RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 A0A0B4J269 797 aa5.92□□□□□ -1.46
USP8-218ENST00000561330 F5H697 171 aa5.92□□□□□ -1.46
USP8-218ENST00000561330 THP07101 528 aa5.92□□□□□ -1.46
USP8-218ENST00000561330 GRPP07492 148 aa5.92□□□□□ -1.46
USP8-218ENST00000561330 KITP10721 976 aa5.92□□□□□ -1.46
USP8-218ENST00000561330 NPR1P16066 1061 aa5.92□□□□□ -1.46
USP8-218ENST00000561330 ITGALP20701 1170 aa5.92□□□□□ -1.46
USP8-218ENST00000561330 NDUFV1P49821 464 aa5.92□□□□□ -1.46
USP8-218ENST00000561330 SEC24CP53992 1094 aa5.92□□□□□ -1.46
USP8-218ENST00000561330 TUBB3Q13509 450 aa5.92□□□□□ -1.46
USP8-218ENST00000561330 SF3B3Q15393 1217 aaKnown RBP5.92□□□□□ -1.46
USP8-218ENST00000561330 CNN3Q15417 329 aaKnown RBP5.92□□□□□ -1.46
USP8-218ENST00000561330 PPP4R4Q6NUP7 873 aa5.92□□□□□ -1.46
USP8-218ENST00000561330 Q6ZNX1 250 aa5.92□□□□□ -1.46
USP8-218ENST00000561330 CHST15Q7LFX5 561 aaPredicted RBP5.92□□□□□ -1.46
USP8-218ENST00000561330 FAM9AQ8IZU1 332 aaPredicted RBP5.92□□□□□ -1.46
USP8-218ENST00000561330 SLC30A5Q8TAD4 765 aa5.92□□□□□ -1.46
USP8-218ENST00000561330 KBTBD7Q8WVZ9 684 aa5.92□□□□□ -1.46
USP8-218ENST00000561330 P2RX7Q99572 595 aaKnown RBP5.92□□□□□ -1.46
USP8-218ENST00000561330 HEPHQ9BQS7 1158 aa5.92□□□□□ -1.46
USP8-218ENST00000561330 IKZF4Q9H2S9 585 aa5.92□□□□□ -1.46
USP8-218ENST00000561330 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.92□□□□□ -1.46
USP8-218ENST00000561330 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.92□□□□□ -1.46
USP8-218ENST00000561330 CFAP69A5D8W1 941 aa5.91□□□□□ -1.46
USP8-218ENST00000561330 A6NNZ2 444 aa5.91□□□□□ -1.46
USP8-218ENST00000561330 TRIAP1O43715 76 aa5.91□□□□□ -1.46
USP8-218ENST00000561330 PEX1O43933 1283 aa5.91□□□□□ -1.46
USP8-218ENST00000561330 ESRRBO95718 433 aa5.91□□□□□ -1.46
USP8-218ENST00000561330 SRGNP10124 158 aa5.91□□□□□ -1.46
USP8-218ENST00000561330 GCLCP48506 637 aaPredicted RBP5.91□□□□□ -1.46
USP8-218ENST00000561330 CACNB3P54284 484 aa5.91□□□□□ -1.46
USP8-218ENST00000561330 LONRF3Q496Y0 759 aa5.91□□□□□ -1.46
USP8-218ENST00000561330 ZNF783Q6ZMS7 281 aa5.91□□□□□ -1.46
USP8-218ENST00000561330 CCDC149Q6ZUS6 474 aa5.91□□□□□ -1.46
USP8-218ENST00000561330 COL23A1Q86Y22 540 aaPredicted RBP5.91□□□□□ -1.46
USP8-218ENST00000561330 FBXO41Q8TF61 875 aa5.91□□□□□ -1.46
USP8-218ENST00000561330 MOGAT1Q96PD6 335 aa5.91□□□□□ -1.46
USP8-218ENST00000561330 TRIM54Q9BYV2 358 aa5.91□□□□□ -1.46
USP8-218ENST00000561330 ATP6V0A4Q9HBG4 840 aa5.91□□□□□ -1.46
USP8-218ENST00000561330 HESX1Q9UBX0 185 aa5.91□□□□□ -1.46
USP8-218ENST00000561330 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.91□□□□□ -1.46
USP8-218ENST00000561330 TMX2Q9Y320 296 aa5.91□□□□□ -1.46
USP8-218ENST00000561330 DMRT1Q9Y5R6 373 aa5.91□□□□□ -1.46
USP8-218ENST00000561330 MYO1CO00159 1063 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 YY2O15391 372 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 ZBED1O96006 694 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 HRGP04196 525 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 ATXN1LP0C7T5 689 aaKnown RBP5.9□□□□□ -1.46
USP8-218ENST00000561330 SLC7A1P30825 629 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 MPLP40238 635 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 TOB1P50616 345 aaPredicted RBP5.9□□□□□ -1.46
USP8-218ENST00000561330 ARFIP2P53365 341 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 FOXI1Q12951 378 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 SWSAP1Q6NVH7 229 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 VWA1Q6PCB0 445 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 DARS2Q6PI48 645 aaKnown RBP5.9□□□□□ -1.46
USP8-218ENST00000561330 B3GALNT2Q8NCR0 500 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 FAM156AQ8NDB6 213 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 OR6B3Q8NGW1 331 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 IL31RAQ8NI17 732 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 LPIN2Q92539 896 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 SLC46A1Q96NT5 459 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 SPATA5L1Q9BVQ7 753 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 C22orf23Q9BZE7 217 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 TTYH3Q9C0H2 523 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 TPCN1Q9ULQ1 816 aa5.9□□□□□ -1.46
USP8-218ENST00000561330 BTN3A1O00481 513 aa5.89□□□□□ -1.47
USP8-218ENST00000561330 TPP1O14773 563 aa5.89□□□□□ -1.47
USP8-218ENST00000561330 TBC1D4O60343 1298 aa5.89□□□□□ -1.47
USP8-218ENST00000561330 EN2P19622 333 aaPredicted RBP5.89□□□□□ -1.47
USP8-218ENST00000561330 PROZP22891 400 aa5.89□□□□□ -1.47
USP8-218ENST00000561330 VIPR2P41587 438 aa5.89□□□□□ -1.47
USP8-218ENST00000561330 UCP3P55916 312 aa5.89□□□□□ -1.47
USP8-218ENST00000561330 MRPS35P82673 323 aaKnown RBP5.89□□□□□ -1.47
USP8-218ENST00000561330 BOP1Q14137 746 aaKnown RBP5.89□□□□□ -1.47
USP8-218ENST00000561330 IQCB1Q15051 598 aa5.89□□□□□ -1.47
USP8-218ENST00000561330 KIAA0753Q2KHM9 967 aa5.89□□□□□ -1.47
USP8-218ENST00000561330 RBM20Q5T481 1227 aaKnown RBP5.89□□□□□ -1.47
USP8-218ENST00000561330 RNF220Q5VTB9 566 aa5.89□□□□□ -1.47
USP8-218ENST00000561330 LMBRD2Q68DH5 695 aaPredicted RBP5.89□□□□□ -1.47
USP8-218ENST00000561330 LAYNQ6UX15 382 aa5.89□□□□□ -1.47
USP8-218ENST00000561330 TMEM108Q6UXF1 575 aa5.89□□□□□ -1.47
USP8-218ENST00000561330 DGKHQ86XP1 1220 aa5.89□□□□□ -1.47
USP8-218ENST00000561330 TOR1AIP2Q8NFQ8 470 aa5.89□□□□□ -1.47
USP8-218ENST00000561330 SLC9A6Q92581 669 aa5.89□□□□□ -1.47
USP8-218ENST00000561330 ANKS1AQ92625 1134 aa5.89□□□□□ -1.47
USP8-218ENST00000561330 FBXL20Q96IG2 436 aa5.89□□□□□ -1.47
USP8-218ENST00000561330 OSBPL9Q96SU4 736 aa5.89□□□□□ -1.47
USP8-218ENST00000561330 KRTAP17-1Q9BYP8 105 aa5.89□□□□□ -1.47
USP8-218ENST00000561330 GOLIM4O00461 696 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 PROM1O43490 865 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 FRS3O43559 492 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 PPP3CBP16298 524 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 CD6P30203 668 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 ADRA1BP35368 520 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 FOLR3P41439 243 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 SLC11A2P49281 568 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 NXPH1P58417 271 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 FAM193AP78312 1265 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 ITIH3Q06033 890 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms