RNA–Protein interactions for RNA: RDN18-2

RDN18-2, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-2, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-2RDN18-2 ACP1P32463 125 aa8.38□□□□□ -1.07
RDN18-2RDN18-2 YKR045CP36138 183 aa8.38□□□□□ -1.07
RDN18-2RDN18-2 ADH5P38113 351 aaKnown RBP8.38□□□□□ -1.07
RDN18-2RDN18-2 YER121WP40076 114 aa8.38□□□□□ -1.07
RDN18-2RDN18-2 DCN1Q12395 269 aa8.38□□□□□ -1.07
RDN18-2RDN18-2 RAD23P32628 398 aaKnown RBP8.38□□□□□ -1.07
RDN18-2RDN18-2 DAD2P36162 133 aa8.38□□□□□ -1.07
RDN18-2RDN18-2 CYB5P40312 120 aa8.38□□□□□ -1.07
RDN18-2RDN18-2 SSU72P53538 206 aaPredicted RBP8.38□□□□□ -1.07
RDN18-2RDN18-2 YCL048W-AQ2V2Q2 79 aa8.38□□□□□ -1.07
RDN18-2RDN18-2 SRP21P32342 167 aa8.37□□□□□ -1.07
RDN18-2RDN18-2 PMU1P36069 295 aa8.37□□□□□ -1.07
RDN18-2RDN18-2 SGN1P40561 250 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
RDN18-2RDN18-2 YOR352WQ08816 343 aa8.37□□□□□ -1.07
RDN18-2RDN18-2 YDL009CQ12210 107 aa8.37□□□□□ -1.07
RDN18-2RDN18-2 PAA1Q12447 191 aaKnown RBP8.37□□□□□ -1.07
RDN18-2RDN18-2 TMA17Q12513 150 aa8.37□□□□□ -1.07
RDN18-2RDN18-2 LSO2Q3E772 92 aaKnown RBP8.37□□□□□ -1.07
RDN18-2RDN18-2 SAS2P40963 338 aa8.36□□□□□ -1.07
RDN18-2RDN18-2 CPD1P53314 239 aa8.36□□□□□ -1.07
RDN18-2RDN18-2 POR1P04840 283 aaKnown RBP8.36□□□□□ -1.07
RDN18-2RDN18-2 DFR1P07807 211 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
RDN18-2RDN18-2 SPS100P13130 326 aa8.36□□□□□ -1.07
RDN18-2RDN18-2 PRE9P23638 258 aaKnown RBP8.36□□□□□ -1.07
RDN18-2RDN18-2 YCR022CP25620 114 aa8.36□□□□□ -1.07
RDN18-2RDN18-2 FPR2P32472 135 aa8.36□□□□□ -1.07
RDN18-2RDN18-2 TIF11P38912 153 aaKnown RBP8.36□□□□□ -1.07
RDN18-2RDN18-2 HUA1P40325 198 aa8.36□□□□□ -1.07
RDN18-2RDN18-2 LST8P41318 303 aa8.36□□□□□ -1.07
RDN18-2RDN18-2 YGR018CP53211 109 aa8.36□□□□□ -1.07
RDN18-2RDN18-2 YNL234WP53857 426 aa8.36□□□□□ -1.07
RDN18-2RDN18-2 SMT3Q12306 101 aaKnown RBP8.36□□□□□ -1.07
RDN18-2RDN18-2 ATO3Q12359 275 aa8.36□□□□□ -1.07
RDN18-2RDN18-2 YKL187CP34231 750 aa8.35□□□□□ -1.07
RDN18-2RDN18-2 CSH1P38287 376 aa8.35□□□□□ -1.07
RDN18-2RDN18-2 BDH1P39714 382 aa8.35□□□□□ -1.07
RDN18-2RDN18-2 LSM4P40070 187 aaKnown RBP8.35□□□□□ -1.07
RDN18-2RDN18-2 MIX17Q03667 156 aa8.35□□□□□ -1.07
RDN18-2RDN18-2 NDE2Q07500 545 aa8.35□□□□□ -1.07
RDN18-2RDN18-2 YNR034W-AQ3E841 98 aa8.35□□□□□ -1.07
RDN18-2RDN18-2 YIL134C-AQ45U18 67 aa8.35□□□□□ -1.07
RDN18-2RDN18-2 PRP8P33334 2413 aaKnown RBP8.35□□□□□ -1.07
RDN18-2RDN18-2 NNK1P36003 928 aa8.34□□□□□ -1.07
RDN18-2RDN18-2 IRC22P40006 225 aa8.34□□□□□ -1.07
RDN18-2RDN18-2 YJL213WP40896 331 aa8.34□□□□□ -1.07
RDN18-2RDN18-2 OST3P48439 350 aa8.34□□□□□ -1.07
RDN18-2RDN18-2 YNR064CP53750 290 aa8.34□□□□□ -1.07
RDN18-2RDN18-2 OCA2P53949 197 aa8.34□□□□□ -1.07
RDN18-2RDN18-2 YLR302CO13544 120 aa8.33□□□□□ -1.08
RDN18-2RDN18-2 ERV14P53173 138 aa8.33□□□□□ -1.08
RDN18-2RDN18-2 YOR105WQ08504 108 aa8.33□□□□□ -1.08
RDN18-2RDN18-2 SUA7P29055 345 aaPredicted RBP8.33□□□□□ -1.08
RDN18-2RDN18-2 PAM17P36147 197 aa8.33□□□□□ -1.08
RDN18-2RDN18-2 YBL071CP38185 102 aa8.33□□□□□ -1.08
RDN18-2RDN18-2 LSM2P38203 95 aaKnown RBP8.33□□□□□ -1.08
RDN18-2RDN18-2 RAV2Q03956 351 aa8.33□□□□□ -1.08
RDN18-2RDN18-2 MCH1Q07376 486 aa8.33□□□□□ -1.08
RDN18-2RDN18-2 FIT2Q08906 153 aa8.33□□□□□ -1.08
RDN18-2RDN18-2 DOG2P38773 246 aa8.32□□□□□ -1.08
RDN18-2RDN18-2 DOG1P38774 246 aa8.32□□□□□ -1.08
RDN18-2RDN18-2 YMR166CQ03829 368 aa8.32□□□□□ -1.08
RDN18-2RDN18-2 SCM4P32564 187 aa8.31□□□□□ -1.08
RDN18-2RDN18-2 MTR2P34232 184 aaKnown RBP8.31□□□□□ -1.08
RDN18-2RDN18-2 STD1Q02794 444 aa8.31□□□□□ -1.08
RDN18-2RDN18-2 ARR2Q06597 130 aa8.31□□□□□ -1.08
RDN18-2RDN18-2 CUP2P15315 225 aa8.31□□□□□ -1.08
RDN18-2RDN18-2 HSP12P22943 109 aaKnown RBP8.31□□□□□ -1.08
RDN18-2RDN18-2 YHR173CP38864 112 aa8.31□□□□□ -1.08
RDN18-2RDN18-2 YGR151CP53287 111 aa8.31□□□□□ -1.08
RDN18-2RDN18-2 TOM7P53507 60 aa8.31□□□□□ -1.08
RDN18-2RDN18-2 FCY1Q12178 158 aa8.31□□□□□ -1.08
RDN18-2RDN18-2 YCL001W-BQ96VH2 84 aa8.31□□□□□ -1.08
RDN18-2RDN18-2 ERG27Q12452 347 aaKnown RBP8.3□□□□□ -1.08
RDN18-2RDN18-2 BPH1P25356 2167 aa8.3□□□□□ -1.08
RDN18-2RDN18-2 ADE8P04161 214 aa8.29□□□□□ -1.08
RDN18-2RDN18-2 IES6P32617 166 aa8.29□□□□□ -1.08
RDN18-2RDN18-2 SFT2P38166 215 aa8.29□□□□□ -1.08
RDN18-2RDN18-2 GPI18P38211 433 aa8.29□□□□□ -1.08
RDN18-2RDN18-2 QRI5P32344 111 aa8.29□□□□□ -1.08
RDN18-2RDN18-2 YKL075CP36083 450 aa8.29□□□□□ -1.08
RDN18-2RDN18-2 GAT2P40209 560 aa8.29□□□□□ -1.08
RDN18-2RDN18-2 YGR045CP53229 120 aa8.29□□□□□ -1.08
RDN18-2RDN18-2 IRC25Q07951 179 aa8.29□□□□□ -1.08
RDN18-2RDN18-2 YCR024C-BQ3E7Z8 88 aa8.29□□□□□ -1.08
RDN18-2RDN18-2 MRPL11P36521 249 aaPredicted RBP8.28□□□□□ -1.08
RDN18-2RDN18-2 ICS2P38284 255 aa8.28□□□□□ -1.08
RDN18-2RDN18-2 YNR071CP53757 342 aa8.28□□□□□ -1.08
RDN18-2RDN18-2 RXT3Q07458 294 aa8.28□□□□□ -1.08
RDN18-2RDN18-2 COA6Q3E846 104 aa8.28□□□□□ -1.08
RDN18-2RDN18-2 MIX23P38162 196 aa8.27□□□□□ -1.09
RDN18-2RDN18-2 AYT1Q12226 474 aa8.27□□□□□ -1.09
RDN18-2RDN18-2 JID1Q12350 301 aa8.27□□□□□ -1.09
RDN18-2RDN18-2 HST4P53688 370 aa8.26□□□□□ -1.09
RDN18-2RDN18-2 ATP19P81451 68 aa8.26□□□□□ -1.09
RDN18-2RDN18-2 IZH1Q03419 316 aa8.26□□□□□ -1.09
RDN18-2RDN18-2 FZF1P32805 299 aa8.26□□□□□ -1.09
RDN18-2RDN18-2 TMA10Q06177 86 aa8.26□□□□□ -1.09
RDN18-2RDN18-2 IRC23Q08416 157 aa8.26□□□□□ -1.09
RDN18-2RDN18-2 TMC1Q08422 150 aaPredicted RBP8.26□□□□□ -1.09
RDN18-2RDN18-2 ILV5P06168 395 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms