RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	ERP1	Q05359	219 aa	Known RBP	6.25	□□□□□ -1.41
TGA1	tA(UGC)A	FCY2	P17064	533 aa		6.24	□□□□□ -1.41
TGA1	tA(UGC)A	YCR025C	P25352	136 aa		6.24	□□□□□ -1.41
TGA1	tA(UGC)A	RRT1	P38192	103 aa		6.24	□□□□□ -1.41
TGA1	tA(UGC)A	CSH1	P38287	376 aa		6.24	□□□□□ -1.41
TGA1	tA(UGC)A	RRF1	P38771	230 aa		6.24	□□□□□ -1.41
TGA1	tA(UGC)A	FLO5	P38894	1075 aa		6.24	□□□□□ -1.41
TGA1	tA(UGC)A	MRPL49	P40858	161 aa	Predicted RBP	6.24	□□□□□ -1.41
TGA1	tA(UGC)A	YPI1	P43587	155 aa		6.24	□□□□□ -1.41
TGA1	tA(UGC)A	PDR17	P53844	350 aa		6.24	□□□□□ -1.41
TGA1	tA(UGC)A	YDR274C	P87283	123 aa		6.24	□□□□□ -1.41
TGA1	tA(UGC)A	GRH1	Q04410	372 aa	Known RBP	6.24	□□□□□ -1.41
TGA1	tA(UGC)A	ATG39	Q06159	398 aa		6.24	□□□□□ -1.41
TGA1	tA(UGC)A	SCM3	Q12334	223 aa		6.24	□□□□□ -1.41
TGA1	tA(UGC)A	GRX2	P17695	143 aa	Known RBP	6.23	□□□□□ -1.41
TGA1	tA(UGC)A	YGR269W	P40326	108 aa		6.23	□□□□□ -1.41
TGA1	tA(UGC)A	ECM27	P47144	725 aa		6.23	□□□□□ -1.41
TGA1	tA(UGC)A	RPA14	P50106	137 aa		6.23	□□□□□ -1.41
TGA1	tA(UGC)A	LRS4	Q04087	347 aa	Known RBP	6.23	□□□□□ -1.41
TGA1	tA(UGC)A	YLR281C	Q05863	155 aa		6.23	□□□□□ -1.41
TGA1	tA(UGC)A	PRR2	Q12310	699 aa		6.23	□□□□□ -1.41
TGA1	tA(UGC)A	PAA1	Q12447	191 aa	Known RBP	6.23	□□□□□ -1.41
TGA1	tA(UGC)A	YDR157W	A0A023PZE8	133 aa		6.22	□□□□□ -1.41
TGA1	tA(UGC)A	PIS1	P06197	220 aa	Known RBP	6.22	□□□□□ -1.41
TGA1	tA(UGC)A	ACB1	P31787	87 aa		6.22	□□□□□ -1.41
TGA1	tA(UGC)A	POR2	P40478	281 aa		6.22	□□□□□ -1.41
TGA1	tA(UGC)A	IMP2	P46972	177 aa		6.22	□□□□□ -1.41
TGA1	tA(UGC)A	BUL1	P48524	976 aa		6.22	□□□□□ -1.41
TGA1	tA(UGC)A	PNC1	P53184	216 aa	Known RBP	6.22	□□□□□ -1.41
TGA1	tA(UGC)A	YLR146W-A	Q2V2P1	62 aa		6.22	□□□□□ -1.41
TGA1	tA(UGC)A	YER137C	P40083	148 aa	Known RBP	6.21	□□□□□ -1.42
TGA1	tA(UGC)A	DUO1	P53168	247 aa	Known RBP	6.21	□□□□□ -1.42
TGA1	tA(UGC)A	PKP2	P53170	491 aa		6.21	□□□□□ -1.42
TGA1	tA(UGC)A	TIM44	Q01852	431 aa		6.21	□□□□□ -1.42
TGA1	tA(UGC)A	POM34	Q12445	299 aa		6.21	□□□□□ -1.42
TGA1	tA(UGC)A	YHR213W-A	Q8TGT4	77 aa		6.21	□□□□□ -1.42
TGA1	tA(UGC)A	COX2	P00410	251 aa		6.2	□□□□□ -1.42
TGA1	tA(UGC)A	RPS25B	P0C0T4	108 aa	Known RBP	6.2	□□□□□ -1.42
TGA1	tA(UGC)A	YHR213W	P0CI67	198 aa		6.2	□□□□□ -1.42
TGA1	tA(UGC)A	SIP1	P32578	815 aa		6.2	□□□□□ -1.42
TGA1	tA(UGC)A	AVT5	P38176	459 aa		6.2	□□□□□ -1.42
TGA1	tA(UGC)A	BOL3	P39724	118 aa		6.2	□□□□□ -1.42
TGA1	tA(UGC)A	SNU13	P39990	126 aa	Known RBP	6.2	□□□□□ -1.42
TGA1	tA(UGC)A	AGX1	P43567	385 aa		6.2	□□□□□ -1.42
TGA1	tA(UGC)A	YJR015W	P47090	510 aa		6.2	□□□□□ -1.42
TGA1	tA(UGC)A	YJR111C	P47148	283 aa	Known RBP	6.2	□□□□□ -1.42
TGA1	tA(UGC)A	LST7	P53237	242 aa		6.2	□□□□□ -1.42
TGA1	tA(UGC)A	POS5	Q06892	414 aa		6.2	□□□□□ -1.42
TGA1	tA(UGC)A	RPS25A	Q3E792	108 aa	Predicted RBP	6.2	□□□□□ -1.42
TGA1	tA(UGC)A	CDC7	P06243	507 aa		6.19	□□□□□ -1.42
TGA1	tA(UGC)A	SWM2	P40342	146 aa		6.19	□□□□□ -1.42
TGA1	tA(UGC)A	RTS2	P40962	232 aa		6.19	□□□□□ -1.42
TGA1	tA(UGC)A	HST4	P53688	370 aa		6.19	□□□□□ -1.42
TGA1	tA(UGC)A	BOR1	P53838	576 aa		6.19	□□□□□ -1.42
TGA1	tA(UGC)A	TDA6	Q06466	467 aa		6.19	□□□□□ -1.42
TGA1	tA(UGC)A	RPS8A	P0CX39	200 aa	Known RBP	6.18	□□□□□ -1.42
TGA1	tA(UGC)A	RPS8B	P0CX40	200 aa	Known RBP	6.18	□□□□□ -1.42
TGA1	tA(UGC)A	TDA4	P47153	279 aa		6.18	□□□□□ -1.42
TGA1	tA(UGC)A	LDS2	Q08218	356 aa		6.18	□□□□□ -1.42
TGA1	tA(UGC)A	YMR316C-A	I2HB70	103 aa		6.17	□□□□□ -1.42
TGA1	tA(UGC)A	SAR1	P20606	190 aa	Known RBP	6.17	□□□□□ -1.42
TGA1	tA(UGC)A	PRE9	P23638	258 aa	Known RBP	6.17	□□□□□ -1.42
TGA1	tA(UGC)A	ECM33	P38248	429 aa	Known RBP	6.17	□□□□□ -1.42
TGA1	tA(UGC)A	YEA4	P40004	342 aa		6.17	□□□□□ -1.42
TGA1	tA(UGC)A	ORM1	P53224	222 aa		6.17	□□□□□ -1.42
TGA1	tA(UGC)A	ERV25	P54837	211 aa	Known RBP	6.17	□□□□□ -1.42
TGA1	tA(UGC)A	MSC3	Q05812	728 aa		6.17	□□□□□ -1.42
TGA1	tA(UGC)A	UPS2	P35200	230 aa		6.16	□□□□□ -1.42
TGA1	tA(UGC)A	YRA2	P36036	203 aa	Known RBP RIP-Chip data	6.16	□□□□□ -1.42	not detected
TGA1	tA(UGC)A	SRL3	P36167	246 aa		6.16	□□□□□ -1.42
TGA1	tA(UGC)A	SIM1	P40472	476 aa		6.16	□□□□□ -1.42
TGA1	tA(UGC)A	MIC26	P50087	233 aa		6.16	□□□□□ -1.42
TGA1	tA(UGC)A	MIC27	P50945	234 aa		6.16	□□□□□ -1.42
TGA1	tA(UGC)A	YGL117W	P53133	265 aa		6.16	□□□□□ -1.42
TGA1	tA(UGC)A	OCA2	P53949	197 aa		6.16	□□□□□ -1.42
TGA1	tA(UGC)A	DID2	P69771	204 aa		6.16	□□□□□ -1.42
TGA1	tA(UGC)A	SCW10	Q04951	389 aa		6.16	□□□□□ -1.42
TGA1	tA(UGC)A	YLR179C	Q06252	201 aa	Known RBP	6.16	□□□□□ -1.42
TGA1	tA(UGC)A	ERS1	P17261	260 aa		6.15	□□□□□ -1.42
TGA1	tA(UGC)A	MST28	P39552	234 aa		6.15	□□□□□ -1.42
TGA1	tA(UGC)A	AIM24	P47127	394 aa		6.15	□□□□□ -1.42
TGA1	tA(UGC)A	MST27	P53176	234 aa		6.15	□□□□□ -1.42
TGA1	tA(UGC)A	TRI1	Q05024	226 aa		6.15	□□□□□ -1.42
TGA1	tA(UGC)A	ANT1	Q06497	328 aa		6.15	□□□□□ -1.42
TGA1	tA(UGC)A	AYT1	Q12226	474 aa		6.15	□□□□□ -1.42
TGA1	tA(UGC)A	AGC1	Q12482	902 aa		6.15	□□□□□ -1.42
TGA1	tA(UGC)A	AHT1	P29589	182 aa		6.14	□□□□□ -1.43
TGA1	tA(UGC)A	EMP24	P32803	203 aa	Known RBP	6.14	□□□□□ -1.43
TGA1	tA(UGC)A	YBL059W	P34224	193 aa		6.14	□□□□□ -1.43
TGA1	tA(UGC)A	SHB17	P36136	271 aa	Known RBP	6.14	□□□□□ -1.43
TGA1	tA(UGC)A	SNF11	P38956	169 aa		6.14	□□□□□ -1.43
TGA1	tA(UGC)A	PET100	P38958	111 aa		6.14	□□□□□ -1.43
TGA1	tA(UGC)A	GET2	P40056	285 aa		6.14	□□□□□ -1.43
TGA1	tA(UGC)A	CAF16	P43569	289 aa		6.14	□□□□□ -1.43
TGA1	tA(UGC)A	ATG27	P46989	271 aa		6.14	□□□□□ -1.43
TGA1	tA(UGC)A	TAD2	P47058	250 aa		6.14	□□□□□ -1.43
TGA1	tA(UGC)A	YGR025W	P53216	100 aa		6.14	□□□□□ -1.43
TGA1	tA(UGC)A	SDH7	Q04401	133 aa		6.14	□□□□□ -1.43
TGA1	tA(UGC)A	SHH3	Q04487	196 aa		6.14	□□□□□ -1.43
TGA1	tA(UGC)A	ARR3	Q06598	404 aa		6.14	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms