RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 STE18P18852 110 aa-1.89□□□□□ -2.71
snR56snR56 MAK31P23059 88 aa-1.89□□□□□ -2.71
snR56snR56 AVO2Q04749 426 aa-1.89□□□□□ -2.71
snR56snR56 AIM2P39721 246 aa-1.9□□□□□ -2.71
snR56snR56 YOL014WQ08110 124 aa-1.9□□□□□ -2.71
snR56snR56 RIF1P29539 1916 aa-1.9□□□□□ -2.71
snR56snR56 POL2P21951 2222 aaKnown RBP-1.9□□□□□ -2.71
snR56snR56 CCS1P40202 249 aaKnown RBP-1.91□□□□□ -2.72
snR56snR56 RFC2P40348 353 aa-1.91□□□□□ -2.72
snR56snR56 SRL4Q03085 281 aa-1.91□□□□□ -2.72
snR56snR56 YMR321CQ04898 105 aa-1.91□□□□□ -2.72
snR56snR56 FMN1Q03778 218 aa-1.92□□□□□ -2.72
snR56snR56 YLR283WQ05867 314 aa-1.92□□□□□ -2.72
snR56snR56 RPL28P02406 149 aaKnown RBP-1.93□□□□□ -2.72
snR56snR56 MER1P16523 270 aa-1.93□□□□□ -2.72
snR56snR56 CNB1P25296 175 aa-1.93□□□□□ -2.72
snR56snR56 CAF4P36130 643 aa-1.93□□□□□ -2.72
snR56snR56 HHT1P61830 136 aa-1.93□□□□□ -2.72
snR56snR56 YLR422WQ06409 1932 aa-1.93□□□□□ -2.72
snR56snR56 MATALPHA1P0CY06 175 aa-1.94□□□□□ -2.72
snR56snR56 HMLALPHA1P0CY07 175 aa-1.94□□□□□ -2.72
snR56snR56 CCC1P47818 322 aa-1.94□□□□□ -2.72
snR56snR56 VAM10Q08474 114 aa-1.94□□□□□ -2.72
snR56snR56 DML1Q03652 475 aa-1.95□□□□□ -2.72
snR56snR56 MDM32Q12171 622 aa-1.95□□□□□ -2.72
snR56snR56 FMC1P40491 155 aa-1.96□□□□□ -2.72
snR56snR56 YML100W-AQ8TGT0 57 aa-1.96□□□□□ -2.72
snR56snR56 ATG41Q12048 136 aa-1.97□□□□□ -2.72
snR56snR56 YMR31P19955 123 aa-1.98□□□□□ -2.73
snR56snR56 TAF14P35189 244 aa-1.98□□□□□ -2.73
snR56snR56 YBR027CP38220 110 aa-1.98□□□□□ -2.73
snR56snR56 TRM5P38793 499 aa-1.98□□□□□ -2.73
snR56snR56 IRC18P47056 224 aa-1.98□□□□□ -2.73
snR56snR56 DAS2Q12084 232 aa-1.98□□□□□ -2.73
snR56snR56 RHO1P06780 209 aaKnown RBP-1.99□□□□□ -2.73
snR56snR56 AUA1P32450 94 aa-1.99□□□□□ -2.73
snR56snR56 MVB12P42939 101 aa-1.99□□□□□ -2.73
snR56snR56 HUG1Q6Q5K6 68 aa-1.99□□□□□ -2.73
snR56snR56 HSL1P34244 1518 aa-2□□□□□ -2.73
snR56snR56 RPL24BP24000 155 aaKnown RBP-2□□□□□ -2.73
snR56snR56 OTU1P43558 301 aa-2□□□□□ -2.73
snR56snR56 FIP1P45976 327 aa-2□□□□□ -2.73
snR56snR56 FUS2Q05670 677 aa-2□□□□□ -2.73
snR56snR56 TAF2P23255 1407 aa-2.01□□□□□ -2.73
snR56snR56 MBF1O14467 151 aaKnown RBP-2.02□□□□□ -2.73
snR56snR56 NTG1P31378 399 aa-2.02□□□□□ -2.73
snR56snR56 VMA6P32366 345 aaKnown RBP-2.02□□□□□ -2.73
snR56snR56 ARO80Q04052 950 aa-2.02□□□□□ -2.73
snR56snR56 ATP20Q12233 115 aa-2.02□□□□□ -2.73
snR56snR56 MATALPHA2P0CY08 210 aa-2.03□□□□□ -2.73
snR56snR56 HMLALPHA2P0CY09 210 aa-2.03□□□□□ -2.73
snR56snR56 YCR016WP25617 290 aaKnown RBP-2.03□□□□□ -2.73
snR56snR56 MIC12P38341 106 aa-2.03□□□□□ -2.73
snR56snR56 APS3P47064 194 aa-2.03□□□□□ -2.73
snR56snR56 YJL009WP47078 108 aa-2.03□□□□□ -2.73
snR56snR56 NSG1P38837 291 aa-2.04□□□□□ -2.74
snR56snR56 YFL019CP43576 117 aa-2.04□□□□□ -2.74
snR56snR56 ADO1P47143 340 aaKnown RBP-2.04□□□□□ -2.74
snR56snR56 YOL164W-AQ3E7A5 60 aa-2.04□□□□□ -2.74
snR56snR56 THP2O13539 261 aaKnown RBP-2.05□□□□□ -2.74
snR56snR56 PHO13P19881 312 aa-2.05□□□□□ -2.74
snR56snR56 RRT1P38192 103 aa-2.05□□□□□ -2.74
snR56snR56 YMR315WQ04869 349 aaKnown RBP-2.05□□□□□ -2.74
snR56snR56 YLR036CQ07986 203 aa-2.05□□□□□ -2.74
snR56snR56 FIT3Q08907 204 aa-2.05□□□□□ -2.74
snR56snR56 GLR1P41921 483 aaKnown RBP-2.06□□□□□ -2.74
snR56snR56 TDA4P47153 279 aa-2.06□□□□□ -2.74
snR56snR56 GPI17Q04080 534 aa-2.06□□□□□ -2.74
snR56snR56 YDR010CQ12426 110 aa-2.06□□□□□ -2.74
snR56snR56 COA6Q3E846 104 aa-2.06□□□□□ -2.74
snR56snR56 RTC4P53850 401 aa-2.07□□□□□ -2.74
snR56snR56 YLR194CQ05777 254 aa-2.07□□□□□ -2.74
snR56snR56 NSA2P40078 261 aaKnown RBP-2.08□□□□□ -2.74
snR56snR56 SPS18P32572 300 aa-2.09□□□□□ -2.74
snR56snR56 RTC3P38804 111 aaPredicted RBP-2.09□□□□□ -2.74
snR56snR56 PET117Q02771 107 aa-2.09□□□□□ -2.74
snR56snR56 YDL157CQ12082 118 aa-2.09□□□□□ -2.74
snR56snR56 YKL183C-AQ3E765 70 aa-2.09□□□□□ -2.74
snR56snR56 IGO2Q9P305 131 aa-2.09□□□□□ -2.74
snR56snR56 UTP20P35194 2493 aaKnown RBP-2.09□□□□□ -2.74
snR56snR56 BRR2P32639 2163 aaKnown RBP-2.1□□□□□ -2.75
snR56snR56 YUH1P35127 236 aa-2.1□□□□□ -2.75
snR56snR56 YRA2P36036 203 aaKnown RBP RIP-Chip data-2.1□□□□□ -2.75not detected
snR56snR56 ATG8P38182 117 aaRIP-Chip data-2.1□□□□□ -2.75not detected
snR56snR56 RTR1P40084 226 aaPredicted RBP-2.1□□□□□ -2.75
snR56snR56 GEP7P53171 287 aa-2.1□□□□□ -2.75
snR56snR56 YCR087C-AP37263 153 aa-2.11□□□□□ -2.75
snR56snR56 YOR381W-AQ3E804 55 aa-2.11□□□□□ -2.75
snR56snR56 MRPL24P36525 258 aaPredicted RBP-2.12□□□□□ -2.75
snR56snR56 SBH1P52870 82 aa-2.12□□□□□ -2.75
snR56snR56 YLR031WQ07978 186 aa-2.12□□□□□ -2.75
snR56snR56 CMC4Q3E7A9 73 aa-2.12□□□□□ -2.75
snR56snR56 SEC16P48415 2195 aaKnown RBP-2.12□□□□□ -2.75
snR56snR56 YBR121C-AP0C5L4 52 aa-2.13□□□□□ -2.75
snR56snR56 RPS24AP0CX31 135 aaKnown RBP-2.13□□□□□ -2.75
snR56snR56 RPS24BP0CX32 135 aaKnown RBP-2.13□□□□□ -2.75
snR56snR56 FMP23P38231 175 aa-2.13□□□□□ -2.75
snR56snR56 YNL190WP53872 204 aa-2.13□□□□□ -2.75
snR56snR56 GRX5Q02784 150 aa-2.13□□□□□ -2.75
snR56snR56 RIM9Q04734 239 aa-2.13□□□□□ -2.75
Retrieved 100 of 5,963 RNA–protein pairs in 109.9 ms