RNA–Protein interactions for RNA: YPL011C

TAF3, Transcript of TFIID subunit (47 kDa), yeast

Gene TAF3, Length 1,062 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TAF3	YPL011C	PET9	P18239	318 aa	Known RBP	2.68	□□□□□ -1.98
TAF3	YPL011C	FUN14	P18411	198 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	PEX34	P25584	144 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	DAL80	P26343	269 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	RFA3	P26755	122 aa	Known RBP	2.68	□□□□□ -1.98
TAF3	YPL011C	SRY1	P36007	326 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	YOR062C	P36025	268 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	RPS20	P38701	121 aa	Known RBP	2.68	□□□□□ -1.98
TAF3	YPL011C	DLS1	P40366	167 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	UFD1	P53044	361 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	YGL235W	P53071	178 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	YGL159W	P53110	370 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	YGR017W	P53210	297 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	GRX5	Q02784	150 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	OST6	Q03723	332 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	RNH202	Q05635	350 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	YLR179C	Q06252	201 aa	Known RBP	2.68	□□□□□ -1.98
TAF3	YPL011C	FRQ1	Q06389	190 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	CTR3	Q06686	241 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	FCF2	Q12035	217 aa	Predicted RBP	2.68	□□□□□ -1.98
TAF3	YPL011C	POM33	Q12164	279 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	TFC7	Q12415	435 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	SNF8	Q12483	233 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	YGL194C-A	Q2V2P6	80 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	COX19	Q3E731	98 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	YLR099W-A	Q3E798	87 aa		2.68	□□□□□ -1.98
TAF3	YPL011C	TIM9	O74700	87 aa		2.67	□□□□□ -1.98
TAF3	YPL011C	RPL4A	P10664	362 aa	Known RBP	2.67	□□□□□ -1.98
TAF3	YPL011C	ANB1	P19211	157 aa		2.67	□□□□□ -1.98
TAF3	YPL011C	SEC22	P22214	214 aa		2.67	□□□□□ -1.98
TAF3	YPL011C	PPH21	P23594	369 aa		2.67	□□□□□ -1.98
TAF3	YPL011C	PET18	P25362	215 aa		2.67	□□□□□ -1.98
TAF3	YPL011C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
TAF3	YPL011C	PRP18	P33411	251 aa	Predicted RBP	2.67	□□□□□ -1.98
TAF3	YPL011C	YEA4	P40004	342 aa		2.67	□□□□□ -1.98
TAF3	YPL011C	YIL012W	P40551	113 aa		2.67	□□□□□ -1.98
TAF3	YPL011C	YFR045W	P43617	309 aa		2.67	□□□□□ -1.98
TAF3	YPL011C	RPL4B	P49626	362 aa	Known RBP	2.67	□□□□□ -1.98
TAF3	YPL011C	RSM27	P53305	110 aa		2.67	□□□□□ -1.98
TAF3	YPL011C	APS2	Q00381	147 aa		2.67	□□□□□ -1.98
TAF3	YPL011C	CYT2	Q00873	224 aa		2.67	□□□□□ -1.98
TAF3	YPL011C	TRM44	Q02648	567 aa	Known RBP	2.67	□□□□□ -1.98
TAF3	YPL011C	YMR166C	Q03829	368 aa		2.67	□□□□□ -1.98
TAF3	YPL011C	YPR098C	Q06089	161 aa		2.67	□□□□□ -1.98
TAF3	YPL011C	PAU23	Q07987	124 aa		2.67	□□□□□ -1.98
TAF3	YPL011C	PAU17	Q12370	124 aa		2.67	□□□□□ -1.98
TAF3	YPL011C	MSB2	P32334	1306 aa		2.67	□□□□□ -1.98
TAF3	YPL011C	CPA1	P07258	411 aa	Known RBP	2.66	□□□□□ -1.98
TAF3	YPL011C	RPS25B	P0C0T4	108 aa	Known RBP	2.66	□□□□□ -1.98
TAF3	YPL011C	URA6	P15700	204 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	YPS1	P32329	569 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	MRP49	P32388	137 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	TCA17	P32613	152 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	SGE1	P33335	543 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	MSN4	P33749	630 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	GPX1	P36014	167 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	MRPL28	P36527	147 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	SLM6	P38343	150 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	VMA21	P41806	77 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	PAU5	P43575	122 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	RIB4	P50861	169 aa	Predicted RBP	2.66	□□□□□ -1.98
TAF3	YPL011C	YGR042W	P53227	271 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	CTF19	Q02732	369 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	RCE1	Q03530	315 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	YML079W	Q03629	201 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	YDR248C	Q03786	193 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	TAZ1	Q06510	381 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	YPR174C	Q06616	221 aa	Predicted RBP	2.66	□□□□□ -1.98
TAF3	YPL011C	ATG10	Q07879	167 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	SCP1	Q08873	200 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	YCT1	Q12235	531 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	PEX11	Q12462	236 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	RPS25A	Q3E792	108 aa	Predicted RBP	2.66	□□□□□ -1.98
TAF3	YPL011C	PET20	Q99373	253 aa		2.66	□□□□□ -1.98
TAF3	YPL011C	COX5B	P00425	151 aa		2.65	□□□□□ -1.99
TAF3	YPL011C	QCR2	P07257	368 aa		2.65	□□□□□ -1.99
TAF3	YPL011C	RPC40	P07703	335 aa	Known RBP	2.65	□□□□□ -1.99
TAF3	YPL011C	PRE1	P22141	198 aa	Known RBP	2.65	□□□□□ -1.99
TAF3	YPL011C	AME1	P38313	324 aa		2.65	□□□□□ -1.99
TAF3	YPL011C	CUE1	P38428	203 aa		2.65	□□□□□ -1.99
TAF3	YPL011C	FYV4	P38783	130 aa	Predicted RBP	2.65	□□□□□ -1.99
TAF3	YPL011C	RPB11	P38902	120 aa		2.65	□□□□□ -1.99
TAF3	YPL011C	RFC2	P40348	353 aa		2.65	□□□□□ -1.99
TAF3	YPL011C	CAT5	P41735	233 aa		2.65	□□□□□ -1.99
TAF3	YPL011C	YJR012C	P47087	207 aa		2.65	□□□□□ -1.99
TAF3	YPL011C	XPT1	P47165	209 aa		2.65	□□□□□ -1.99
TAF3	YPL011C	SPG3	Q04398	127 aa	Predicted RBP	2.65	□□□□□ -1.99
TAF3	YPL011C	YMR253C	Q04835	414 aa		2.65	□□□□□ -1.99
TAF3	YPL011C	YPR114W	Q06107	315 aa		2.65	□□□□□ -1.99
TAF3	YPL011C	CTS2	Q06350	511 aa		2.65	□□□□□ -1.99
TAF3	YPL011C	YOR292C	Q08743	309 aa		2.65	□□□□□ -1.99
TAF3	YPL011C	YPR145C-A	Q2V2P0	78 aa		2.65	□□□□□ -1.99
TAF3	YPL011C	YNR034W-A	Q3E841	98 aa		2.65	□□□□□ -1.99
TAF3	YPL011C	RIF1	P29539	1916 aa		2.65	□□□□□ -1.99
TAF3	YPL011C	UBR2	Q07963	1872 aa		2.65	□□□□□ -1.99
TAF3	YPL011C	MSW1	P04803	379 aa		2.64	□□□□□ -1.99
TAF3	YPL011C	YOL162W	P0CF19	215 aa		2.64	□□□□□ -1.99
TAF3	YPL011C	GSP1	P32835	219 aa	Known RBP	2.64	□□□□□ -1.99
TAF3	YPL011C	GSP2	P32836	220 aa	Known RBP	2.64	□□□□□ -1.99
TAF3	YPL011C	SNC2	P33328	115 aa		2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 74.2 ms