RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C YLR122CQ12312 125 aa5.59□□□□□ -1.51
UME1YPL139C COA2Q3E823 68 aa5.59□□□□□ -1.51
UME1YPL139C URA5P13298 226 aaKnown RBP5.58□□□□□ -1.52
UME1YPL139C AUA1P32450 94 aa5.58□□□□□ -1.52
UME1YPL139C LAG1P38703 411 aa5.58□□□□□ -1.52
UME1YPL139C YGR210CP42942 411 aa5.58□□□□□ -1.52
UME1YPL139C MRPS16Q02608 121 aa5.58□□□□□ -1.52
UME1YPL139C YOL029CQ08187 201 aa5.58□□□□□ -1.52
UME1YPL139C POC4Q12245 148 aaPredicted RBP5.58□□□□□ -1.52
UME1YPL139C TRM13Q12383 476 aa5.58□□□□□ -1.52
UME1YPL139C TAR1Q8TGM6 124 aa5.58□□□□□ -1.52
UME1YPL139C MRS3P10566 314 aa5.57□□□□□ -1.52
UME1YPL139C LSM12P38828 187 aaKnown RBP5.57□□□□□ -1.52
UME1YPL139C BUL1P48524 976 aa5.57□□□□□ -1.52
UME1YPL139C HCH1P53834 153 aa5.57□□□□□ -1.52
UME1YPL139C YLR224WQ05947 369 aa5.57□□□□□ -1.52
UME1YPL139C PRM3Q08931 133 aa5.57□□□□□ -1.52
UME1YPL139C YGL258W-AQ3E740 77 aa5.57□□□□□ -1.52
UME1YPL139C ELO2P25358 347 aa5.56□□□□□ -1.52
UME1YPL139C TIP1P27654 210 aaPredicted RBP5.56□□□□□ -1.52
UME1YPL139C YBR144CP34215 104 aa5.56□□□□□ -1.52
UME1YPL139C YKL162CP36052 402 aa5.56□□□□□ -1.52
UME1YPL139C POP7P38291 140 aa5.56□□□□□ -1.52
UME1YPL139C YIR035CP40579 254 aa5.56□□□□□ -1.52
UME1YPL139C HAM1P47119 197 aaKnown RBP5.56□□□□□ -1.52
UME1YPL139C YGL185CP53100 379 aa5.56□□□□□ -1.52
UME1YPL139C CAX4P53223 239 aa5.56□□□□□ -1.52
UME1YPL139C YNR071CP53757 342 aa5.56□□□□□ -1.52
UME1YPL139C RXT3Q07458 294 aa5.56□□□□□ -1.52
UME1YPL139C PAM18Q07914 168 aa5.56□□□□□ -1.52
UME1YPL139C Q0142Q9ZZW4 58 aa5.56□□□□□ -1.52
UME1YPL139C RPP1AP05318 106 aaPredicted RBP5.55□□□□□ -1.52
UME1YPL139C TY1A-LR4P0C2I8 440 aaKnown RBP5.55□□□□□ -1.52
UME1YPL139C TY1A-DR6P0CX70 440 aa5.55□□□□□ -1.52
UME1YPL139C TY1A-ER1P0CX71 440 aa5.55□□□□□ -1.52
UME1YPL139C TY1A-LR2P0CX72 440 aa5.55□□□□□ -1.52
UME1YPL139C TY1A-PLP0CX73 440 aa5.55□□□□□ -1.52
UME1YPL139C TY1A-JR1P0CX74 440 aa5.55□□□□□ -1.52
UME1YPL139C TY1A-LR3P0CX75 440 aa5.55□□□□□ -1.52
UME1YPL139C TY1A-ML2P0CX76 440 aa5.55□□□□□ -1.52
UME1YPL139C UTR5P32630 166 aa5.55□□□□□ -1.52
UME1YPL139C YKL075CP36083 450 aa5.55□□□□□ -1.52
UME1YPL139C SNU13P39990 126 aaKnown RBP5.55□□□□□ -1.52
UME1YPL139C CPD1P53314 239 aa5.55□□□□□ -1.52
UME1YPL139C FRQ1Q06389 190 aa5.55□□□□□ -1.52
UME1YPL139C RRT7Q07829 113 aa5.55□□□□□ -1.52
UME1YPL139C TY1A-GR1Q12085 440 aa5.55□□□□□ -1.52
UME1YPL139C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.55□□□□□ -1.52
UME1YPL139C TY1A-OLQ92392 440 aaKnown RBP5.55□□□□□ -1.52
UME1YPL139C DFR1P07807 211 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
UME1YPL139C MRPL4P36517 319 aa5.55□□□□□ -1.52
UME1YPL139C MIC12P38341 106 aa5.55□□□□□ -1.52
UME1YPL139C MRPL49P40858 161 aaPredicted RBP5.55□□□□□ -1.52
UME1YPL139C YGR018CP53211 109 aa5.55□□□□□ -1.52
UME1YPL139C COX18P53239 316 aa5.55□□□□□ -1.52
UME1YPL139C CAB4P53332 305 aa5.55□□□□□ -1.52
UME1YPL139C YIF1P53845 314 aaKnown RBP5.55□□□□□ -1.52
UME1YPL139C SWT21P53873 357 aaPredicted RBP5.55□□□□□ -1.52
UME1YPL139C LRS4Q04087 347 aaKnown RBP5.55□□□□□ -1.52
UME1YPL139C DIF1O13577 133 aa5.54□□□□□ -1.52
UME1YPL139C TRP4P07285 380 aaPredicted RBP5.54□□□□□ -1.52
UME1YPL139C SIP1P32578 815 aa5.54□□□□□ -1.52
UME1YPL139C YRA2P36036 203 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
UME1YPL139C GLE2P40066 365 aa5.54□□□□□ -1.52
UME1YPL139C YER137CP40083 148 aaKnown RBP5.54□□□□□ -1.52
UME1YPL139C YNL194CP40169 301 aa5.54□□□□□ -1.52
UME1YPL139C ECM27P47144 725 aa5.54□□□□□ -1.52
UME1YPL139C ERG25P53045 309 aa5.54□□□□□ -1.52
UME1YPL139C SSU72P53538 206 aaPredicted RBP5.54□□□□□ -1.52
UME1YPL139C ACT1P60010 375 aaKnown RBP5.54□□□□□ -1.52
UME1YPL139C GRH1Q04410 372 aaKnown RBP5.54□□□□□ -1.52
UME1YPL139C TRI1Q05024 226 aa5.54□□□□□ -1.52
UME1YPL139C AIM45Q12480 344 aaKnown RBP5.54□□□□□ -1.52
UME1YPL139C YBR182C-AQ8TGU6 64 aa5.54□□□□□ -1.52
UME1YPL139C RPL11AP0C0W9 174 aaKnown RBP5.53□□□□□ -1.52
UME1YPL139C GRX2P17695 143 aaKnown RBP5.53□□□□□ -1.52
UME1YPL139C SEC22P22214 214 aa5.53□□□□□ -1.52
UME1YPL139C SUR2P38992 349 aa5.53□□□□□ -1.52
UME1YPL139C NSA2P40078 261 aaKnown RBP5.53□□□□□ -1.52
UME1YPL139C YJL027CP47063 138 aaPredicted RBP5.53□□□□□ -1.52
UME1YPL139C YPL264CQ08980 353 aa5.53□□□□□ -1.52
UME1YPL139C ATG31Q12421 196 aa5.53□□□□□ -1.52
UME1YPL139C RPL11BQ3E757 174 aaPredicted RBP5.53□□□□□ -1.52
UME1YPL139C CKS1P20486 150 aaKnown RBP5.52□□□□□ -1.53
UME1YPL139C YCR022CP25620 114 aa5.52□□□□□ -1.53
UME1YPL139C QDR3P38227 689 aa5.52□□□□□ -1.53
UME1YPL139C YPC1P38298 316 aa5.52□□□□□ -1.53
UME1YPL139C FLO5P38894 1075 aa5.52□□□□□ -1.53
UME1YPL139C YGR025WP53216 100 aa5.52□□□□□ -1.53
UME1YPL139C RAD28Q12021 506 aa5.52□□□□□ -1.53
UME1YPL139C YPS3Q12303 508 aa5.52□□□□□ -1.53
UME1YPL139C PAA1Q12447 191 aaKnown RBP5.52□□□□□ -1.53
UME1YPL139C CYC3P06182 269 aa5.51□□□□□ -1.53
UME1YPL139C FCY2P17064 533 aa5.51□□□□□ -1.53
UME1YPL139C YCR025CP25352 136 aa5.51□□□□□ -1.53
UME1YPL139C DOG2P38773 246 aa5.51□□□□□ -1.53
UME1YPL139C DOG1P38774 246 aa5.51□□□□□ -1.53
UME1YPL139C PET100P38958 111 aa5.51□□□□□ -1.53
UME1YPL139C HXT14P42833 540 aa5.51□□□□□ -1.53
UME1YPL139C YNG1Q08465 219 aa5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 63.9 ms