RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, human

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCB-208	ENST00000487674	SCN1A	P35498	2009 aa		9.25	□□□□□ -0.93
PRKCB-208	ENST00000487674	TCHH	Q07283	1943 aa		9.25	□□□□□ -0.93
PRKCB-208	ENST00000487674	MED19	A0JLT2	244 aa	Predicted RBP	9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	ANO9	A1A5B4	782 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	PIR	O00625	290 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	CYP11A1	P05108	521 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	CCNE1	P24864	410 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	POU5F1	Q01860	360 aa	Known RBP	9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	LMNB2	Q03252	620 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	LRRC32	Q14392	662 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	VEPH1	Q14D04	833 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	KARS	Q15046	597 aa	Known RBP	9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	ARHGAP15	Q53QZ3	475 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	STXBP5	Q5T5C0	1151 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	SLFN12L	Q6IEE8	588 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	GAREM2	Q75VX8	874 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	ARID3B	Q8IVW6	561 aa	Predicted RBP	9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	TTC9B	Q8N6N2	239 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	ATAD1	Q8NBU5	361 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	OR10T2	Q8NGX3	314 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	LARP4B	Q92615	738 aa	Known RBP	9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	HVCN1	Q96D96	273 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	RSPRY1	Q96DX4	576 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	TMEM209	Q96SK2	561 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	MKNK1	Q9BUB5	465 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	ST6GALNAC4	Q9H4F1	302 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	ZHX3	Q9H4I2	956 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	ASB7	Q9H672	318 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	C8orf33	Q9H7E9	229 aa	Predicted RBP	9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	LMAN1L	Q9HAT1	526 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	UPF2	Q9HAU5	1272 aa	Known RBP	9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	OBP2A	Q9NY56	170 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	GMEB2	Q9UKD1	530 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	SLC27A5	Q9Y2P5	690 aa		9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	9.24	□□□□□ -0.93
PRKCB-208	ENST00000487674	FRYL	O94915	3013 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	DNAH14	Q0VDD8	3507 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	SLC38A8	A6NNN8	435 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	SOAT2	O75908	522 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	CHRNB1	P11230	501 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	ATF6	P18850	670 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	SDHB	P21912	280 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	GABRR2	P28476	465 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	WEE1	P30291	646 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	CDC25C	P30307	473 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	NMT1	P30419	496 aa	Known RBP	9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	TUFM	P49411	452 aa	Known RBP	9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	ACOT2	P49753	483 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	TAF6	P49848	677 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	KPNA1	P52294	538 aa	Predicted RBP	9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	PRSS12	P56730	875 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	GRIN1	Q05586	938 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	SMARCB1	Q12824	385 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	LAPTM4A	Q15012	233 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	SF3A1	Q15459	793 aa	Known RBP	9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	RSPO4	Q2I0M5	234 aa	Predicted RBP	9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	SLC39A12	Q504Y0	691 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	ARHGAP29	Q52LW3	1261 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	LARP1B	Q659C4	914 aa	Known RBP	9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	ADAL	Q6DHV7	355 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	RALGPS2	Q86X27	583 aa	Predicted RBP	9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	METTL23	Q86XA0	190 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	SPEM1	Q8N4L4	309 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	KRI1	Q8N9T8	703 aa	Known RBP	9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	C2orf15	Q8WU43	125 aa	Known RBP	9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	GCNA	Q96QF7	691 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	SEPT5	Q99719	369 aa	Predicted RBP	9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	CCSER1	Q9C0I3	900 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	ZCWPW1	Q9H0M4	648 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	ATXN3L	Q9H3M9	355 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	AGO2	Q9UKV8	859 aa	Known RBP	9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	RAB23	Q9ULC3	237 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	STYXL1	Q9Y6J8	313 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	OBSL1	O75147	1896 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	DENND4C	Q5VZ89	1909 aa		9.23	□□□□□ -0.93
PRKCB-208	ENST00000487674	MYBPHL	A2RUH7	354 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	PRR5-ARHGAP8	B1AHC4	643 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	TISP43	B9A030	160 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	ANKRD63	C9JTQ0	380 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	SPECC1L-ADORA2A	F8WAN1	911 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	CYB561D2	O14569	222 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	PAPSS2	O95340	614 aa	Predicted RBP	9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	PRAMEF12	O95522	483 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	CTH	P32929	405 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	MLLT3	P42568	568 aa	Predicted RBP	9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	CXCL12	P48061	93 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	SOX9	P48436	509 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	ARHGAP8	P85298	464 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	SATB1	Q01826	763 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	GAS6	Q14393	721 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	MGAT5B	Q3V5L5	792 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	SV2C	Q496J9	727 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	DGKK	Q5KSL6	1271 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	GPR158	Q5T848	1215 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	LAIR1	Q6GTX8	287 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	SFR1	Q86XK3	245 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	NT5DC4	Q86YG4	428 aa		9.22	□□□□□ -0.93
PRKCB-208	ENST00000487674	EFCAB13	Q8IY85	973 aa		9.22	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms