RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 GRHL1Q9NZI5 618 aa20.22■□□□□ 0.83
HMBOX1-215ENST00000560599 BARX2Q9UMQ3 279 aaPredicted RBP20.22■□□□□ 0.83
HMBOX1-215ENST00000560599 SNX24Q9Y343 169 aa20.22■□□□□ 0.83
HMBOX1-215ENST00000560599 HMGB1P1B2RPK0 211 aaPredicted RBP20.21■□□□□ 0.83
HMBOX1-215ENST00000560599 HMGCRP04035 888 aa20.21■□□□□ 0.83
HMBOX1-215ENST00000560599 COPS2P61201 443 aa20.21■□□□□ 0.83
HMBOX1-215ENST00000560599 DHX9Q08211 1270 aaKnown RBP20.21■□□□□ 0.83
HMBOX1-215ENST00000560599 UAP1Q16222 522 aaPredicted RBP20.21■□□□□ 0.83
HMBOX1-215ENST00000560599 PTPN20Q4JDL3 420 aa20.21■□□□□ 0.83
HMBOX1-215ENST00000560599 TTMPQ5BVD1 217 aa20.21■□□□□ 0.83
HMBOX1-215ENST00000560599 C17orf99Q6UX52 265 aa20.21■□□□□ 0.83
HMBOX1-215ENST00000560599 ZDHHC24Q6UX98 284 aa20.21■□□□□ 0.83
HMBOX1-215ENST00000560599 RUFY4Q6ZNE9 571 aa20.21■□□□□ 0.83
HMBOX1-215ENST00000560599 WDTC1Q8N5D0 677 aa20.21■□□□□ 0.83
HMBOX1-215ENST00000560599 BEST2Q8NFU1 509 aa20.21■□□□□ 0.83
HMBOX1-215ENST00000560599 FNIP1Q8TF40 1166 aa20.21■□□□□ 0.83
HMBOX1-215ENST00000560599 TSPAN18Q96SJ8 248 aa20.21■□□□□ 0.83
HMBOX1-215ENST00000560599 TXLNGYQ9BZA5 131 aa20.21■□□□□ 0.83
HMBOX1-215ENST00000560599 OSBPL8Q9BZF1 889 aa20.21■□□□□ 0.83
HMBOX1-215ENST00000560599 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.21■□□□□ 0.83
HMBOX1-215ENST00000560599 MICAL2O94851 1124 aa20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 GJB6O95452 261 aa20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 MYL3P08590 195 aa20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 RALAP11233 206 aa20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 GJC1P36383 396 aa20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 RPL21P46778 160 aaKnown RBP20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 CDH8P55286 799 aa20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 EIF3BP55884 814 aaKnown RBP20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 INHBEP58166 350 aa20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 KRT17Q04695 432 aa20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 KLF1Q13351 362 aaPredicted RBP20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 PTK6Q13882 451 aa20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 ODF2Q5BJF6 829 aa20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 PRAMEF19Q5SWL8 479 aa20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 LEKR1Q6ZMV7 388 aa20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 LRRC52Q8N7C0 313 aa20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 ARL8AQ96BM9 186 aa20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 ZFYVE28Q9HCC9 887 aa20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 FLRT1Q9NZU1 646 aa20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 WHRNQ9P202 907 aa20.2■□□□□ 0.82
HMBOX1-215ENST00000560599 SIGLEC16A6NMB1 481 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 A6NNZ2 444 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 M0QYV0 167 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 ITGBL1O95965 494 aaPredicted RBP20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 SLC10A3P09131 477 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 GNAT1P11488 350 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 CAPN2P17655 700 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 FGFR4P22455 802 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 PSMC1P62191 440 aaKnown RBP20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 RPL7AP62424 266 aaKnown RBP20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 ZNF252P-AS1Q0IIN9 211 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 CALCOCO2Q13137 446 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 ZNF268Q14587 947 aaPredicted RBP20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 CNGA2Q16280 664 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 CCNG2Q16589 344 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 TUBB8Q3ZCM7 444 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 CEP85LQ5SZL2 805 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 CYP4A22Q5TCH4 519 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 RGMBQ6NW40 437 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 POLNQ7Z5Q5 900 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 IFNL1Q8IU54 200 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 IPO4Q8TEX9 1081 aaKnown RBP20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 C1orf54Q8WWF1 131 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 ATP6V1G3Q96LB4 118 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 OSMRQ99650 979 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 SYNCQ9H7C4 482 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 TMBIM4Q9HC24 238 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 O00370 1275 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 XPOTO43592 962 aaKnown RBP20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 MYZAPP0CAP1 466 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 ATF7P17544 494 aaPredicted RBP20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 HOXA11P31270 313 aaPredicted RBP20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 FLT3P36888 993 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 PLTPP55058 493 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 SKOR1P84550 965 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 CAV1Q03135 178 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 NFX1Q12986 1120 aaKnown RBP20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 SLMAPQ14BN4 828 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 ART4Q93070 314 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 SLITRK1Q96PX8 696 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 TWNKQ96RR1 684 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 TRIM6Q9C030 488 aaPredicted RBP20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 CNTN3Q9P232 1028 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 HMGXB4Q9UGU5 601 aa20.19■□□□□ 0.82
HMBOX1-215ENST00000560599 C17orf102A2RUQ5 167 aa20.18■□□□□ 0.82
HMBOX1-215ENST00000560599 H0YGN5 161 aa20.18■□□□□ 0.82
HMBOX1-215ENST00000560599 GOLGA8SH3BPF8 625 aa20.18■□□□□ 0.82
HMBOX1-215ENST00000560599 KPNA6O60684 536 aa20.18■□□□□ 0.82
HMBOX1-215ENST00000560599 KRT14P02533 472 aa20.18■□□□□ 0.82
HMBOX1-215ENST00000560599 KRT3P12035 628 aa20.18■□□□□ 0.82
HMBOX1-215ENST00000560599 PSMA2P25787 234 aa20.18■□□□□ 0.82
HMBOX1-215ENST00000560599 NDST1P52848 882 aa20.18■□□□□ 0.82
HMBOX1-215ENST00000560599 PMS2P54278 862 aa20.18■□□□□ 0.82
HMBOX1-215ENST00000560599 ADAM17P78536 824 aa20.18■□□□□ 0.82
HMBOX1-215ENST00000560599 LMNB2Q03252 620 aa20.18■□□□□ 0.82
HMBOX1-215ENST00000560599 TMEM62Q0P6H9 643 aa20.18■□□□□ 0.82
HMBOX1-215ENST00000560599 SREBF2Q12772 1141 aa20.18■□□□□ 0.82
HMBOX1-215ENST00000560599 AGBL2Q5U5Z8 902 aa20.18■□□□□ 0.82
HMBOX1-215ENST00000560599 BBOF1Q8ND07 529 aa20.18■□□□□ 0.82
HMBOX1-215ENST00000560599 ATL2Q8NHH9 583 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms