RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 GRAMD1CQ8IYS0 662 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 DCP1BQ8IZD4 617 aaKnown RBP9.71□□□□□ -0.86
USF1-204ENST00000472217 OR5B17Q8NGF7 314 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 FAM200AQ8TCP9 573 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 C2orf15Q8WU43 125 aaKnown RBP9.71□□□□□ -0.86
USF1-204ENST00000472217 SCFD1Q8WVM8 642 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 DNASE1L2Q92874 299 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 RSPRY1Q96DX4 576 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 ANKRD36BP1Q96IX9 119 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 CHAMP1Q96JM3 812 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 MKNK1Q9BUB5 465 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 TRMT61BQ9BVS5 477 aaKnown RBP9.71□□□□□ -0.86
USF1-204ENST00000472217 GPR88Q9GZN0 384 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 BRD9Q9H8M2 597 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 HEBP1Q9NRV9 189 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 AGPAT3Q9NRZ7 376 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 TMLHEQ9NVH6 421 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 GDAP2Q9NXN4 497 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 SERTAD1Q9UHV2 236 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 ZDHHC9Q9Y397 364 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 MTF2Q9Y483 593 aaPredicted RBP9.71□□□□□ -0.86
USF1-204ENST00000472217 SNX9Q9Y5X1 595 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 MIA3Q5JRA6 1907 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 UBE4BO95155 1302 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 PATJQ8NI35 1801 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 NUP210Q8TEM1 1887 aaPredicted RBP9.7□□□□□ -0.86
USF1-204ENST00000472217 TICRRQ7Z2Z1 1910 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 PVALEFA0A1B0GWK0 134 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 SHISA7A6NL88 538 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 CLIC2O15247 247 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 HCRTO43612 131 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 SLFN14P0C7P3 912 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 HAPLN1P10915 354 aaPredicted RBP9.7□□□□□ -0.86
USF1-204ENST00000472217 ACAT1P24752 427 aaKnown RBP9.7□□□□□ -0.86
USF1-204ENST00000472217 GABRR2P28476 465 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 CYP2J2P51589 502 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 RBP5P82980 135 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 TSPY1Q01534 308 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 SMARCB1Q12824 385 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 UBXN2BQ14CS0 331 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 VEPH1Q14D04 833 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 SURF1Q15526 300 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 SNRNP35Q16560 246 aaKnown RBP9.7□□□□□ -0.86
USF1-204ENST00000472217 CCDC142Q17RM4 750 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 BMT2Q1RMZ1 405 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 ASCL5Q7RTU5 278 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 OSTM1Q86WC4 334 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 WDR49Q8IV35 697 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 CEP57L1Q8IYX8 460 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 ADGRF2Q8IZF7 708 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 TMEM86AQ8N2M4 240 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 RDH13Q8NBN7 331 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 GIPC2Q8TF65 315 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 DEPDC1BQ8WUY9 529 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 LEO1Q8WVC0 666 aaPredicted RBP9.7□□□□□ -0.86
USF1-204ENST00000472217 IRF7Q92985 503 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 OSBPL6Q9BZF3 934 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 ATXN3LQ9H3M9 355 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 KIAA1586Q9HCI6 787 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 SLC39A2Q9NP94 309 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 LTB4R2Q9NPC1 389 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 DDX43Q9NXZ2 648 aaKnown RBP9.7□□□□□ -0.86
USF1-204ENST00000472217 PCDHB5Q9Y5E4 795 aa9.7□□□□□ -0.86
USF1-204ENST00000472217 PRR23AA6NEV1 266 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 FAM170BA6NMN3 283 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 HEPACAM2A8MVW5 462 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 GABRDO14764 452 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 KLRC4O43908 158 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 FGF19O95750 216 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 TNNC2P02585 160 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 PFKFB1P16118 471 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 TARSP26639 723 aaKnown RBP9.69□□□□□ -0.86
USF1-204ENST00000472217 GDI1P31150 447 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 GPR15P49685 360 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 CYP4F8P98187 520 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 MYL7Q01449 175 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 MYO1EQ12965 1108 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 NFE2Q16621 373 aaPredicted RBP9.69□□□□□ -0.86
USF1-204ENST00000472217 DUOXA2Q1HG44 320 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 SOWAHAQ2M3V2 549 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 ARHGAP15Q53QZ3 475 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 INTS6LQ5JSJ4 861 aaKnown RBP9.69□□□□□ -0.86
USF1-204ENST00000472217 GPR158Q5T848 1215 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 ZNF852Q6ZMS4 543 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 HS2ST1Q7LGA3 356 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 TRAPPC11Q7Z392 1133 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 GPIHBP1Q8IV16 184 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 ARID3BQ8IVW6 561 aaPredicted RBP9.69□□□□□ -0.86
USF1-204ENST00000472217 C1orf210Q8IVY1 113 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 MFSD6LQ8IWD5 586 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 TOP6BLQ8N6T0 577 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 XXYLT1Q8NBI6 393 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 STKLD1Q8NE28 680 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 SPATA18Q8TC71 538 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 PIEZO1Q92508 2521 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 E2F7Q96AV8 911 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 PAGE5Q96GU1 130 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 HPDLQ96IR7 371 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 SPATA32Q96LK8 384 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 PKMYT1Q99640 499 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms