RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 NCKAP1LP55160 1127 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 POLR2GP62487 172 aaKnown RBP eCLIP9.01□□□□□ -0.97
TDP1-201ENST00000335725 S100A12P80511 92 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 DLG1Q12959 904 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 PAK1Q13153 545 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 AUHQ13825 339 aaKnown RBP9.01□□□□□ -0.97
TDP1-201ENST00000335725 RPS6KA1Q15418 735 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 SLC15A2Q16348 729 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 FIGNQ5HY92 759 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 RAVER1Q8IY67 606 aaKnown RBP9.01□□□□□ -0.97
TDP1-201ENST00000335725 C12orf50Q8NA57 414 aaPredicted RBP9.01□□□□□ -0.97
TDP1-201ENST00000335725 PJA1Q8NG27 643 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 WASF1Q92558 559 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 HSPH1Q92598 858 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 INTS12Q96CB8 462 aaKnown RBP9.01□□□□□ -0.97
TDP1-201ENST00000335725 WNK4Q96J92 1243 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 PCMTD1Q96MG8 357 aaPredicted RBP9.01□□□□□ -0.97
TDP1-201ENST00000335725 FOXP3Q9BZS1 431 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 SLC12A5Q9H2X9 1139 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 RAB26Q9ULW5 256 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 VPS4AQ9UN37 437 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 EPN2O95208 641 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 THRAP10827 490 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 TPTEP56180 551 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 ACTR3P61158 418 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 CCNJQ5T5M9 372 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 GATAD2AQ86YP4 633 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 TCAIMQ8N3R3 496 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 FBXL16Q8N461 479 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 GALNT11Q8NCW6 608 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 NEDD1Q8NHV4 660 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 CDC26Q8NHZ8 85 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 ZNF717Q9BY31 904 aaPredicted RBP9.01□□□□□ -0.97
TDP1-201ENST00000335725 OR2B2Q9GZK3 357 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 RAD21L1Q9H4I0 556 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 ZFYVE28Q9HCC9 887 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 PI4KBQ9UBF8 816 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 CDH7Q9ULB5 785 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 PHTF1Q9UMS5 762 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 TMEM5Q9Y2B1 443 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 AP3M1Q9Y2T2 418 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 SLC45A1Q9Y2W3 748 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 A8MX80 341 aa9□□□□□ -0.97
TDP1-201ENST00000335725 NBPF26B4DH59 902 aa9□□□□□ -0.97
TDP1-201ENST00000335725 F8W810 466 aa9□□□□□ -0.97
TDP1-201ENST00000335725 MTSS1O43312 755 aa9□□□□□ -0.97
TDP1-201ENST00000335725 PDE8AO60658 829 aa9□□□□□ -0.97
TDP1-201ENST00000335725 CD48P09326 243 aa9□□□□□ -0.97
TDP1-201ENST00000335725 TAC1P20366 129 aa9□□□□□ -0.97
TDP1-201ENST00000335725 PMLP29590 882 aa9□□□□□ -0.97
TDP1-201ENST00000335725 PRDX6P30041 224 aa9□□□□□ -0.97
TDP1-201ENST00000335725 NR2C2P49116 596 aa9□□□□□ -0.97
TDP1-201ENST00000335725 MRPS15P82914 257 aaKnown RBP9□□□□□ -0.97
TDP1-201ENST00000335725 MRPS9P82933 396 aaKnown RBP9□□□□□ -0.97
TDP1-201ENST00000335725 RAD51Q06609 339 aa9□□□□□ -0.97
TDP1-201ENST00000335725 SLC29A2Q14542 456 aa9□□□□□ -0.97
TDP1-201ENST00000335725 MEI1Q5TIA1 1274 aa9□□□□□ -0.97
TDP1-201ENST00000335725 ITPRIPL1Q6GPH6 555 aa9□□□□□ -0.97
TDP1-201ENST00000335725 GALNT13Q8IUC8 556 aa9□□□□□ -0.97
TDP1-201ENST00000335725 CCDC89Q8N998 374 aa9□□□□□ -0.97
TDP1-201ENST00000335725 ZNF579Q8NAF0 562 aaKnown RBP9□□□□□ -0.97
TDP1-201ENST00000335725 TM9SF2Q99805 663 aa9□□□□□ -0.97
TDP1-201ENST00000335725 MROQ9BYG7 248 aa9□□□□□ -0.97
TDP1-201ENST00000335725 VPS37BQ9H9H4 285 aa9□□□□□ -0.97
TDP1-201ENST00000335725 PCDH12Q9NPG4 1184 aa9□□□□□ -0.97
TDP1-201ENST00000335725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9□□□□□ -0.97
TDP1-201ENST00000335725 PPP1R3GB7ZBB8 358 aa9□□□□□ -0.97
TDP1-201ENST00000335725 H3BUI4 141 aa9□□□□□ -0.97
TDP1-201ENST00000335725 IRS4O14654 1257 aaPredicted RBP9□□□□□ -0.97
TDP1-201ENST00000335725 ACOX3O15254 700 aa9□□□□□ -0.97
TDP1-201ENST00000335725 UGT1A9O60656 530 aa9□□□□□ -0.97
TDP1-201ENST00000335725 UGT1A6P19224 532 aa9□□□□□ -0.97
TDP1-201ENST00000335725 UGT1A1P22309 533 aa9□□□□□ -0.97
TDP1-201ENST00000335725 UGT1A4P22310 534 aa9□□□□□ -0.97
TDP1-201ENST00000335725 UGT1A3P35503 534 aa9□□□□□ -0.97
TDP1-201ENST00000335725 UGT1A5P35504 534 aa9□□□□□ -0.97
TDP1-201ENST00000335725 CD300CQ08708 224 aa9□□□□□ -0.97
TDP1-201ENST00000335725 MOGSQ13724 837 aa9□□□□□ -0.97
TDP1-201ENST00000335725 OXA1LQ15070 435 aa9□□□□□ -0.97
TDP1-201ENST00000335725 MTERF2Q49AM1 385 aa9□□□□□ -0.97
TDP1-201ENST00000335725 SFT2D3Q587I9 215 aa9□□□□□ -0.97
TDP1-201ENST00000335725 RAPH1Q70E73 1250 aa9□□□□□ -0.97
TDP1-201ENST00000335725 CLNKQ7Z7G1 428 aa9□□□□□ -0.97
TDP1-201ENST00000335725 APPL2Q8NEU8 664 aa9□□□□□ -0.97
TDP1-201ENST00000335725 FAM149B1Q96BN6 582 aa9□□□□□ -0.97
TDP1-201ENST00000335725 HOXD1Q9GZZ0 328 aa9□□□□□ -0.97
TDP1-201ENST00000335725 KCNN2Q9H2S1 579 aa9□□□□□ -0.97
TDP1-201ENST00000335725 UGT1A7Q9HAW7 530 aa9□□□□□ -0.97
TDP1-201ENST00000335725 UGT1A10Q9HAW8 530 aa9□□□□□ -0.97
TDP1-201ENST00000335725 UGT1A8Q9HAW9 530 aa9□□□□□ -0.97
TDP1-201ENST00000335725 SACM1LQ9NTJ5 587 aa9□□□□□ -0.97
TDP1-201ENST00000335725 ASIC3Q9UHC3 531 aa9□□□□□ -0.97
TDP1-201ENST00000335725 NUP50Q9UKX7 468 aa9□□□□□ -0.97
TDP1-201ENST00000335725 BET1O15155 118 aa9□□□□□ -0.97
TDP1-201ENST00000335725 BMP10O95393 424 aa9□□□□□ -0.97
TDP1-201ENST00000335725 DDX58O95786 925 aaKnown RBP9□□□□□ -0.97
TDP1-201ENST00000335725 RARBP10826 455 aa9□□□□□ -0.97
TDP1-201ENST00000335725 PSMC2P35998 433 aaKnown RBP9□□□□□ -0.97
TDP1-201ENST00000335725 HSPA13P48723 471 aa9□□□□□ -0.97
TDP1-201ENST00000335725 METTL11BQ5VVY1 283 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms