RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 TMA23Q03525 211 aa-0.04□□□□□ -2.42
snR54snR54 YLR031WQ07978 186 aa-0.04□□□□□ -2.42
snR54snR54 HTB1P02293 131 aaKnown RBP-0.05□□□□□ -2.42
snR54snR54 HTB2P02294 131 aa-0.05□□□□□ -2.42
snR54snR54 YKR070WP36151 352 aaKnown RBP-0.05□□□□□ -2.42
snR54snR54 TDA4P47153 279 aa-0.05□□□□□ -2.42
snR54snR54 YHP1Q04116 353 aa-0.05□□□□□ -2.42
snR54snR54 YCR001WP25347 104 aa-0.06□□□□□ -2.42
snR54snR54 YNL184CP53876 108 aa-0.06□□□□□ -2.42
snR54snR54 YMR315WQ04869 349 aaKnown RBP-0.06□□□□□ -2.42
snR54snR54 ATP20Q12233 115 aa-0.06□□□□□ -2.42
snR54snR54 GIS3Q12418 502 aa-0.06□□□□□ -2.42
snR54snR54 YMR030W-AQ3E760 96 aa-0.06□□□□□ -2.42
snR54snR54 NTG1P31378 399 aa-0.07□□□□□ -2.42
snR54snR54 SBH1P52870 82 aa-0.07□□□□□ -2.42
snR54snR54 MMS2P53152 137 aa-0.07□□□□□ -2.42
snR54snR54 YDC1Q02896 317 aa-0.07□□□□□ -2.42
snR54snR54 AVO2Q04749 426 aa-0.07□□□□□ -2.42
snR54snR54 KEI1Q06346 221 aa-0.07□□□□□ -2.42
snR54snR54 ATG41Q12048 136 aa-0.07□□□□□ -2.42
snR54snR54 DAS2Q12084 232 aa-0.07□□□□□ -2.42
snR54snR54 DGK1Q12382 290 aa-0.07□□□□□ -2.42
snR54snR54 RRT1P38192 103 aa-0.08□□□□□ -2.42
snR54snR54 HHY1P39982 102 aa-0.08□□□□□ -2.42
snR54snR54 DML1Q03652 475 aa-0.08□□□□□ -2.42
snR54snR54 RUD3Q12234 484 aaKnown RBP-0.08□□□□□ -2.42
snR54snR54 YCL012CQ8J0M4 134 aa-0.08□□□□□ -2.42
snR54snR54 YHR213W-BQ8TGK1 99 aa-0.08□□□□□ -2.42
snR54snR54 IGO2Q9P305 131 aa-0.08□□□□□ -2.42
snR54snR54 SHB17P36136 271 aaKnown RBP-0.09□□□□□ -2.42
snR54snR54 CCS1P40202 249 aaKnown RBP-0.09□□□□□ -2.42
snR54snR54 NSA2P40078 261 aaKnown RBP-0.1□□□□□ -2.43
snR54snR54 HHT1P61830 136 aa-0.1□□□□□ -2.43
snR54snR54 PRM3Q08931 133 aa-0.1□□□□□ -2.43
snR54snR54 YOR342CQ12182 319 aa-0.1□□□□□ -2.43
snR54snR54 RPS24AP0CX31 135 aaKnown RBP-0.11□□□□□ -2.43
snR54snR54 RPS24BP0CX32 135 aaKnown RBP-0.11□□□□□ -2.43
snR54snR54 CBF1P17106 351 aa-0.11□□□□□ -2.43
snR54snR54 TMA22P47089 198 aaPredicted RBP-0.11□□□□□ -2.43
snR54snR54 PGA2P53903 129 aa-0.11□□□□□ -2.43
snR54snR54 FCY1Q12178 158 aa-0.11□□□□□ -2.43
snR54snR54 MAK31P23059 88 aa-0.12□□□□□ -2.43
snR54snR54 NSG1P38837 291 aa-0.12□□□□□ -2.43
snR54snR54 YGL230CP53074 147 aa-0.12□□□□□ -2.43
snR54snR54 NRK1P53915 240 aa-0.12□□□□□ -2.43
snR54snR54 ARO80Q04052 950 aa-0.12□□□□□ -2.43
snR54snR54 GAL83Q04739 417 aa-0.12□□□□□ -2.43
snR54snR54 POG1P40473 351 aa-0.13□□□□□ -2.43
snR54snR54 YKR005CQ02203 525 aa-0.13□□□□□ -2.43
snR54snR54 RIM9Q04734 239 aa-0.13□□□□□ -2.43
snR54snR54 CDC39P25655 2108 aaKnown RBP-0.14□□□□□ -2.43
snR54snR54 YLR412C-AQ3E742 68 aa-0.14□□□□□ -2.43
snR54snR54 YOR381W-AQ3E804 55 aa-0.14□□□□□ -2.43
snR54snR54 ADE1P27616 306 aa-0.15□□□□□ -2.43
snR54snR54 CLG1P35190 452 aa-0.15□□□□□ -2.43
snR54snR54 MATALPHA2P0CY08 210 aa-0.16□□□□□ -2.44
snR54snR54 HMLALPHA2P0CY09 210 aa-0.16□□□□□ -2.44
snR54snR54 PRE1P22141 198 aaKnown RBP-0.16□□□□□ -2.44
snR54snR54 PGA1P53896 198 aa-0.16□□□□□ -2.44
snR54snR54 YOL024WQ08172 172 aa-0.16□□□□□ -2.44
snR54snR54 QCR7P00128 127 aa-0.17□□□□□ -2.44
snR54snR54 CPR5P35176 225 aa-0.17□□□□□ -2.44
snR54snR54 YPR014CQ6B0W2 109 aa-0.17□□□□□ -2.44
snR54snR54 LAA1P39526 2014 aa-0.18□□□□□ -2.44
snR54snR54 KIN28P06242 306 aa-0.18□□□□□ -2.44
snR54snR54 HSP30P25619 332 aa-0.18□□□□□ -2.44
snR54snR54 FYV4P38783 130 aaPredicted RBP-0.18□□□□□ -2.44
snR54snR54 ROM2P51862 1356 aaKnown RBP-0.19□□□□□ -2.44
snR54snR54 YRA2P36036 203 aaKnown RBP RIP-Chip data-0.19□□□□□ -2.44not detected
snR54snR54 CIN5P40917 295 aa-0.19□□□□□ -2.44
snR54snR54 AIM34Q03673 198 aa-0.19□□□□□ -2.44
snR54snR54 BLM10P43583 2143 aa-0.2□□□□□ -2.44
snR54snR54 RPL43AP0CX25 92 aaKnown RBP-0.2□□□□□ -2.44
snR54snR54 RPL43BP0CX26 92 aa-0.2□□□□□ -2.44
snR54snR54 MOB1P40484 314 aa-0.2□□□□□ -2.44
snR54snR54 RTC4P53850 401 aa-0.2□□□□□ -2.44
snR54snR54 VPS28Q02767 242 aa-0.2□□□□□ -2.44
snR54snR54 GRX5Q02784 150 aa-0.2□□□□□ -2.44
snR54snR54 YLR307C-AQ3E825 87 aa-0.2□□□□□ -2.44
snR54snR54 URA2P07259 2214 aaKnown RBP-0.21□□□□□ -2.44
snR54snR54 GCY1P14065 312 aaKnown RBP RIP-Chip data-0.21□□□□□ -2.44not detected
snR54snR54 TRX3P25372 127 aa-0.21□□□□□ -2.44
snR54snR54 MRPS17Q03246 237 aaPredicted RBP-0.21□□□□□ -2.44
snR54snR54 YDL157CQ12082 118 aa-0.21□□□□□ -2.44
snR54snR54 TAF2P23255 1407 aa-0.21□□□□□ -2.44
snR54snR54 TAH1P25638 111 aaPredicted RBP-0.22□□□□□ -2.44
snR54snR54 YNL122CP53921 115 aaPredicted RBP-0.22□□□□□ -2.44
snR54snR54 MGR2Q02889 113 aa-0.22□□□□□ -2.44
snR54snR54 NOC4Q06512 552 aaPredicted RBP-0.22□□□□□ -2.44
snR54snR54 MPD1Q12404 318 aaKnown RBP-0.22□□□□□ -2.44
snR54snR54 TAO3P40468 2376 aa-0.23□□□□□ -2.45
snR54snR54 SEC14P24280 304 aaKnown RBP-0.23□□□□□ -2.45
snR54snR54 YNL200CP40165 246 aaKnown RBP-0.23□□□□□ -2.45
snR54snR54 YMR141CP40211 102 aa-0.23□□□□□ -2.45
snR54snR54 YGR269WP40326 108 aa-0.23□□□□□ -2.45
snR54snR54 RNH1Q04740 348 aa-0.24□□□□□ -2.45
snR54snR54 YPR127WQ06494 345 aa-0.24□□□□□ -2.45
snR54snR54 HRD1Q08109 551 aa-0.24□□□□□ -2.45
snR54snR54 BRX1Q08235 291 aaKnown RBP-0.24□□□□□ -2.45
snR54snR54 VAM10Q08474 114 aa-0.24□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms