RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W TMA23Q03525 211 aa6.88□□□□□ -1.31
AMF1YOR378W SDO1Q07953 250 aaKnown RBP6.88□□□□□ -1.31
AMF1YOR378W SOD1P00445 154 aaKnown RBP6.87□□□□□ -1.31
AMF1YOR378W ELO2P25358 347 aa6.87□□□□□ -1.31
AMF1YOR378W LDS1P31379 325 aa6.87□□□□□ -1.31
AMF1YOR378W YER188WP40103 239 aa6.87□□□□□ -1.31
AMF1YOR378W MCM22P47167 239 aa6.87□□□□□ -1.31
AMF1YOR378W CAF40P53829 373 aa6.87□□□□□ -1.31
AMF1YOR378W BOR1P53838 576 aa6.87□□□□□ -1.31
AMF1YOR378W ARR3Q06598 404 aa6.87□□□□□ -1.31
AMF1YOR378W YOR097CQ12274 175 aaPredicted RBP6.87□□□□□ -1.31
AMF1YOR378W POM34Q12445 299 aa6.87□□□□□ -1.31
AMF1YOR378W VMA9Q3E7B6 73 aa6.87□□□□□ -1.31
AMF1YOR378W FEN2P25621 512 aaKnown RBP6.86□□□□□ -1.31
AMF1YOR378W ACP1P32463 125 aa6.86□□□□□ -1.31
AMF1YOR378W QDR3P38227 689 aa6.86□□□□□ -1.31
AMF1YOR378W FLO5P38894 1075 aa6.86□□□□□ -1.31
AMF1YOR378W SMD3P43321 101 aaKnown RBP6.86□□□□□ -1.31
AMF1YOR378W RIB4P50861 169 aaPredicted RBP6.86□□□□□ -1.31
AMF1YOR378W SRL1Q08673 210 aa6.86□□□□□ -1.31
AMF1YOR378W PAA1Q12447 191 aaKnown RBP6.86□□□□□ -1.31
AMF1YOR378W YBL059WP34224 193 aa6.86□□□□□ -1.31
AMF1YOR378W RIB5P38145 238 aa6.86□□□□□ -1.31
AMF1YOR378W YBL071CP38185 102 aa6.86□□□□□ -1.31
AMF1YOR378W MIC27P50945 234 aa6.86□□□□□ -1.31
AMF1YOR378W YHP1Q04116 353 aa6.86□□□□□ -1.31
AMF1YOR378W POS5Q06892 414 aa6.86□□□□□ -1.31
AMF1YOR378W CCW14O13547 238 aa6.85□□□□□ -1.31
AMF1YOR378W GPP2P40106 250 aaKnown RBP6.85□□□□□ -1.31
AMF1YOR378W CTR3Q06686 241 aa6.85□□□□□ -1.31
AMF1YOR378W PIS1P06197 220 aaKnown RBP6.84□□□□□ -1.31
AMF1YOR378W MRPL38P35996 138 aaPredicted RBP6.84□□□□□ -1.31
AMF1YOR378W YAR068WP39564 161 aa6.84□□□□□ -1.31
AMF1YOR378W BDH1P39714 382 aa6.84□□□□□ -1.31
AMF1YOR378W YMR007WQ03675 126 aa6.84□□□□□ -1.31
AMF1YOR378W SHH3Q04487 196 aa6.84□□□□□ -1.31
AMF1YOR378W AVO2Q04749 426 aa6.84□□□□□ -1.31
AMF1YOR378W DAL3P32459 195 aa6.83□□□□□ -1.32
AMF1YOR378W PRS4P38063 326 aaPredicted RBP6.83□□□□□ -1.32
AMF1YOR378W DER1P38307 211 aa6.83□□□□□ -1.32
AMF1YOR378W DOG2P38773 246 aa6.83□□□□□ -1.32
AMF1YOR378W DOG1P38774 246 aa6.83□□□□□ -1.32
AMF1YOR378W PTC7P38797 343 aa6.83□□□□□ -1.32
AMF1YOR378W TIF11P38912 153 aaKnown RBP6.83□□□□□ -1.32
AMF1YOR378W SAS2P40963 338 aa6.83□□□□□ -1.32
AMF1YOR378W SME1Q12330 94 aaPredicted RBP6.83□□□□□ -1.32
AMF1YOR378W YMR316C-AI2HB70 103 aa6.82□□□□□ -1.32
AMF1YOR378W YKL075CP36083 450 aa6.82□□□□□ -1.32
AMF1YOR378W AVT5P38176 459 aa6.82□□□□□ -1.32
AMF1YOR378W CDS1P38221 457 aa6.82□□□□□ -1.32
AMF1YOR378W CSH1P38287 376 aa6.82□□□□□ -1.32
AMF1YOR378W WWM1P43582 211 aaKnown RBP6.82□□□□□ -1.32
AMF1YOR378W GNP1P48813 663 aa6.82□□□□□ -1.32
AMF1YOR378W YGR018CP53211 109 aa6.82□□□□□ -1.32
AMF1YOR378W LST7P53237 242 aa6.82□□□□□ -1.32
AMF1YOR378W PAU4P53427 120 aa6.82□□□□□ -1.32
AMF1YOR378W Q0142Q9ZZW4 58 aa6.82□□□□□ -1.32
AMF1YOR378W YCR022CP25620 114 aa6.81□□□□□ -1.32
AMF1YOR378W ALK2P32789 676 aaPredicted RBP6.81□□□□□ -1.32
AMF1YOR378W RPL14AP36105 138 aaKnown RBP6.81□□□□□ -1.32
AMF1YOR378W RRT1P38192 103 aa6.81□□□□□ -1.32
AMF1YOR378W RPL14BP38754 138 aaKnown RBP6.81□□□□□ -1.32
AMF1YOR378W TAX4P47030 604 aa6.81□□□□□ -1.32
AMF1YOR378W ATC1Q04005 294 aa6.81□□□□□ -1.32
AMF1YOR378W PBP4Q07362 185 aaKnown RBP6.81□□□□□ -1.32
AMF1YOR378W DFR1P07807 211 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
AMF1YOR378W YPS1P32329 569 aa6.81□□□□□ -1.32
AMF1YOR378W YIL024CP40543 189 aa6.81□□□□□ -1.32
AMF1YOR378W RTS2P40962 232 aa6.81□□□□□ -1.32
AMF1YOR378W SDH7Q04401 133 aa6.81□□□□□ -1.32
AMF1YOR378W RXT3Q07458 294 aa6.81□□□□□ -1.32
AMF1YOR378W YOR352WQ08816 343 aa6.81□□□□□ -1.32
AMF1YOR378W PAU1P0CE88 120 aa6.8□□□□□ -1.32
AMF1YOR378W PAU14P0CE89 120 aa6.8□□□□□ -1.32
AMF1YOR378W PAU6P0CE90 120 aa6.8□□□□□ -1.32
AMF1YOR378W PAU18P0CE91 120 aa6.8□□□□□ -1.32
AMF1YOR378W PAU8P0CE92 120 aa6.8□□□□□ -1.32
AMF1YOR378W PAU11P0CE93 120 aa6.8□□□□□ -1.32
AMF1YOR378W INO2P26798 304 aa6.8□□□□□ -1.32
AMF1YOR378W PAU13P38725 120 aa6.8□□□□□ -1.32
AMF1YOR378W PAU10Q03050 120 aa6.8□□□□□ -1.32
AMF1YOR378W SPG4Q04438 115 aa6.8□□□□□ -1.32
AMF1YOR378W PAU20Q08322 120 aa6.8□□□□□ -1.32
AMF1YOR378W TY1A-DR3Q12441 440 aa6.8□□□□□ -1.32
AMF1YOR378W PAU9Q3E770 120 aa6.8□□□□□ -1.32
AMF1YOR378W PCC1Q3E833 88 aa6.8□□□□□ -1.32
AMF1YOR378W POG1P40473 351 aa6.79□□□□□ -1.32
AMF1YOR378W IRC23Q08416 157 aa6.79□□□□□ -1.32
AMF1YOR378W TDH1P00360 332 aaKnown RBP6.78□□□□□ -1.32
AMF1YOR378W CDC7P06243 507 aa6.78□□□□□ -1.32
AMF1YOR378W SWT21P53873 357 aaPredicted RBP6.78□□□□□ -1.32
AMF1YOR378W MRP2P10663 115 aaPredicted RBP6.77□□□□□ -1.33
AMF1YOR378W CNB1P25296 175 aa6.77□□□□□ -1.33
AMF1YOR378W YCR041WP37265 110 aa6.77□□□□□ -1.33
AMF1YOR378W SFT2P38166 215 aa6.77□□□□□ -1.33
AMF1YOR378W LOC1P43586 204 aaPredicted RBP6.77□□□□□ -1.33
AMF1YOR378W ATG27P46989 271 aa6.77□□□□□ -1.33
AMF1YOR378W VPS55P47111 140 aa6.77□□□□□ -1.33
AMF1YOR378W HAM1P47119 197 aaKnown RBP6.77□□□□□ -1.33
AMF1YOR378W YGR219WP53307 113 aa6.77□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms