
PTA1YAL043C SOD1P00445 154 aaKnown RBP3.38□□□□□ -1.87
PTA1YAL043C RPL7AP05737 244 aaKnown RBP3.38□□□□□ -1.87
PTA1YAL043C SEC4P07560 215 aaKnown RBP3.38□□□□□ -1.87
PTA1YAL043C HEM13P11353 328 aaKnown RBP3.38□□□□□ -1.87
PTA1YAL043C MAK32P23060 363 aa3.38□□□□□ -1.87
PTA1YAL043C UGX2P32772 223 aa3.38□□□□□ -1.87
PTA1YAL043C DUT1P33317 147 aa3.38□□□□□ -1.87
PTA1YAL043C EGT2P42835 1041 aa3.38□□□□□ -1.87
PTA1YAL043C YJR096WP47137 282 aa3.38□□□□□ -1.87
PTA1YAL043C DPP1Q05521 289 aa3.38□□□□□ -1.87
PTA1YAL043C YOL024WQ08172 172 aa3.38□□□□□ -1.87
PTA1YAL043C RKI1Q12189 258 aa3.38□□□□□ -1.87
PTA1YAL043C RPL7BQ12213 244 aaKnown RBP3.38□□□□□ -1.87
PTA1YAL043C YIR021W-AQ3E739 70 aa3.38□□□□□ -1.87
PTA1YAL043C RPL9AP05738 191 aaKnown RBP3.38□□□□□ -1.87
PTA1YAL043C YKL075CP36083 450 aa3.38□□□□□ -1.87
PTA1YAL043C MRPL39P36533 70 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms