RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 DPH5Q9H2P9 285 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 IP6K2Q9UHH9 426 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 MTUS1Q9ULD2 1270 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 BARX2Q9UMQ3 279 aaPredicted RBP11.43□□□□□ -0.58
TARDBP-230ENST00000639083 DERAQ9Y315 318 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 SNX9Q9Y5X1 595 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 TRIP12Q14669 1992 aaPredicted RBP11.42□□□□□ -0.58
TARDBP-230ENST00000639083 GOLGA6BA6NDN3 693 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 TMEM88BA6NKF7 163 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 F8VP50 259 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 FSCN2O14926 492 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 MICAL2O94851 1124 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 STAU1O95793 577 aaKnown RBP11.42□□□□□ -0.58
TARDBP-230ENST00000639083 CHRNA3P32297 505 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 GJA9P57773 515 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 CAP1Q01518 475 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 OGDHQ02218 1023 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 PRKCZQ05513 592 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 ZNF252P-AS1Q0IIN9 211 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 INCA1Q0VD86 236 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 NBPF20Q3BBV1 942 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 PPP1R15BQ5SWA1 713 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 CCDC137Q6PK04 289 aaKnown RBP11.42□□□□□ -0.58
TARDBP-230ENST00000639083 EIF1ADQ8N9N8 165 aaKnown RBP11.42□□□□□ -0.58
TARDBP-230ENST00000639083 SEC14L1Q92503 715 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 CPXM1Q96SM3 734 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 HERPUD2Q9BSE4 406 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 CNTN3Q9P232 1028 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 PARP2Q9UGN5 583 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 GOLGA8SH3BPF8 625 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 VDRP11473 427 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 TCF4P15884 667 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 GJC1P36383 396 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 PTGIRP43119 386 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 KCNJ1P48048 391 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 DHX34Q14147 1143 aaKnown RBP11.42□□□□□ -0.58
TARDBP-230ENST00000639083 CNGA2Q16280 664 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 ATP13A4Q4VNC1 1196 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 UBXN11Q5T124 520 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 JAMLQ86YT9 394 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 C12orf29Q8N999 325 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 C3orf20Q8ND61 904 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 BEST2Q8NFU1 509 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 ERP44Q9BS26 406 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 MTG1Q9BT17 334 aaPredicted RBP11.42□□□□□ -0.58
TARDBP-230ENST00000639083 HEMGNQ9BXL5 484 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 PCYOX1Q9UHG3 505 aa11.42□□□□□ -0.58
TARDBP-230ENST00000639083 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.42□□□□□ -0.58
TARDBP-230ENST00000639083 SMIM28A0A1B0GU29 152 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 M0QYV0 167 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 PSTPIP1O43586 416 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 KPNA6O60684 536 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 MYCNP04198 464 aaPredicted RBP11.41□□□□□ -0.58
TARDBP-230ENST00000639083 RFC1P35251 1148 aaPredicted RBP11.41□□□□□ -0.58
TARDBP-230ENST00000639083 GPD2P43304 727 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 GABPB1Q06547 395 aaPredicted RBP11.41□□□□□ -0.58
TARDBP-230ENST00000639083 CACNB2Q08289 660 aaPredicted RBP11.41□□□□□ -0.58
TARDBP-230ENST00000639083 TERF2Q15554 542 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 CYP1B1Q16678 543 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 SGO2Q562F6 1265 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 DUPD1Q68J44 220 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 TAF2Q6P1X5 1199 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 CCDC50Q8IVM0 306 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 CCDC105Q8IYK2 499 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 UBA3Q8TBC4 463 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 C1orf54Q8WWF1 131 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.41□□□□□ -0.58
TARDBP-230ENST00000639083 MRPL45Q9BRJ2 306 aaKnown RBP11.41□□□□□ -0.58
TARDBP-230ENST00000639083 NT5C1AQ9BXI3 368 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 RAB17Q9H0T7 212 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 SYNCQ9H7C4 482 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 GPBP1L1Q9HC44 474 aaPredicted RBP11.41□□□□□ -0.58
TARDBP-230ENST00000639083 MED4Q9NPJ6 270 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.41□□□□□ -0.58
TARDBP-230ENST00000639083 VPS18Q9P253 973 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 GTF2IRD1Q9UHL9 959 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 STRIP2Q9ULQ0 834 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 FAN1Q9Y2M0 1017 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 CITO14578 2027 aa11.41□□□□□ -0.58
TARDBP-230ENST00000639083 FAM187AA6NFU0 413 aa11.4□□□□□ -0.58
TARDBP-230ENST00000639083 SEPT4O43236 478 aa11.4□□□□□ -0.58
TARDBP-230ENST00000639083 HMGCRP04035 888 aa11.4□□□□□ -0.58
TARDBP-230ENST00000639083 ERBB2P04626 1255 aa11.4□□□□□ -0.58
TARDBP-230ENST00000639083 RALAP11233 206 aa11.4□□□□□ -0.58
TARDBP-230ENST00000639083 KRT3P12035 628 aa11.4□□□□□ -0.58
TARDBP-230ENST00000639083 CYP3A5P20815 502 aa11.4□□□□□ -0.58
TARDBP-230ENST00000639083 MAN1A1P33908 653 aa11.4□□□□□ -0.58
TARDBP-230ENST00000639083 FLT3P36888 993 aa11.4□□□□□ -0.58
TARDBP-230ENST00000639083 COILP38432 576 aaPredicted RBP11.4□□□□□ -0.58
TARDBP-230ENST00000639083 PSMC1P62191 440 aaKnown RBP11.4□□□□□ -0.58
TARDBP-230ENST00000639083 C9orf57Q5W0N0 161 aa11.4□□□□□ -0.58
TARDBP-230ENST00000639083 GDF6Q6KF10 455 aaPredicted RBP11.4□□□□□ -0.58
TARDBP-230ENST00000639083 ARRDC4Q8NCT1 418 aa11.4□□□□□ -0.58
TARDBP-230ENST00000639083 FAM71BQ8TC56 605 aa11.4□□□□□ -0.58
TARDBP-230ENST00000639083 HHIPL1Q96JK4 782 aa11.4□□□□□ -0.58
TARDBP-230ENST00000639083 SPC25Q9HBM1 224 aa11.4□□□□□ -0.58
TARDBP-230ENST00000639083 FAM114A2Q9NRY5 505 aa11.4□□□□□ -0.58
TARDBP-230ENST00000639083 UBQLN1Q9UMX0 589 aaKnown RBP11.4□□□□□ -0.58
TARDBP-230ENST00000639083 PTPN22Q9Y2R2 807 aa11.4□□□□□ -0.58
TARDBP-230ENST00000639083 IPPQ9Y573 584 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms