RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W YLR053CQ12026 108 aa1.66□□□□□ -2.14
MRPL40YPL173W FLO9P39712 1322 aa1.66□□□□□ -2.14
MRPL40YPL173W NSP1P14907 823 aaKnown RBP1.65□□□□□ -2.15
MRPL40YPL173W EDC3P39998 551 aaKnown RBP1.65□□□□□ -2.15
MRPL40YPL173W NSA2P40078 261 aaKnown RBP1.65□□□□□ -2.15
MRPL40YPL173W YPL073CP40323 161 aa1.65□□□□□ -2.15
MRPL40YPL173W GAL83Q04739 417 aa1.65□□□□□ -2.15
MRPL40YPL173W NSL1Q12143 216 aa1.65□□□□□ -2.15
MRPL40YPL173W YCR023CP25351 611 aa1.64□□□□□ -2.15
MRPL40YPL173W YHL018WP38744 120 aaPredicted RBP1.64□□□□□ -2.15
MRPL40YPL173W MPA43P53583 542 aaPredicted RBP1.64□□□□□ -2.15
MRPL40YPL173W PLP1Q04004 230 aa1.64□□□□□ -2.15
MRPL40YPL173W THI74Q04083 370 aa1.64□□□□□ -2.15
MRPL40YPL173W CSI2Q08054 341 aa1.64□□□□□ -2.15
MRPL40YPL173W PST2Q12335 198 aaKnown RBP1.64□□□□□ -2.15
MRPL40YPL173W UPS2P35200 230 aa1.63□□□□□ -2.15
MRPL40YPL173W RRT1P38192 103 aa1.63□□□□□ -2.15
MRPL40YPL173W DER1P38307 211 aa1.63□□□□□ -2.15
MRPL40YPL173W XPT1P47165 209 aa1.63□□□□□ -2.15
MRPL40YPL173W YGL235WP53071 178 aa1.63□□□□□ -2.15
MRPL40YPL173W DAD4P69851 72 aa1.63□□□□□ -2.15
MRPL40YPL173W YPR127WQ06494 345 aa1.63□□□□□ -2.15
MRPL40YPL173W STP22P25604 385 aa1.62□□□□□ -2.15
MRPL40YPL173W YBR220CP38318 560 aa1.62□□□□□ -2.15
MRPL40YPL173W SLM6P38343 150 aa1.62□□□□□ -2.15
MRPL40YPL173W YFH7P43591 353 aa1.62□□□□□ -2.15
MRPL40YPL173W BAT2P47176 376 aaKnown RBP1.62□□□□□ -2.15
MRPL40YPL173W SBH1P52870 82 aa1.62□□□□□ -2.15
MRPL40YPL173W YGL101WP53144 215 aa1.62□□□□□ -2.15
MRPL40YPL173W EFM5P53200 248 aaKnown RBP1.62□□□□□ -2.15
MRPL40YPL173W THG1P53215 237 aaKnown RBP1.62□□□□□ -2.15
MRPL40YPL173W YPR174CQ06616 221 aaPredicted RBP1.62□□□□□ -2.15
MRPL40YPL173W PRP11Q07350 266 aaPredicted RBP1.62□□□□□ -2.15
MRPL40YPL173W YPR013CQ12145 317 aa1.62□□□□□ -2.15
MRPL40YPL173W MDM35O60200 86 aa1.61□□□□□ -2.15
MRPL40YPL173W COX8P04039 78 aa1.61□□□□□ -2.15
MRPL40YPL173W UBI4P0CG63 381 aaKnown RBP1.61□□□□□ -2.15
MRPL40YPL173W YGL010WP25338 174 aa1.61□□□□□ -2.15
MRPL40YPL173W FIG1P38224 298 aa1.61□□□□□ -2.15
MRPL40YPL173W ORM1P53224 222 aa1.61□□□□□ -2.15
MRPL40YPL173W FIT2Q08906 153 aa1.61□□□□□ -2.15
MRPL40YPL173W YOR214CQ12282 236 aa1.61□□□□□ -2.15
MRPL40YPL173W RPL2AP0CX45 254 aaKnown RBP1.6□□□□□ -2.15
MRPL40YPL173W RPL2BP0CX46 254 aaKnown RBP1.6□□□□□ -2.15
MRPL40YPL173W NUF2P33895 451 aa1.6□□□□□ -2.15
MRPL40YPL173W RPL13BP40212 199 aaKnown RBP1.6□□□□□ -2.15
MRPL40YPL173W YKR005CQ02203 525 aa1.6□□□□□ -2.15
MRPL40YPL173W YPR202WQ08993 238 aa1.6□□□□□ -2.15
MRPL40YPL173W RPL13AQ12690 199 aaPredicted RBP1.6□□□□□ -2.15
MRPL40YPL173W YOR381W-AQ3E804 55 aa1.6□□□□□ -2.15
MRPL40YPL173W RPS28BP0C0X0 67 aaKnown RBP1.59□□□□□ -2.15
MRPL40YPL173W HSP30P25619 332 aa1.59□□□□□ -2.15
MRPL40YPL173W TMA20P89886 181 aaPredicted RBP1.59□□□□□ -2.15
MRPL40YPL173W VPS28Q02767 242 aa1.59□□□□□ -2.15
MRPL40YPL173W YOR015WQ12169 119 aa1.59□□□□□ -2.15
MRPL40YPL173W EFG1Q3E705 233 aaKnown RBP1.59□□□□□ -2.15
MRPL40YPL173W RPS28AQ3E7X9 67 aaPredicted RBP1.59□□□□□ -2.15
MRPL40YPL173W PET20Q99373 253 aa1.59□□□□□ -2.15
MRPL40YPL173W MSB2P32334 1306 aa1.59□□□□□ -2.16
MRPL40YPL173W YOL162WP0CF19 215 aa1.58□□□□□ -2.16
MRPL40YPL173W GPA2P10823 449 aa1.58□□□□□ -2.16
MRPL40YPL173W NSE4P43124 402 aa1.58□□□□□ -2.16
MRPL40YPL173W LSM3P57743 89 aaKnown RBP1.58□□□□□ -2.16
MRPL40YPL173W MAK3Q03503 176 aa1.58□□□□□ -2.16
MRPL40YPL173W RIM9Q04734 239 aa1.58□□□□□ -2.16
MRPL40YPL173W YHR007C-AQ07074 71 aa1.58□□□□□ -2.16
MRPL40YPL173W YLR046CQ12253 270 aa1.58□□□□□ -2.16
MRPL40YPL173W QCR8P08525 94 aa1.57□□□□□ -2.16
MRPL40YPL173W GSP2P32836 220 aaKnown RBP1.57□□□□□ -2.16
MRPL40YPL173W SFK1P35735 353 aa1.57□□□□□ -2.16
MRPL40YPL173W MPM1P40364 252 aa1.57□□□□□ -2.16
MRPL40YPL173W FLX1P40464 311 aa1.57□□□□□ -2.16
MRPL40YPL173W GLR1P41921 483 aaKnown RBP1.57□□□□□ -2.16
MRPL40YPL173W YAE1P47118 141 aaPredicted RBP1.57□□□□□ -2.16
MRPL40YPL173W TIM13P53299 105 aa1.57□□□□□ -2.16
MRPL40YPL173W DML1Q03652 475 aa1.57□□□□□ -2.16
MRPL40YPL173W UPS1Q05776 175 aa1.57□□□□□ -2.16
MRPL40YPL173W RAD6P06104 172 aa1.56□□□□□ -2.16
MRPL40YPL173W UBC8P28263 218 aa1.56□□□□□ -2.16
MRPL40YPL173W YEL073CP39974 107 aa1.56□□□□□ -2.16
MRPL40YPL173W HPA3P39979 161 aa1.56□□□□□ -2.16
MRPL40YPL173W YEL028WP39989 153 aa1.56□□□□□ -2.16
MRPL40YPL173W ALB1P47019 175 aaPredicted RBP1.56□□□□□ -2.16
MRPL40YPL173W SBH2P52871 88 aa1.56□□□□□ -2.16
MRPL40YPL173W PIR1Q03178 341 aa1.56□□□□□ -2.16
MRPL40YPL173W YHP1Q04116 353 aa1.56□□□□□ -2.16
MRPL40YPL173W SYM1Q06563 197 aa1.56□□□□□ -2.16
MRPL40YPL173W ATP5P09457 212 aa1.55□□□□□ -2.16
MRPL40YPL173W RPL30P14120 105 aaKnown RBP1.55□□□□□ -2.16
MRPL40YPL173W FPR1P20081 114 aaKnown RBP1.55□□□□□ -2.16
MRPL40YPL173W BUB2P26448 306 aaPredicted RBP1.55□□□□□ -2.16
MRPL40YPL173W APQ12P40532 138 aa1.55□□□□□ -2.16
MRPL40YPL173W HYR1P40581 163 aaKnown RBP1.55□□□□□ -2.16
MRPL40YPL173W PAC10P48363 199 aa1.55□□□□□ -2.16
MRPL40YPL173W RRP17Q04031 235 aaPredicted RBP1.55□□□□□ -2.16
MRPL40YPL173W YMR252CQ04814 134 aa1.55□□□□□ -2.16
MRPL40YPL173W ATG41Q12048 136 aa1.55□□□□□ -2.16
MRPL40YPL173W RPB7P34087 171 aa1.54□□□□□ -2.16
MRPL40YPL173W YRA2P36036 203 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
MRPL40YPL173W RIO2P40160 425 aaKnown RBP1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 115.6 ms